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Information on EC 3.2.1.22 - alpha-galactosidase and Organism(s) Oryza sativa and UniProt Accession Q9FXT4

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IUBMB Comments
Also hydrolyses alpha-D-fucosides.
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This record set is specific for:
Oryza sativa
UNIPROT: Q9FXT4
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Word Map
The taxonomic range for the selected organisms is: Oryza sativa
The enzyme appears in selected viruses and cellular organisms
Synonyms
alpha-galactosidase, alpha-galactosidase a, alpha-gal, alpha-gal a, agalsidase alfa, genzyme, alpha-d-galactosidase, a-galactosidase, fabrazyme, alpha-galactosidase i, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Agalsidase alfa
-
-
-
-
AkalphaGal
-
-
alkaline alpha-galactosidase
-
-
alpha-D-galactosidase
-
-
-
-
Alpha-D-galactoside galactohydrolase
-
-
-
-
alpha-Gal II
-
-
alpha-Gal III
-
alpha-galactosidase A
-
-
-
-
alpha-galactosidase II
-
-
alpha-galactosidase III
-
alpha-galactoside galactohydrolase
ceramidase, galactosylgalactosylglucosyl-
-
-
-
-
ceramide trihexosidase
-
-
-
-
ceramidetrihexosidase
-
-
-
-
ceramidetrihexoside-alpha-galactosidase
-
-
-
-
melibiase
-
-
-
-
trihexosyl ceramide galactosidase
-
-
-
-
trihexosylceramide alpha-galactosidase
-
-
-
-
trihexosylceramidealpha-galactosidase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
hydrolysis of O-glycosyl bond
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
alpha-D-galactoside galactohydrolase
Also hydrolyses alpha-D-fucosides.
CAS REGISTRY NUMBER
COMMENTARY hide
9023-01-2
-
9025-35-8
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
alpha-D-galactopyranosyl-(1-6)-O-beta-D-mannopyranosyl-(1-4)-D-mannopyranosyl-(1-4)-D-mannopyranose + H2O
alpha-D-galactose + beta-D-mannopyranosyl-(1-4)-D-mannopyranosyl-(1-4)-D-mannopyranose
show the reaction diagram
-
-
-
?
melibiose + H2O
alpha-D-galactose + alpha-D-glucose
show the reaction diagram
-
-
-
?
O-beta-D-mannopyranosyl-(1-4)-O-[alpha-D-galactopyranosyl-(1-6)]-O-beta-D-mannopyranosyl-(1-4)-D-mannopyranosyl-(1-4)-D-mannopyranose + H2O
?
show the reaction diagram
-
-
-
?
p-nitrophenyl alpha-D-galactopyranoside + H2O
p-nitrophenol + alpha-D-galactose
show the reaction diagram
-
-
-
?
raffinose + H2O
sucrose + alpha-D-galactose
show the reaction diagram
-
-
-
?
stachyose + 2 H2O
2 alpha-D-galactose + sucrose
show the reaction diagram
-
-
-
?
6(1)-alpha-D-galactosyl mannobiose + H2O
?
show the reaction diagram
6(1)-alpha-D-galactosyl mannotriose + H2O
?
show the reaction diagram
6(3),6(4)-di-alpha-D-galactosyl mannopentaose + H2O
?
show the reaction diagram
digalactosyl diacylglycerol + H2O
?
show the reaction diagram
-
-
-
-
?
guar gum + H2O
?
show the reaction diagram
locust bean gum + H2O
?
show the reaction diagram
melibiose + H2O
D-galactose + D-glucose
show the reaction diagram
p-nitrophenyl alpha-D-galactoside + H2O
p-nitrophenol + alpha-D-galactose
show the reaction diagram
100% activity
-
-
?
raffinose + H2O
sucrose + alpha-D-galactose
show the reaction diagram
stachyose + 2 H2O
2 alpha-D-galactose + sucrose
show the reaction diagram
stachyose + H2O
raffinose + D-galactose
show the reaction diagram
-
-
-
-
?
verbascose + H2O
alpha-D-galactose + alpha-D-glucopyranosyl-(1,2)-beta-D-fructofuranoside
show the reaction diagram
-
-
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Ag2+
1 mM, 46% inhibition
Hg2+
1 mM, 98% inhibition
PCMB
1 mM, 98% inhibition
p-chloromercuribenzoate
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2
digalactosyl diacylglycerol
-
at 37°C, pH 8.6
25.4
melibiose
-
at 37°C, pH 8.6
18
raffinose
-
at 37°C, pH 8.6
7.8
stachyose
-
at 37°C, pH 8.6
4.2
verbascose
-
at 37°C, pH 8.6
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
0.31
alpha-Gal III, crude extract
2.25
alpha-Gal II, crude extract
52.8
alpha-Gal II, after 23.5fold purification
9.13
alpha-Gal III, after 29.5fold purification
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
45
activity with p-nitrophenyl alpha-D-galactopyranoside
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
-
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
-
AkalphaGal is a thylakoid membrane-degrading enzyme involved in the degradation of digalactosyl diacylglycerol during rice leaf senescence
PDB
SCOP
CATH
UNIPROT
ORGANISM
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
39950
1 * 39950, calculation from nucleotide sequence
40000
gel filtration
41000
1 * 41000, SDS-PAGE
41020
calculated from amino acid sequence
41520
calculated from amino acid sequence
42000
SDS-PAGE
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
monomer
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
hanging-drop vapor diffusion method, crystal structure determined at 1.5 A resolution
-
pH STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
3 - 8
inactivation below pH 3 and above pH 8
656949
3.5 - 8.5
alpha-Gal II is stable at pH 3.5-8.5 at 25°C
678818
4 - 7
alpha-Gal III is stable at pH 4.0-7.0 at 20°C
678818
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
40
inactivation above
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
Ni2+-Sepharose column chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expressed in Escherichia coli strain Origami (DE)
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Fujimoto, Z.; Kaneko, S.; Momma, M.; Kobayashi, H.; Mizuno, H.
Crystal structure of rice alpha-galactosidase complexed with D-galactose
J. Biol. Chem.
278
20313-20318
2003
Oryza sativa
Manually annotated by BRENDA team
Kim, W.D.; Kobayashi, O.; Kaneko, S.; Sakakibara, Y.; Park, G.G.; Kusakabe, I.; Tanaka, H.; Kobayashi, H.
alpha-Galactosidase from cultured rice (Oryza sativa L. var. Nipponbare) cells
Phytochemistry
61
621-630
2002
Oryza sativa (Q9FXT4), Oryza sativa
Manually annotated by BRENDA team
Li, S.; Kim, W.D.; Kaneko, S.; Prema, P.A.; Nakajima, M.; Kobayashi, H.
Expression of rice (Oryza sativa L. var. Nipponbare) alpha-galactosidase genes in Escherichia coli and characterization
Biosci. Biotechnol. Biochem.
71
520-526
2007
Oryza sativa (Q7XIV4), Oryza sativa (Q9FXT4), Oryza sativa
Manually annotated by BRENDA team
Lee, R.H.; Hsu, J.H.; Huang, H.J.; Lo, S.F.; Chen, S.C.
Alkaline alpha-galactosidase degrades thylakoid membranes in the chloroplast during leaf senescence in rice
New Phytol.
184
596-606
2009
Oryza sativa
Manually annotated by BRENDA team