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Sequence of URT1_ARATH

EC Number:2.7.7.52

EC Number
Recommended Name
Accession Code
Organism
No of amino acids
Molecular Weight [Da]
Source
RNA uridylyltransferase
O64642
Arabidopsis thaliana
764
85764
Reaction
UTP + RNAn = diphosphate + RNAn+3'-U
Other sequences found for EC No. 2.7.7.52

General information:

Sequence
show sequence in fasta format
  0 MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP
 60 PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP PSPFTTNQFD GNQRVSPEDA
120 YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS
180 NQHEQLMRHP QSTLSNSNMD PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP
240 PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
300 ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG
360 NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR EKESRVDNRG QRLLGQKARM
420 VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS
480 CANSFGFPKS DIDVCLAIEG DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP
540 VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
600 YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV
660 WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND RHLICIEDPF ETSHDLGRVV
720 DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
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Sequence related references
Sequence Reference
Authors
Title
Journal
Volume
Pages
Year
PubMed ID
373778
Lin X.,Kaul S.,Rounsley S.D.,Shea T.P.,Benito M.-I.,Town C.D.,Fujii C.Y.,Mason T.M.,Bowman C.L.,Barnstead M.E.,Feldblyum T.V.,Buell C.R.,Ketchum K.A.,Lee J.J.,Ronning C.M.,Koo H.L.,Moffat K.S.,Cronin L.A.,Shen M.,Pai G.,Van Aken S.,Umayam L.,Tallon L.J.,Gill J.E.,Adams M.D.,Carrera A.J.,Creasy T.H.,Goodman H.M.,Somerville C.R.,Copenhaver G.P.,Preuss D.,Nierman W.C.,White O.,Eisen J.A.,Salzberg S.L.,Fraser C.M.,Venter J.C.
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Nature
402
761-768
1999
373779
Cheng C.Y.,Krishnakumar V.,Chan A.P.,Thibaud-Nissen F.,Schobel S.,Town C.D.
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.
Plant J.
89
789-804
2017
373780
Yamada K.,Lim J.,Dale J.M.,Chen H.,Shinn P.,Palm C.J.,Southwick A.M.,Wu H.C.,Kim C.J.,Nguyen M.,Pham P.K.,Cheuk R.F.,Karlin-Newmann G.,Liu S.X.,Lam B.,Sakano H.,Wu T.,Yu G.,Miranda M.,Quach H.L.,Tripp M.,Chang C.H.,Lee J.M.,Toriumi M.J.,Chan M.M.,Tang C.C.,Onodera C.S.,Deng J.M.,Akiyama K.,Ansari Y.,Arakawa T.,Banh J.,Banno F.,Bowser L.,Brooks S.Y.,Carninci P.,Chao Q.,Choy N.,Enju A.,Goldsmith A.D.,Gurjal M.,Hansen N.F.,Hayashizaki Y.,Johnson-Hopson C.,Hsuan V.W.,Iida K.,Karnes M.,Khan S.,Koesema E.,Ishida J.,Jiang P.X.,Jones T.,Kawai J.,Kamiya A.,Meyers C.,Nakajima M.,Narusaka M.,Seki M.,Sakurai T.,Satou M.,Tamse R.,Vaysberg M.,Wallender E.K.,Wong C.,Yamamura Y.,Yuan S.,Shinozaki K.,Davis R.W.,Theologis A.,Ecker J.R.
Empirical analysis of transcriptional activity in the Arabidopsis genome.
Science
302
842-846
2003
373781
Sement F.M.,Ferrier E.,Zuber H.,Merret R.,Alioua M.,Deragon J.M.,Bousquet-Antonelli C.,Lange H.,Gagliardi D.
Uridylation prevents 3' trimming of oligoadenylated mRNAs.
Nucleic Acids Res.
41
7115-7127
2013
373782
Wang X.,Zhang S.,Dou Y.,Zhang C.,Chen X.,Yu B.,Ren G.
Synergistic and independent actions of multiple terminal nucleotidyl transferases in the 3' tailing of small RNAs in Arabidopsis.
PLoS Genet.
11
0-0
2015
373783
Tu B.,Liu L.,Xu C.,Zhai J.,Li S.,Lopez M.A.,Zhao Y.,Yu Y.,Ramachandran V.,Ren G.,Yu B.,Li S.,Meyers B.C.,Mo B.,Chen X.
Distinct and cooperative activities of HESO1 and URT1 nucleotidyl transferases in microRNA turnover in Arabidopsis.
PLoS Genet.
11
0-0
2015
373784
Zuber H.,Scheer H.,Ferrier E.,Sement F.M.,Mercier P.,Stupfler B.,Gagliardi D.
Uridylation and PABP cooperate to repair mRNA deadenylated ends in Arabidopsis.
Cell Rep.
14
2707-2717
2016
373785
Zuber H.,Scheer H.,Joly A.C.,Gagliardi D.
Respective contributions of URT1 and HESO1 to the uridylation of 5' fragments produced from RISC-cleaved mRNAs.
Front. Plant Sci.
9
1438-1438
2018
373786
Li T.,Natran A.,Chen Y.,Vercruysse J.,Wang K.,Gonzalez N.,Dubois M.,Inze D.
A genetics screen highlights emerging roles for CPL3, RST1 and URT1 in RNA metabolism and silencing.
Nat. Plants
5
539-550
2019
373787
Scheer H.,de Almeida C.,Ferrier E.,Simonnot Q.,Poirier L.,Pflieger D.,Sement F.M.,Koechler S.,Piermaria C.,Krawczyk P.,Mroczek S.,Chicher J.,Kuhn L.,Dziembowski A.,Hammann P.,Zuber H.,Gagliardi D.
The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis.
Nat. Commun.
12
1298-1298
2021
373788
Zhu L.,Hu Q.,Cheng L.,Jiang Y.,Lv M.,Liu Y.,Li F.,Shi Y.,Gong Q.
Crystal structure of Arabidopsis terminal uridylyl transferase URT1.
Biochem. Biophys. Res. Commun.
524
490-496
2020