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Sequence of RNR1_ARATH

EC Number:3.1.13.1

EC Number
Recommended Name
Accession Code
Organism
No of amino acids
Molecular Weight [Da]
Source
exoribonuclease II
Q6NQJ6
Arabidopsis thaliana
803
90679
Reaction
Exonucleolytic cleavage in the 3'- to 5'- direction to yield nucleoside 5'-phosphates
Other sequences found for EC No. 3.1.13.1

General information:

Sequence
  0 MMSVRAINGC SIIRTATSAG GPPVSLFRHR IQRLRASHLR EFSKLRLNFP LIRADRRFLG
 60 NSDAPSCSTC IHSLVESVSE ELESISRRKG SRMRVRASVK VKLTSYGEVL EDKLVNQELE
120 AGLLLEFKKD ADRVLLAVLH RRDGKKNWMV FDQNGVSCSI KPQQITYIVP NVYNFDHTGL
180 TDFLQRAQDN LDPQLLEFAW MELLEKNKPV TPEELAEMIY GRADPLESYC AHFLLSQDEI
240 YFSILESKGS RSIYSPRPTE QVEELLRRQR VKEAEDKEFQ EFIQLLKSAK KAPSHAKPPK
300 SSWLADDKVQ DRIGSLEAYA IDAWASTDQQ KLAGTILKSM GLQKTSVSAL NLLIDIGYFP
360 VHVNLELLKL NLPTHHSEAI TEAAEALLSE SSDIDAVRRI DLTHLKVYAI DVDEADELDD
420 ALSATRLQDG RIKIWIHVAD PARYVTPGSK VDREARRRGT SVFLPTATYP MFPEKLAMEG
480 MSLRQGENCN AVSVSVVLRS DGCITEYSVD NSIIRPTYML TYESASELLH LNLEEEAELK
540 LLSEAAFIRS QWRREQGAVD TTTLETRIKV VNPEDPEPLI NLYVENQADL AMRLVFEMMI
600 LCGEVVATFG SQHNIPLPYR GQPQSNIDVS AFAHLPEGPV RSSSIVKVMR AAEMNFRCPV
660 RHGVLGIPGY VQFTSPIRRY MDLTAHYQIK AFLRGGDNFP FSAGELEGIA ASVNMQSKVV
720 RKLSNTGLRY WVIEFLRRQE KGKKYTALVL RFVKDRIASL LLVEVGFQAT AWVSEGKQVG
780 DEIEVRVEEA HPRDDLILFK EVI
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Sequence related references
Sequence Reference
Authors
Title
Journal
Volume
Pages
Year
PubMed ID
91105
Perrin R.,Meyer E.H.,Zaepfel M.,Kim Y.-J.,Mache R.,Grienenberger J.-M.,Gualberto J.M.,Gagliardi D.
Two exoribonucleases act sequentially to process mature 3'-ends of atp9 mRNAs in Arabidopsis mitochondria.
J. Biol. Chem.
279
25440-25446
2004
91106
Tabata S.,Kaneko T.,Nakamura Y.,Kotani H.,Kato T.,Asamizu E.,Miyajima N.,Sasamoto S.,Kimura T.,Hosouchi T.,Kawashima K.,Kohara M.,Matsumoto M.,Matsuno A.,Muraki A.,Nakayama S.,Nakazaki N.,Naruo K.,Okumura S.,Shinpo S.,Takeuchi C.,Wada T.,Watanabe A.,Yamada M.,Yasuda M.,Sato S.,de la Bastide M.,Huang E.,Spiegel L.,Gnoj L.,O'Shaughnessy A.,Preston R.,Habermann K.,Murray J.,Johnson D.,Rohlfing T.,Nelson J.,Stoneking T.,Pepin K.,Spieth J.,Sekhon M.,Armstrong J.,Becker M.,Belter E.,Cordum H.,Cordes M.,Courtney L.,Courtney W.,Dante M.,Du H.,Edwards J.,Fryman J.,Haakensen B.,Lamar E.,Latreille P.,Leonard S.,Meyer R.,Mulvaney E.,Ozersky P.,Riley A.,Strowmatt C.,Wagner-McPherson C.,Wollam A.,Yoakum M.,Bell M.,Dedhia N.,Parnell L.,Shah R.,Rodriguez M.,Hoon See L.,Vil D.,Baker J.,Kirchoff K.,Toth K.,King L.,Bahret A.,Miller B.,Marra M.A.,Martienssen R.,McCombie W.R.,Wilson R.K.,Murphy G.,Bancroft I.,Volckaert G.,Wambutt R.,Duesterhoeft A.,Stiekema W.,Pohl T.,Entian K.-D.,Terryn N.,Hartley N.,Bent E.,Johnson S.,Langham S.-A.,McCullagh B.,Robben J.,Grymonprez B.,Zimmermann W.,Ramsperger U.,Wedler H.,Balke K.,Wedler E.,Peters S.,van Staveren M.,Dirkse W.,Mooijman P.,Klein Lankhorst R.,Weitzenegger T.,Bothe G.,Rose M.,Hauf J.,Berneiser S.,Hempel S.,Feldpausch M.,Lamberth S.,Villarroel R.,Gielen J.,Ardiles W.,Bents O.,Lemcke K.,Kolesov G.,Mayer K.F.X.,Rudd S.,Schoof H.,Schueller C.,Zaccaria P.,Mewes H.-W.,Bevan M.,Fransz P.F.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Nature
408
823-826
2000
91107
Cheng C.Y.,Krishnakumar V.,Chan A.P.,Thibaud-Nissen F.,Schobel S.,Town C.D.
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.
Plant J.
89
789-804
2017
91108
Yamada K.,Lim J.,Dale J.M.,Chen H.,Shinn P.,Palm C.J.,Southwick A.M.,Wu H.C.,Kim C.J.,Nguyen M.,Pham P.K.,Cheuk R.F.,Karlin-Newmann G.,Liu S.X.,Lam B.,Sakano H.,Wu T.,Yu G.,Miranda M.,Quach H.L.,Tripp M.,Chang C.H.,Lee J.M.,Toriumi M.J.,Chan M.M.,Tang C.C.,Onodera C.S.,Deng J.M.,Akiyama K.,Ansari Y.,Arakawa T.,Banh J.,Banno F.,Bowser L.,Brooks S.Y.,Carninci P.,Chao Q.,Choy N.,Enju A.,Goldsmith A.D.,Gurjal M.,Hansen N.F.,Hayashizaki Y.,Johnson-Hopson C.,Hsuan V.W.,Iida K.,Karnes M.,Khan S.,Koesema E.,Ishida J.,Jiang P.X.,Jones T.,Kawai J.,Kamiya A.,Meyers C.,Nakajima M.,Narusaka M.,Seki M.,Sakurai T.,Satou M.,Tamse R.,Vaysberg M.,Wallender E.K.,Wong C.,Yamamura Y.,Yuan S.,Shinozaki K.,Davis R.W.,Theologis A.,Ecker J.R.
Empirical analysis of transcriptional activity in the Arabidopsis genome.
Science
302
842-846
2003
91110
Bollenbach T.J.,Lange H.,Gutierrez R.,Erhardt M.,Stern D.B.,Gagliardi D.
RNR1, a 3'-5' exoribonuclease belonging to the RNR superfamily, catalyzes 3' maturation of chloroplast ribosomal RNAs in Arabidopsis thaliana.
Nucleic Acids Res.
33
2751-2763
2005