6.5.1.3 additional information the enzyme seals nicked 3'-OH/5'-PO4 duplexes in which the 3'-OH strand is RNA. The enzyme entails reaction with ATP to form a covalent enzyme-AMP intermediate, transfer of AMP to the nick 5'-PO4, and attack of the RNA 3'-OH on the adenylylated nick to form a 3'-5' phosphodiester Naegleria gruberi ? - ? 89 6.5.1.3 ATP + (2E,6E)-farnesyl diphosphate assay contains pyruvate kinase, phosphoenolpyruvate and pyrophosphatase to recover ATP Tequatrovirus T4 (2E,6E)-farnesyl-triphospho(5')adenosine + diphosphate - ir 411651 6.5.1.3 ATP + (2E,6E)-farnesyl triphosphate assay contains pyruvate kinase, phosphoenolpyruvate and pyrophosphatase to recover ATP Tequatrovirus T4 (2E,6E)-farnesyl-tetraphospho(5')adenosine + diphosphate - ir 411652 6.5.1.3 ATP + 5'-aaaCCAGUC RNA-DNA hybrid as substrate, chemical step is represented as irreversible, because reverse reaction, pyrophosphorolysis with formation of a triphosphate is 10000000-times slower than the forward reaction synthetic construct AMP + diphosphate + ? - ir 369204 6.5.1.3 ATP + dimethylallyl diphosphate assay contains pyruvate kinase, phosphoenolpyruvate and pyrophosphatase to recover ATP Tequatrovirus T4 dimethylallyl-triphospho(5')adenosine + diphosphate - ir 411667 6.5.1.3 ATP + geranyl diphosphate assay contains pyruvate kinase, phosphoenolpyruvate and pyrophosphatase to recover ATP Tequatrovirus T4 geranyl-triphospho(5')adenosine + diphosphate - ir 411671 6.5.1.3 ATP + geranyl triphosphate assay contains pyruvate kinase, phosphoenolpyruvate and pyrophosphatase to recover ATP Tequatrovirus T4 geranyl-tetraphospho(5')adenosine + diphosphate - ir 411673 6.5.1.3 ATP + isopentenyl diphosphate assay contains pyruvate kinase, phosphoenolpyruvate and pyrophosphatase to recover ATP Tequatrovirus T4 adenosine 5'-isopentenyl triphosphate + diphosphate - ir 411675 6.5.1.3 ATP + isopentenyl triphosphate assay contains pyruvate kinase, phosphoenolpyruvate and pyrophosphatase to recover ATP Tequatrovirus T4 isopentenyl-tetraphospho(5')adenosine + diphosphate - ir 411678 6.5.1.3 ATP + (ribonucleotide)n + (ribonucleotide)m - Tequatrovirus T4 AMP + diphosphate + (ribonucleotide)n+m - r 813