6.5.1.2 Ca2+ 60% as active as Mg2+ in activation as reported in one study, no activity in another 1909, 1910 6.5.1.2 K+ stimulates at low concentrations 1909 6.5.1.2 Mg2+ optimal concentration: 1-3 mM 1909, 1910 6.5.1.2 NH4+ stimulates at low concentrations 1909 6.5.1.2 Zn2+ slight activation 1909, 1910 6.5.1.2 K+ - 1910 6.5.1.2 K+ stimulates 1910 6.5.1.2 Mg2+ requires divalent cations, Mn2+ or Mg2+ 1909, 1910, 1971 6.5.1.2 Mn2+ activation at 0.2-1.0 mM, inhibition at higher concentration 1910 6.5.1.2 Mn2+ requires divalent cations, Mn2+ or Mg2+ 1909, 1910, 1971 6.5.1.2 NH4+ - 1910 6.5.1.2 NH4+ stimulates 1910 6.5.1.2 Rb+ stimulates 1910 6.5.1.2 KCl stimulation by 300 mM KCl, in 10% w/v polyethylene glycol 6000 solution or 150-300 mM KCl in 15% polyethylene glycol 6000 solution. Stimulation of intermolecular blunt end ligation by 150-250 mM KCl in 15% polyethylene glycol 600 solution 1970 6.5.1.2 NaCl stimulation of intermolecular cohesive-end ligation by 200 mM NaCl, in 10% w/v polyethylene glycol 6000 solution, or 100-200 mM NaCl in 15% polyethylene glycol 6000 solution. Stimulation of intermolecular blunt end ligation by 100-150 mM NaCl in 15% polyethylene glycol 600 solution 1970 6.5.1.2 K+ activates at 1-150 mM 1971 6.5.1.2 Mg2+ optimal concentration: 5-9 mM 1971 6.5.1.2 Mn2+ optimal concentration: 3-6 mM 1971 6.5.1.2 NH4+ activates at 1-150 mM 1971 6.5.1.2 Zn2+ zinc binding motif, Cys437, Cys440, Cys455, Cys460 649444 6.5.1.2 additional information no zinc-binding motif as known for bacterial DNA-ligase 650937 6.5.1.2 Zn2+ 1 mol per mol of enzyme, Cys406, Cys409, Cys422 and Cys427 form a zinc binding motif 650967 6.5.1.2 K+ 25 mM, stimulates activity 651073 6.5.1.2 NH4+ 10 mM, stimulates activity 651073 6.5.1.2 Zn2+ 0.24 mol per mol protein 651073 6.5.1.2 Ca2+ 40% of activity obtained with Mg2+ 651212 6.5.1.2 Cu2+ 30% of activity obtained with Mg2+ 651212 6.5.1.2 K+ highest activity below 10 mM 651212 6.5.1.2 Mg2+ required 650967, 651073, 651212 6.5.1.2 Mn2+ 50% of activity obtained with Mg2+ 651212 6.5.1.2 Na+ inhibitory 651212 6.5.1.2 NH4+ highest activity below 10 mM 651212 6.5.1.2 Ni2+ 10% of activity obtained with Mg2+ 651212 6.5.1.2 Zn2+ 5% of activity obtained with Mg2+ 651212 6.5.1.2 Co2+ can partially substitute for Mg2+ 652175 6.5.1.2 Mg2+ highest activity at 5 mM 652175 6.5.1.2 Mn2+ can partially substitute for Mg2+ 652175 6.5.1.2 additional information Ca2+, Zn2+ and Cu2+ have no effect on activity 652175 6.5.1.2 additional information no zinc binding motif as known from most bacterial DNA-ligases 652175 6.5.1.2 Zn2+ bound to the C-terminal fragment 652786 6.5.1.2 Zn2+ zinc binding motiv, C408, C411, C432 and C426 653376 6.5.1.2 Ca2+ supports formation of DNA-adenylate intermediate 653379 6.5.1.2 Mg2+ 5 mM 653379 6.5.1.2 Mn2+ 5 mM, most effective metal cofactor 653379 6.5.1.2 Ni2+ supports formation of DNA-adenylate intermediate 653379 6.5.1.2 Co2+ 25% of the activity with Mg2+ 653388 6.5.1.2 Mg2+ 1-10 mM, required 653388 6.5.1.2 Mn2+ 1-10 mM, required 653388 6.5.1.2 Zn2+ no effect 653388 6.5.1.2 Mg2+ or Mn2+ required, maximal activity at 10-15 mM 661248 6.5.1.2 Mn2+ or Mg2+ required, maximal activity at 1 mM 661248 6.5.1.2 Ca2+ activates wild-type enzyme and mutant enzyme DELTA582-667 661789 6.5.1.2 Mg2+ best metal-activator of wild-type enzyme and mutant enzyme DELTA582-667 661789 6.5.1.2 Mn2+ activates wild-type enzyme and mutant enzyme DELTA582-667 661789 6.5.1.2 KCl no activity is detected in the absence of KCl. Maximum activity at 3.2 M KCl, close to the intracellular KCl concentration of Haloferax volcanii cells 672808 6.5.1.2 Ca2+ 10fold lower activation than Mn2+, maximal activity at 2 mM 672811 6.5.1.2 Mg2+ 10fold lower activation than Mn2+, maximal activity at 1 mM 672811 6.5.1.2 Mn2+ preference for Mn2+ as cofactor, maximal activity at 1 mM 672811 6.5.1.2 Ca2+ in presence of Ca2+ MtuLigA is able to carry out the first two steps of ligation reaction that is the transfer of AMP to enzyme from NAD+ and further transfer of it to substrate to form DNA-adenylate intermediate. Ca2+ can not support nick closure activity 677062 6.5.1.2 Mg2+ divalent cation required, optimal concentration: 10 mM 677062 6.5.1.2 Mg2+ Mg2+ activates at 4.0 mM 690424 6.5.1.2 Mg2+ optimum concentration at 5 mM 694991 6.5.1.2 Ca2+ the enzyme requires a divalent cation like Ca2+, optimal activity at about 20 mM Ca2+ 714854 6.5.1.2 Mg2+ the enzyme requires a divalent cation like Mg2+, optimal activity at about 20 mM Mg2+ 714854 6.5.1.2 Mn2+ the enzyme requires a divalent cation like Mn2+, maximal activity at 3 mM Mn2+ 714854 6.5.1.2 Mg2+ required for activity, maximal activity occurs with 10-20 mM MgCl2 in the presence of 30 mM each of KCl and (NH4)2SO4 715672 6.5.1.2 Co2+ no activity observed in the presence of 728580 6.5.1.2 KCl enzymatic activity increased in the presence of monovalent cations, maximal activity at 25 mM NaCl 728580 6.5.1.2 MgCl2 highest activity: 10 mM MgCl2 728580 6.5.1.2 NaCl enzymatic activity increased in the presence of monovalent cations, maximal activity at 5 mM NaCl 728580 6.5.1.2 NH4Cl enzymatic activity increased in the presence of monovalent cations, maximal activity at 10 mM NaCl 728580 6.5.1.2 Ni2+ no activity observed in the presence of 728580 6.5.1.2 NH4+ stimulates enzyme activity at 10 mM 748783