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Information on Organism Trichormus variabilis

Synonyms:
Anabaena variabilis Kutzing ex Bornet & Flahault, 1886; Anabaena variabilis; Trichormus variabilis (Kutzing ex Bornet et Flahault 1886) Komarek et Anagnostidis 1987; Trichormus variabilis; Anabaena variabilis Kutzing ex Bornet & Flahault 1886; Trichormus variabilis (Kutzing ex Bornet et Flahault) Komarek et Anagnostidis 1987;
Word Map for Organism Trichormus variabilis
TaxTree of Organism Trichormus variabilis
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Cyanobacteria/Melainabacteria group can be found in Brenda (clade)
Cyanobacteria can be found in Brenda BRENDA pathways(phylum)
Nostocales can be found in Brenda BRENDA pathways(order)
Nostocaceae can be found in Brenda BRENDA pathways(family)
Trichormus can be found in Brenda BRENDA pathways(genus)
Trichormus variabilis can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
2-amino-3-hydroxycyclopent-2-enone biosynthesis
-
-
PWY-7536
3-dehydroquinate biosynthesis I
-
-
PWY-6164
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methylarginine biosynthesis
-
-
PWY-6511
4-aminobutanoate degradation V
-
-
PWY-5022
Acarbose and validamycin biosynthesis
-
-
acetate fermentation
-
-
acetoin degradation
-
-
acrylonitrile degradation I
-
-
PWY-7308
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alanine metabolism
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-
Alanine, aspartate and glutamate metabolism
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-
Amino sugar and nucleotide sugar metabolism
-
-
Aminobenzoate degradation
-
-
aminopropylcadaverine biosynthesis
-
-
PWY0-1303
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
arachidonate biosynthesis
-
-
Arginine and proline metabolism
-
-
Arginine biosynthesis
-
-
arginine metabolism
-
-
arsenite to oxygen electron transfer
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-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
Ascorbate and aldarate metabolism
-
-
ascorbate metabolism
-
-
avenanthramide biosynthesis
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-
PWY-8157
bacterial bioluminescence
-
-
PWY-7723
baumannoferrin biosynthesis
-
-
PWY-7988
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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-
PWY-6444
beta-Alanine metabolism
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-
Bifidobacterium shunt
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-
P124-PWY
Biosynthesis of 12-, 14- and 16-membered macrolides
-
-
Biosynthesis of secondary metabolites
-
-
bisucaberin biosynthesis
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-
PWY-6381
bryostatin biosynthesis
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-
PWY-8047
Butanoate metabolism
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-
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C4 and CAM-carbon fixation
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-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
C5-Branched dibasic acid metabolism
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-
cadaverine biosynthesis
-
-
PWY0-1601
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
Carbon fixation in photosynthetic organisms
-
-
Carbon fixation pathways in prokaryotes
-
-
Carotenoid biosynthesis
-
-
carotenoid biosynthesis
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-
cellulose degradation
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-
cellulose degradation II (fungi)
-
-
PWY-6788
Chloroalkane and chloroalkene degradation
-
-
chlorogenic acid degradation
-
-
PWY-6781
chorismate biosynthesis from 3-dehydroquinate
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-
PWY-6163
chorismate metabolism
-
-
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
Citrate cycle (TCA cycle)
-
-
citric acid cycle
-
-
CO2 fixation into oxaloacetate (anaplerotic)
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-
PWYQT-4429
costunolide biosynthesis
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-
PWY-6540
cremeomycin biosynthesis
-
-
PWY-8296
cyanate degradation
cyanophycin metabolism
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PWY-7052
cyclic electron flow
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PWY-8270
Cysteine and methionine metabolism
-
-
cysteine metabolism
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-
cytosolic NADPH production (yeast)
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-
PWY-7268
D-Amino acid metabolism
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-
D-lactate to cytochrome bo oxidase electron transfer
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-
PWY0-1565
D-xylose degradation IV
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-
PWY-7294
degradation of aromatic, nitrogen containing compounds
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-
degradation of pentoses
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-
delta-guaiene biosynthesis
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-
PWY-6669
desferrioxamine B biosynthesis
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-
PWY-6376
desferrioxamine E biosynthesis
-
-
PWY-6375
diethylphosphate degradation
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-
PWY-5491
dipicolinate biosynthesis
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-
PWY-8088
ectoine biosynthesis
-
-
P101-PWY
ectoine degradation
-
-
PWY-7855
Entner-Doudoroff pathway I
-
-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
NPGLUCAT-PWY
ephedrine biosynthesis
-
-
PWY-5883
erythromycin D biosynthesis
-
-
PWY-7106
ethanol degradation IV
-
-
PWY66-162
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis IV (engineered)
-
-
PWY-7126
ethene biosynthesis V (engineered)
-
-
PWY-7124
Fatty acid biosynthesis
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-
fatty acid biosynthesis initiation (mitochondria)
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PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
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PWY-6799
fatty acid biosynthesis initiation (type II)
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-
PWY-4381
Fe(II) oxidation
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-
PWY-6692
flavin biosynthesis
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-
flavin biosynthesis I (bacteria and plants)
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-
RIBOSYN2-PWY
flavin biosynthesis II (archaea)
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PWY-6167
flavin biosynthesis III (fungi)
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-
PWY-6168
Folate biosynthesis
-
-
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
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-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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-
P185-PWY
formaldehyde oxidation I
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-
RUMP-PWY
formate oxidation to CO2
-
-
PWY-1881
formate to nitrite electron transfer
-
-
PWY0-1585
Fructose and mannose metabolism
-
-
gadusol biosynthesis
-
-
PWY-7752
galactolipid biosynthesis II
-
-
PWY-7666
gallate biosynthesis
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PWY-6707
germacrene biosynthesis
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PWY-5733
gluconeogenesis
-
-
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
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PWY66-399
glutamate and glutamine metabolism
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-
Glutathione metabolism
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-
glycerol degradation to butanol
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-
PWY-7003
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
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PWY0-1561
Glycerolipid metabolism
-
-
glycine biosynthesis II
-
-
GLYCINE-SYN2-PWY
glycine cleavage
-
-
GLYCLEAV-PWY
glycine metabolism
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-
Glycine, serine and threonine metabolism
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-
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
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PWY-7900
glycolate and glyoxylate degradation
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-
glycolysis
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-
Glycolysis / Gluconeogenesis
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-
glycolysis I (from glucose 6-phosphate)
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-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
Glyoxylate and dicarboxylate metabolism
-
-
glyoxylate assimilation
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-
PWY-5744
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
grixazone biosynthesis
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-
PWY-7153
heme metabolism
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-
heterolactic fermentation
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-
P122-PWY
Histidine metabolism
-
-
histidine metabolism
-
-
homocysteine and cysteine interconversion
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-
PWY-801
hydrogen oxidation I (aerobic)
-
-
P283-PWY
hydrogen production
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-
hydrogen production III
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-
PWY-6759
hydrogen production VI
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PWY-6780
hydrogen production VIII
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-
PWY-6785
hydrogen sulfide biosynthesis II (mammalian)
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-
PWY66-426
IAA biosynthesis
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-
incomplete reductive TCA cycle
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-
P42-PWY
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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-
PWY-5025
isoleucine metabolism
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-
isopropanol biosynthesis (engineered)
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-
PWY-6876
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-arabinose degradation IV
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-
PWY-7295
L-arginine degradation X (arginine monooxygenase pathway)
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-
ARGDEG-V-PWY
L-ascorbate degradation II (bacterial, aerobic)
-
-
PWY-6961
L-ascorbate degradation III
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PWY-6960
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-cysteine biosynthesis III (from L-homocysteine)
-
-
HOMOCYSDEGR-PWY
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation VII (to butanoate)
-
-
GLUDEG-II-PWY
L-glutamate degradation XI (reductive Stickland reaction)
-
-
PWY-8190
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-histidine degradation I
-
-
HISDEG-PWY
L-histidine degradation II
-
-
PWY-5028
L-histidine degradation III
-
-
PWY-5030
L-histidine degradation VI
-
-
HISHP-PWY
L-homoserine biosynthesis
-
-
HOMOSERSYN-PWY
L-isoleucine biosynthesis I (from threonine)
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-
ILEUSYN-PWY
L-isoleucine biosynthesis II
-
-
PWY-5101
L-isoleucine biosynthesis III
-
-
PWY-5103
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-lysine biosynthesis I
-
-
DAPLYSINESYN-PWY
L-lysine biosynthesis II
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PWY-2941
L-lysine biosynthesis III
-
-
PWY-2942
L-lysine biosynthesis VI
-
-
PWY-5097
L-lysine degradation I
-
-
PWY0-461
L-lysine degradation V
-
-
PWY-5283
L-lysine degradation X
-
-
PWY-6328
L-methionine biosynthesis IV
-
-
PWY-7977
L-phenylalanine degradation I (aerobic)
-
-
PHENYLALANINE-DEG1-PWY
L-phenylalanine degradation V
-
-
PWY-7158
L-serine biosynthesis II
-
-
PWY-8011
L-threonine degradation V
-
-
PWY66-428
L-tyrosine biosynthesis IV
-
-
PWY-6134
L-valine biosynthesis
-
-
VALSYN-PWY
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
linoleate biosynthesis III (cyanobacteria)
-
-
PWY-7593
lipid metabolism
-
-
lupanine biosynthesis
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-
PWY-5468
Lysine biosynthesis
-
-
Lysine degradation
-
-
lysine metabolism
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-
macrolide antibiotic biosynthesis
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-
malate/L-aspartate shuttle pathway
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-
MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
-
-
metabolism of disaccharids
-
-
Methane metabolism
-
-
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methylaspartate cycle
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
molybdenum cofactor biosynthesis
-
-
PWY-8171
Monobactam biosynthesis
-
-
mupirocin biosynthesis
-
-
PWY-8012
mycobactin biosynthesis
-
-
PWY185E-1
N-acetylneuraminate and N-acetylmannosamine degradation II
-
-
PWY-7581
NAD metabolism
-
-
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
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-
PWY0-1567
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
Nicotinate and nicotinamide metabolism
-
-
nitrate assimilation
-
-
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction VI (assimilatory)
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-
PWY490-3
nitrate reduction X (dissimilatory, periplasmic)
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PWY0-1584
nitrogen fixation I (ferredoxin)
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N2FIX-PWY
Nitrogen metabolism
-
-
nitrogen remobilization from senescing leaves
-
-
PWY-6549
Nitrotoluene degradation
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-
nocardicin A biosynthesis
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PWY-7797
non-pathway related
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-
norspermidine biosynthesis
-
-
PWY-6562
nucleoside and nucleotide degradation (archaea)
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-
PWY-5532
oleandomycin activation/inactivation
-
-
PWY-6972
oleate biosynthesis III (cyanobacteria)
-
-
PWY-7587
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
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-
PWY-7985
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pederin biosynthesis
-
-
PWY-8049
Penicillin and cephalosporin biosynthesis
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway
-
-
pentose phosphate pathway (non-oxidative branch) I
-
-
NONOXIPENT-PWY
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis II (staphylococci)
-
-
PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
PWY0-1586
Phenylalanine metabolism
-
-
phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
Phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis
-
-
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
Photosynthesis
-
-
photosynthesis
-
-
photosynthesis light reactions
-
-
PWY-101
platensimycin biosynthesis
-
-
PWY-8179
polyamine pathway
-
-
polyphosphate metabolism
-
-
PWY-8138
Porphyrin and chlorophyll metabolism
-
-
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
Propanoate metabolism
-
-
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
PWY1YI0-7
Purine metabolism
-
-
purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
pyoverdine I biosynthesis
-
-
PWY-6409
Pyrimidine metabolism
-
-
pyrimidine metabolism
-
-
pyruvate decarboxylation to acetyl CoA III
-
-
PWY-8275
pyruvate fermentation to (R)-acetoin I
-
-
PWY-5938
pyruvate fermentation to (R)-acetoin II
-
-
PWY-5939
pyruvate fermentation to (S)-acetoin
-
-
PWY-6389
pyruvate fermentation to acetate I
-
-
P142-PWY
pyruvate fermentation to acetate III
-
-
PWY-5483
pyruvate fermentation to acetate VI
-
-
PWY-5538
pyruvate fermentation to acetate VII
-
-
PWY-5600
pyruvate fermentation to acetone
-
-
PWY-6588
pyruvate fermentation to butanoate
-
-
CENTFERM-PWY
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to hexanol (engineered)
-
-
PWY-6863
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
Pyruvate metabolism
-
-
pyruvate to cytochrome bo oxidase electron transfer
-
-
PWY-7544
quinate degradation I
-
-
QUINATEDEG-PWY
quinate degradation II
-
-
PWY-6416
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway
-
-
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive monocarboxylic acid cycle
-
-
PWY-5493
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
rhizobactin 1021 biosynthesis
-
-
PWY-761
Riboflavin metabolism
-
-
rosmarinic acid biosynthesis I
-
-
PWY-5048
Rubisco shunt
-
-
PWY-5723
serine metabolism
-
-
sesquiterpene lactone biosynthesis
-
-
Sesquiterpenoid and triterpenoid biosynthesis
-
-
shinorine biosynthesis
-
-
PWY-7751
spermidine biosynthesis II
-
-
PWY-6559
Starch and sucrose metabolism
-
-
Styrene degradation
-
-
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bo oxidase electron transfer
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-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sulfopterin metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
GLYCOLYSIS-E-D
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
Taurine and hypotaurine metabolism
-
-
taurine biosynthesis III
-
-
PWY-8359
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VIII (Chlamydia)
-
-
TCA-1
tetrapyrrole biosynthesis I (from glutamate)
-
-
PWY-5188
tetrapyrrole biosynthesis II (from glycine)
-
-
PWY-5189
Thiamine metabolism
-
-
threonine metabolism
-
-
trehalose biosynthesis IV
-
-
PWY-2622
triacylglycerol degradation
-
-
LIPAS-PWY
Tropane, piperidine and pyridine alkaloid biosynthesis
-
-
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
type I lipoteichoic acid biosynthesis (S. aureus)
-
-
PWY-7817
Tyrosine metabolism
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
UMP biosynthesis I
-
-
PWY-5686
UMP biosynthesis II
-
-
PWY-7790
UMP biosynthesis III
-
-
PWY-7791
validamycin biosynthesis
-
-
PWY-5818
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
-
-
vitamin E biosynthesis (tocopherols)
-
-
PWY-1422
vitamin E biosynthesis (tocotrienols)
-
-
PWY-7436
vitamin E metabolism
-
-
vitamin K-epoxide cycle
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
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LINKS TO OTHER DATABASES (specific for Trichormus variabilis)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA