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Information on Organism Symbiobacterium thermophilum

Synonyms:
DSM 24528; IAM 14863; JCM 14929; strain T; Symbiobacteriaceae bacterium G2; Symbiobacterium sp. No. 67; Symbiobacterium sp. YK67; Symbiobacterium thermophilum Ohno et al. 2000; Symbiobacterium thermophilum;
Word Map for Organism Symbiobacterium thermophilum
TaxTree of Organism Symbiobacterium thermophilum
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Clostridia can be found in Brenda BRENDA pathways(class)
Eubacteriales can be found in Brenda BRENDA pathways(order)
Symbiobacteriaceae can be found in Brenda (family)
Symbiobacterium can be found in Brenda BRENDA pathways(genus)
Symbiobacterium thermophilum can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1,4)-beta-D-xylan degradation
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PWY-6717
3-hydroxypropanoate cycle
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PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
8-amino-7-oxononanoate biosynthesis I
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PWY-6519
8-amino-7-oxononanoate biosynthesis II
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PWY-7147
8-amino-7-oxononanoate biosynthesis III
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PWY-6578
8-amino-7-oxononanoate biosynthesis IV
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PWY-8203
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
alpha-tomatine degradation
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PWY18C3-5
Amino sugar and nucleotide sugar metabolism
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Aminoacyl-tRNA biosynthesis
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Arginine and proline metabolism
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arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
beta-Alanine metabolism
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Biosynthesis of secondary metabolites
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biotin biosynthesis
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Biotin metabolism
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
ceramide and sphingolipid recycling and degradation (yeast)
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PWY-7119
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
cyanate degradation
Cyanoamino acid metabolism
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D-Amino acid metabolism
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d-xylose degradation
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diethylphosphate degradation
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PWY-5491
ethanol degradation IV
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PWY66-162
Fe(II) oxidation
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PWY-6692
firefly bioluminescence
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PWY-7913
Folate biosynthesis
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formate oxidation to CO2
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PWY-1881
ginsenoside metabolism
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
Glutathione metabolism
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glycogen degradation II
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PWY-5941
glycogen metabolism
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Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glycosphingolipid biosynthesis - globo and isoglobo series
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Glyoxylate and dicarboxylate metabolism
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glyoxylate assimilation
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PWY-5744
gossypol biosynthesis
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PWY-5773
heme metabolism
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justicidin B biosynthesis
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PWY-6824
L-lysine biosynthesis III
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PWY-2942
linamarin degradation
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PWY-3121
linustatin bioactivation
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PWY-7091
lotaustralin degradation
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PWY-6002
Lysine biosynthesis
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Lysine degradation
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lysine metabolism
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matairesinol biosynthesis
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PWY-5466
Metabolic pathways
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Methane metabolism
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methanol oxidation to formaldehyde IV
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PWY-5506
Microbial metabolism in diverse environments
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NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
neolinustatin bioactivation
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PWY-7092
nitrate reduction II (assimilatory)
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PWY-381
Nitrogen metabolism
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non-pathway related
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ornithine metabolism
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Other glycan degradation
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oxalate degradation III
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PWY-6696
oxalate degradation VI
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PWY-7985
Oxidative phosphorylation
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oxidative phosphorylation
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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peptidoglycan recycling I
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PWY0-1261
peptidoglycan recycling II
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PWY-7883
Phenylpropanoid biosynthesis
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phosphopantothenate biosynthesis I
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PANTO-PWY
Porphyrin and chlorophyll metabolism
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purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
Pyrimidine metabolism
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pyrimidine metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
reductive acetyl coenzyme A pathway
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sesamin biosynthesis
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PWY-5469
Sphingolipid metabolism
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sphingosine metabolism
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Starch and sucrose metabolism
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starch degradation
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succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sulfopterin metabolism
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superoxide radicals degradation
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DETOX1-PWY
tetrapyrrole biosynthesis I (from glutamate)
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PWY-5188
Thiamine metabolism
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tRNA charging
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TRNA-CHARGING-PWY
Tryptophan metabolism
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tryptophan metabolism
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Tyrosine metabolism
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tyrosine metabolism
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UTP and CTP de novo biosynthesis
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PWY-7176
UTP and CTP dephosphorylation I
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PWY-7185
UTP and CTP dephosphorylation II
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PWY-7177
Various types of N-glycan biosynthesis
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
tryptophanase-positive Symbiobacterium thermophilum is a free-living syntrophic bacterium that grows effectively in a coculture with Geobacillus stearothermophilus strain S (JCM 30104)
Manually annotated by BRENDA team
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Symbiobacterium thermophilum)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA