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Information on Organism Streptomyces ruber

Synonyms:
ATCC 17754; BCRC 12358; CBS 228.65; CCRC 12358; CCRC:12358; Chainia rubra; Chainia rubra Thirumalachar 1955 (Approved Lists 1980); CMI 112789; CMI:112789; culture-collection:NRRL:B:5315; DSM 40304; IFO 14600; ISP 5304; JCM 3131; KCC A-0131; NBRC 14600; NCIB 10983; NCIB:10983; NCIMB 10983; NRRL B-5315; NRRL-ISP 5304; Streptomyces ruber; Streptomyces ruber (Thirumalachar 1955) Goodfellow et al. 1986;
Word Map for Organism Streptomyces ruber
TaxTree of Organism Streptomyces ruber
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cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Actinobacteria can be found in Brenda BRENDA pathways(phylum)
Actinomycetia can be found in Brenda BRENDA pathways(class)
Streptomycetales can be found in Brenda BRENDA pathways(order)
Streptomycetaceae can be found in Brenda BRENDA pathways(family)
Streptomyces can be found in Brenda BRENDA pathways(genus)
Streptomyces ruber can be found in Brenda BRENDA pathways(species)
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EC NUMBER
COMMENTARY hide
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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Amino sugar and nucleotide sugar metabolism
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anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Biosynthesis of secondary metabolites
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
Citrate cycle (TCA cycle)
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citric acid cycle
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Cysteine and methionine metabolism
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Fe(II) oxidation
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PWY-6692
formaldehyde assimilation I (serine pathway)
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PWY-1622
GDP-alpha-D-glucose biosynthesis
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PWY-5661
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis III
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PWY66-399
Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
incomplete reductive TCA cycle
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P42-PWY
L-alanine degradation IV
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PWY1-2
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
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Methane metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Oxidative phosphorylation
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oxidative phosphorylation
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pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
Starch and sucrose metabolism
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succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
Taurine and hypotaurine metabolism
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TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
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TCA-1
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
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optimization of culture conditions for production of carboxymethyl cellulase using Plackett-Burman design. Optimized conditions include high concentration of KH2PO4, low concentration of MgSO4, and rice straw at 30 g/l as low cost source of cellulose
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Streptomyces ruber)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA