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Organism related
Word Map for Organism Sphingomonas paucimobilis SYK-6
- Sphingomonas paucimobilis SYK-6
- dioxygenases
- 4,5-dioxygenase
- vanillate
- ligab
- syringate
- 3-o-methylgallate
- 5-carboxyvanillate
- o-demethylase
- gallate
- biphenyl
-
katayama
-
4,5-cleavage
- 4-oxalomesaconate
-
tetrahydrofolate-dependent
- tetrahydrofolate
- 2-pyrone-4,6-dicarboxylate
- oxaloacetate
-
beta-aryl
-
lignin-related
-
meta-cleavage
-
extradiol
-
o-demethylation
TaxTree of Organism Sphingomonas paucimobilis SYK-6
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PATHWAY 
BRENDA Link
KEGG Link
MetaCyc Link
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1,5-anhydrofructose degradation
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PWY-6992
2-hydroxybiphenyl degradation
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PWY-7008
2-nitrotoluene degradation
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PWY-5641
3,4-dichlorobenzoate degradation
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PWY-6217
3-chlorobenzoate degradation II (via protocatechuate)
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PWY-6216
3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate
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HCAMHPDEG-PWY
4-coumarate degradation (aerobic)
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PWY-8002
4-coumarate degradation (anaerobic)
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PWY-7046
4-hydroxy-2-nonenal detoxification
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PWY-7112
8-amino-7-oxononanoate biosynthesis III
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PWY-6578
acetaldehyde biosynthesis II
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PWY-6330
acetate and ATP formation from acetyl-CoA III
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PWY-8328
acetate conversion to acetyl-CoA
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PWY0-1313
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
adlupulone and adhumulone biosynthesis
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PWY-7857
Amaryllidacea alkaloids biosynthesis
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PWY-7826
biphenyl degradation
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PWY5F9-12
bupropion degradation
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PWY66-241
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
Calvin-Benson-Bassham cycle
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CALVIN-PWY
camalexin biosynthesis
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CAMALEXIN-SYN
carbazole degradation
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PWY-6550
catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
chitin deacetylation
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PWY-7118
cinnamate and 3-hydroxycinnamate degradation to 2-hydroxypentadienoate
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PWY-6690
cis-geranyl-CoA degradation
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PWY-6672
colupulone and cohumulone biosynthesis
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PWY-5133
diphenyl ethers degradation
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PWY-7747
ethanol degradation II
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PWY66-21
ethanol degradation III
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PWY66-161
ethanol degradation IV
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PWY66-162
firefly bioluminescence
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PWY-7913
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
gallate degradation I
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GALLATE-DEGRADATION-II-PWY
gallate degradation II
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GALLATE-DEGRADATION-I-PWY
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glycine biosynthesis II
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GLYCINE-SYN2-PWY
glycine cleavage
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GLYCLEAV-PWY
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
itaconate degradation
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PWY-5749
L-dopa and L-dopachrome biosynthesis
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PWY-6481
L-isoleucine biosynthesis V
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PWY-5108
L-methionine degradation III
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PWY-5082
long chain fatty acid ester synthesis (engineered)
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PWY-6873
lupulone and humulone biosynthesis
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PWY-5132
melatonin degradation I
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PWY-6398
methylgallate degradation
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METHYLGALLATE-DEGRADATION-PWY
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
pentachlorophenol degradation
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PCPDEG-PWY
pentose phosphate pathway (non-oxidative branch) II
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PWY-8178
pheomelanin biosynthesis
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PWY-7917
phosphopantothenate biosynthesis I
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PANTO-PWY
pinoresinol degradation
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PWY-7982
protocatechuate degradation I (meta-cleavage pathway)
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P184-PWY
pyruvate fermentation to acetate VIII
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PWY-5768
pyruvate fermentation to acetoin III
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PWY3O-440
pyruvate fermentation to ethanol II
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PWY-5486
reductive glycine pathway of autotrophic CO2 fixation
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PWY-8303
sedoheptulose bisphosphate bypass
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PWY0-1517
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose degradation V (sucrose alpha-glucosidase)
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PWY66-373
syringate degradation
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PWY-6339
TCA cycle III (animals)
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PWY66-398
toluene degradation II (aerobic) (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
trans-caffeate degradation (aerobic)
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PWY-8003
vanillin and vanillate degradation I
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PWY-7097
vanillin and vanillate degradation II
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PWY-7098
vanillin biosynthesis I
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PWY-5665
xyloglucan degradation II (exoglucanase)
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PWY-6807
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ORGANISM
COMMENTARY 
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Sphingomonas paucimobilis SYK-6)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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