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Organism related
Word Map for Organism Rhodococcus sp.
- Rhodococcus sp.
- erythropolis
- desulfurization
- ethylbenzene
- hexahydro-1,3,5-trinitro-1,3,5-triazine
- o-xylene
- benzothiophene
- 2-hydroxybiphenyl
-
meta-cleavage
-
rhodococcal
TaxTree of Organism Rhodococcus sp.
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EC NUMBER 
COMMENTARY 
-
preliminary BRENDA-supplied EC number
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(R)-camphor degradation
-
-
P601-PWY
(S)-camphor degradation
-
-
PWY-6989
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,2,4,5-tetrachlorobenzene degradation
-
-
PWY-6099
1,2,4-trichlorobenzene degradation
-
-
PWY-6091
1,2-dichlorobenzene degradation
-
-
PWY-6090
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1,3-dichlorobenzene degradation
-
-
PWY-6081
1,4-dichlorobenzene degradation
-
-
14DICHLORBENZDEG-PWY
1,5-anhydrofructose degradation
-
-
PWY-6992
1,8-cineole degradation
-
-
6-HYDROXYCINEOLE-DEGRADATION-PWY
1-chloro-2-nitrobenzene degradation
-
-
PWY-7681
2,2'-dihydroxybiphenyl degradation
-
-
PWY-7009
2,4-dichlorotoluene degradation
-
-
PWY-6190
2,5-dichlorotoluene degradation
-
-
PWY-6191
2,5-xylenol and 3,5-xylenol degradation
-
-
PWY-7698
2,6-dinitrotoluene degradation
-
-
PWY-5643
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-hydroxybiphenyl degradation
-
-
PWY-7008
2-hydroxypenta-2,4-dienoate degradation
-
-
PWY-5162
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-methylpropene degradation
-
-
PWY-7778
2-nitrotoluene degradation
-
-
PWY-5641
3,4-dichlorobenzoate degradation
-
-
PWY-6217
3,4-dichlorotoluene degradation
-
-
PWY-6192
3-chlorobenzoate degradation II (via protocatechuate)
-
-
PWY-6216
3-chlorobenzoate degradation III (via gentisate)
-
-
PWY-6228
3-chlorotoluene degradation I
-
-
PWY-6103
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-methylquinoline degradation
-
-
PWY-721
4-aminobutanoate degradation V
-
-
PWY-5022
4-chlorobenzoate degradation
-
-
PWY-6215
4-chloronitrobenzene degradation
-
-
PWY-5645
4-coumarate degradation (aerobic)
-
-
PWY-8002
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxymandelate degradation
4-methylcatechol degradation (ortho cleavage)
-
-
PWY-6185
4-methylphenol degradation to protocatechuate
-
-
PWY-7700
4-nitrophenol degradation II
-
-
PWY-5488
4-sulfocatechol degradation
-
-
PWY-6041
5,6-dimethylbenzimidazole biosynthesis I (aerobic)
-
-
PWY-5523
5-nitroanthranilate degradation
-
-
PWY-7044
acetaldehyde biosynthesis I
-
-
PWY-6333
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetylene degradation (anaerobic)
-
-
P161-PWY
acrylonitrile degradation I
-
-
PWY-7308
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
adipate degradation
-
-
PWY-8354
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aldoxime degradation
-
-
P345-PWY
allopregnanolone biosynthesis
-
-
PWY-7455
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia oxidation I (aerobic)
-
-
AMMOXID-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
ammonia oxidation III
-
-
PWY-2242
androstenedione degradation I (aerobic)
-
-
PWY-6944
androstenedione degradation II (anaerobic)
-
-
PWY-8152
arachidonate metabolites biosynthesis
-
-
PWY-8397
arsenic detoxification (mammals)
-
-
PWY-4202
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
avenanthramide biosynthesis
-
-
PWY-8157
backdoor pathway of androgen biosynthesis
-
-
PWY-8200
bacterial bioluminescence
-
-
PWY-7723
benzene degradation I (aerobic)
-
-
PWY-5450
benzoate degradation I (aerobic)
-
-
PWY-2503
bile acid biosynthesis, neutral pathway
biphenyl degradation
-
-
PWY5F9-12
bisphenol A degradation
-
-
PWY-7757
bupropion degradation
-
-
PWY66-241
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
camalexin biosynthesis
-
-
CAMALEXIN-SYN
capsiconiate biosynthesis
-
-
PWY-6027
carbaryl degradation
-
-
PWY-8111
carbazole degradation
-
-
PWY-6550
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
catechol degradation to beta-ketoadipate
-
-
CATECHOL-ORTHO-CLEAVAGE-PWY
cellulose degradation II (fungi)
-
-
PWY-6788
chitin deacetylation
-
-
PWY-7118
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
chlorobenzene degradation
-
-
PWY-6083
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
-
-
PWY-6946
cholesterol degradation to androstenedione III (anaerobic)
-
-
PWY-8151
cyanophycin metabolism
-
-
PWY-7052
cyanuric acid degradation I
-
-
PWY-8025
cyanuric acid degradation II
-
-
PWY-5169
cyclohexanol degradation
daidzein conjugates interconversion
-
-
PWY-2343
daidzin and daidzein degradation
-
-
PWY-6996
degradation of aromatic, nitrogen containing compounds
-
-
dibenzofuran degradation
-
-
P662-PWY
dibenzothiophene desulfurization
-
-
PWY-681
diphenyl ethers degradation
-
-
PWY-7747
docosahexaenoate metabolites biosynthesis
-
-
PWY-8400
dTDP-3-acetamido-3,6-dideoxy-alpha-D-glucose biosynthesis
-
-
PWY-7318
dTDP-3-acetamido-alpha-D-fucose biosynthesis
-
-
PWY-6953
dTDP-4-O-demethyl-beta-L-noviose biosynthesis
-
-
PWY-7301
dTDP-6-deoxy-alpha-D-allose biosynthesis
-
-
PWY-7413
dTDP-alpha-D-forosamine biosynthesis
-
-
PWY-6808
dTDP-alpha-D-mycaminose biosynthesis
-
-
PWY-7414
dTDP-alpha-D-olivose, dTDP-alpha-D-oliose and dTDP-alpha-D-mycarose biosynthesis
-
-
PWY-6973
dTDP-alpha-D-ravidosamine and dTDP-4-acetyl-alpha-D-ravidosamine biosynthesis
-
-
PWY-7688
dTDP-beta-D-fucofuranose biosynthesis
-
-
PWY-7312
dTDP-beta-L-4-epi-vancosamine biosynthesis
-
-
PWY-7440
dTDP-beta-L-digitoxose biosynthesis
-
-
PWY-7657
dTDP-beta-L-megosamine biosynthesis
-
-
PWY-7104
dTDP-beta-L-mycarose biosynthesis
-
-
PWY-6976
dTDP-beta-L-olivose biosynthesis
-
-
PWY-6974
dTDP-beta-L-rhamnose biosynthesis
-
-
DTDPRHAMSYN-PWY
dTDP-D-desosamine biosynthesis
-
-
PWY-6942
dTDP-L-daunosamine biosynthesis
-
-
PWY-7814
dTDP-N-acetylthomosamine biosynthesis
-
-
PWY-7315
dTDP-N-acetylviosamine biosynthesis
-
-
PWY-7316
dTDP-sibirosamine biosynthesis
-
-
PWY-8380
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene and chloroethene degradation
-
-
PWY-7776
ethene biosynthesis IV (engineered)
-
-
PWY-7126
fatty acid salvage
-
-
PWY-7094
Fe(II) oxidation
-
-
PWY-6692
fluoroacetate and fluorothreonine biosynthesis
-
-
PWY-6644
formaldehyde oxidation II (glutathione-dependent)
-
-
PWY-1801
formate oxidation to CO2
-
-
PWY-1881
formate to nitrite electron transfer
-
-
PWY0-1585
formononetin conjugates interconversion
-
-
PWY-2904
gamma-hexachlorocyclohexane degradation
-
-
GAMMAHEXCHLORDEG-PWY
genistein conjugates interconversion
-
-
PWY-2345
gentisate degradation I
-
-
PWY-6223
gentisate degradation II
-
-
PWY-7469
gliotoxin biosynthesis
-
-
PWY-7533
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
guanine and guanosine salvage I
-
-
PWY-6620
guanosine nucleotides degradation III
-
-
PWY-6608
heterolactic fermentation
-
-
P122-PWY
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis III (bacteria)
-
-
PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
PWY-5026
inosine 5'-phosphate degradation
-
-
PWY-5695
isoflavonoid biosynthesis I
-
-
PWY-2002
isoflavonoid biosynthesis II
-
-
PWY-2083
isoprene degradation
-
-
PWY-7777
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)
-
-
ARGDEG-III-PWY
L-arginine degradation X (arginine monooxygenase pathway)
-
-
ARGDEG-V-PWY
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
-
-
PWY-8190
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-lysine degradation V
-
-
PWY-5283
L-lysine degradation XI
-
-
LYSINE-DEG1-PWY
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
linoleate metabolites biosynthesis
-
-
PWY-8395
lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing)
-
-
PWY2B4Q-4
lipid IVA biosynthesis (E. coli)
-
-
NAGLIPASYN-PWY
lipid IVA biosynthesis (generic)
-
-
PWY-8283
lipid IVA biosynthesis (H. pylori)
-
-
PWYI-14
lipid IVA biosynthesis (P. gingivalis)
-
-
PWY-8245
lipid IVA biosynthesis (P. putida)
-
-
PWY-8073
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor)
-
-
PWY2G6Z-2
m-cresol degradation
-
-
M-CRESOL-DEGRADATION-PWY
manganese oxidation I
-
-
PWY-6591
maresin biosynthesis
-
-
PWY-8356
melamine degradation
-
-
PWY-5170
melatonin degradation I
-
-
PWY-6398
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylaspartate cycle
methylsalicylate degradation
-
-
PWY18C3-24
mixed acid fermentation
-
-
FERMENTATION-PWY
mRNA capping I
-
-
PWY-7375
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
naphthalene degradation (aerobic)
-
-
PWY-5427
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrobenzene degradation II
-
-
PWY-5640
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
octane oxidation
oleate beta-oxidation
-
-
PWY0-1337
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
penicillin G and penicillin V biosynthesis
-
-
PWY-7716
pentachlorophenol degradation
-
-
PCPDEG-PWY
phenylacetate degradation I (aerobic)
-
-
PWY0-321
phenylacetate degradation II (anaerobic)
-
-
PWY-1341
phenylethanol biosynthesis
-
-
PWY-5751
phenylmercury acetate degradation
phenylpropanoid biosynthesis
-
-
PWY-361
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phosalacine biosynthesis
-
-
PWY-7769
phosphinothricin tripeptide biosynthesis
-
-
PWY-6322
phospholipases
-
-
LIPASYN-PWY
photosynthesis light reactions
-
-
PWY-101
phytol degradation
-
-
PWY66-389
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
poly-hydroxy fatty acids biosynthesis
-
-
PWY-6710
polybrominated dihydroxylated diphenyl ethers biosynthesis
-
-
PWY-7934
propane degradation I
-
-
PWY-7774
propane degradation II
-
-
PWY-7775
propene degradation
-
-
PWY-5534
protocatechuate degradation I (meta-cleavage pathway)
-
-
P184-PWY
protocatechuate degradation II (ortho-cleavage pathway)
-
-
PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY
prunasin and amygdalin biosynthesis
-
-
PWY-7824
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
purine ribonucleosides degradation
-
-
PWY0-1296
putrescine biosynthesis II
-
-
PWY-43
pyrimidine deoxyribonucleotides de novo biosynthesis III
-
-
PWY-6545
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
quercetin glucoside degradation (Allium)
-
-
PWY-7133
reactive oxygen species degradation
-
-
DETOX1-PWY-1
retinol biosynthesis
-
-
PWY-6857
rosmarinic acid biosynthesis I
-
-
PWY-5048
rutin degradation (plants)
-
-
PWY-7134
salicylate degradation II
-
-
PWY-6224
salicylate degradation IV
-
-
PWY-6640
salicylate glucosides biosynthesis II
-
-
PWY-6623
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
serotonin degradation
-
-
PWY-6313
sophorosyloxydocosanoate deacetylation
-
-
SOPHOROSYLOXYDOCOSANOATE-DEG-PWY
sphingolipid biosynthesis (mammals)
-
-
PWY-7277
sphingomyelin metabolism
-
-
PWY3DJ-11281
spongiadioxin C biosynthesis
-
-
PWY-7935
sterol:steryl ester interconversion (yeast)
-
-
PWY-7424
styrene degradation
-
-
PWY-6941
suberin monomers biosynthesis
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
taurine biosynthesis I
-
-
PWY-5331
taurine biosynthesis II
-
-
PWY-7850
taxol biosynthesis
terephthalate degradation
-
-
PWY-7795
testosterone and androsterone degradation to androstendione (aerobic)
-
-
PWY-6943
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
triacylglycerol degradation
-
-
LIPAS-PWY
two-component alkanesulfonate monooxygenase
-
-
ALKANEMONOX-PWY
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
vitamin K-epoxide cycle
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
4-hydroxymandelate degradation
-
-
4-HYDROXYMANDELATE-DEGRADATION-PWY
bile acid biosynthesis, neutral pathway
-
-
PWY-6061
cyclohexanol degradation
-
-
CYCLOHEXANOL-OXIDATION-PWY
methylaspartate cycle
-
-
PWY-6728
octane oxidation
-
-
P221-PWY
phenylmercury acetate degradation
-
-
P641-PWY
suberin monomers biosynthesis
-
-
PWY-1121
taxol biosynthesis
-
-
PWY-5660
vitamin K-epoxide cycle
-
-
PWY-7999
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
2485, 7068, 12569, 12571, 34378, 137346, 137364, 137365, 209106, 209108, 209191, 247045, 286367, 286383, 288942, 349644, 349651, 349652, 390645, 396141, 438068, 438076, 438296, 438299, 438788, 439100, 439105, 637235, 646690, 646700, 646701, 646702, 648425, 648428, 648430, 648434, 648436, 648441, 648442, 648444, 648446, 648449, 648454, 652394, 654314, 655819, 657781, 659536, 661015, 662580, 665421, 669903, 671406, 671557, 672689, 672727, 673098, 673720, 674252, 676087, 677532, 677557, 680482, 680770, 684599, 687341, 687347, 693281, 695545, 696768, 698135, 698138, 699044, 699823, 701865, 703230, 703891, 705220, 708366, 710986, 711335, 711488, 711874, 712260, 714723, 715127, 715804, 716281, 717127, 718526, 718527, 718648, 725742, 729054, 729424, 730250, 730252, 730257, 731214, 741736, 746523, 749444
-
-
-
439412, 439413, 650108, 653322, 669639, 685187, 689927, 692028, 694267, 695729, 698483, 699760, 716276, 716824, 728856, 730421, 749905
SwissProt
-
675340, 685723, 712958, 713589, 719819, 726766, 728003, 733047, 733048, 736644, 737261, 737486, 738510, 741482
UniProt
alkB1 gene from Rhodococcus Q15; strains Q15 and NRRL B-16531, strain NRRL B-16531 (ATCC 15960) formerly Corynebacterium hydrocarboclastus
SwissProt
alkB2 gene from Rhodococcus NRRL B-16531; strains Q15 and NRRL B-16531, strain NRRL B-16531 (ATCC 15960) formerly Corynebacterium hydrocarboclastus
SwissProt
alkB2 gene from Rhodococcus Q15; strains Q15 and NRRL B-16531, strain NRRL B-16531 (ATCC 15960) formerly Corynebacterium hydrocarboclastus
SwissProt
alkB3 gene from Rhodococcus Q15; strains Q15 and NRRL B-16531, strain NRRL B-16531 (ATCC 15960) formerly Corynebacterium hydrocarboclastus
SwissProt
alkB4 gene from Rhodococcus Q15; strains Q15 and NRRL B-16531, strain NRRL B-16531 (ATCC 15960) formerly Corynebacterium hydrocarboclastus
UniProt
gene styC, strain ST-5 has a gene cluster containing four open reading frames which encode styrene degradation enzymes
UniProt
isolated from brackish water of the Chilika Lake at Odisha state of India
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
Rhodococcus sp. MB1 is capable of utilizing cocaine as a sole source of carbon and nitrogen for growth
additional information
strain NCIMB 9784 is grown on (1R)-(+)-camphor as the sole carbon source
additional information
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optimization of conditions for cholesterol oxidase production by the microorganism isolated from urban compost and dairy soil samples, optimal conditions for production of enzyme CHO from Rhodococcus sp. strain COP2 are pH 7.5 and 35°C, effect of inorganic and organic nitrogen sources on enzyme production, overview
additional information
strain JDC-11 is capable of utilizing di-n-butyl phthalate and other phthalates as the sole source of carbon and energy, overview
additional information
strain NCIMB 12038 utilizes naphthalene as a sole source of carbon and energy
additional information
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the organism is able to utilize L-phosphinothricin as a sole source of nitrogen
additional information
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the strain is enriched from oil contaminated soil, in presence of dibenzothiophene as the sole sulfur source
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
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