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Information on Organism Rhodococcus rhodochrous

Synonyms:
ATCC 13808; ATCC 271 [["Rhodococcus roseus" (Grotenfelt 1889) Tsukamura 1974]]; "Bacterium mycoides roseum" Grotenfelt 1889; Bacterium mycoides roseum; CCUG 47165; CIP 104376; culture-collection:NRRL:B:16536; culture-collection:NRRL:B:2149; DSM 43241; DSM 43274 [["Rhodococcus roseus" (Grotenfelt 1889) Tsukamura 1974]]; "Gordona rosea" (Grotenfelt 1889) Tsukamura 1973; Gordona rosea; HAMBI 1959; IEGM 62; IFO 16069; IMET 7374; JCM 2156 [["Rhodococcus roseus" (Grotenfelt 1889) Tsukamura 1974]]; JCM 3202; LMG 5365; LMG:5365; NBRC 16069; NCIB 11147; NCIB:11147; NCTC 10210; NRRL B-16536; NRRL B-2149; Rhodococcus rhodochrous isolate DY5; Rhodococcus rhodochrous isolate DY6; Rhodococcus rhodochrous; Rhodococcus rhodochrous str. J1; Rhodococcus rhodochrous (Zopf 1891) Tsukamura 1974 (Approved Lists 1980) emend. Rainey et al. 1995; Rhodococcus rhodochrous (Zopf, 1891) Tsukamura 1974 emend. Rainey et al. 1995 emend. Nouioui et al. 2018; Rhodococcus roseus (ex Tsukamura 1971) Tsukamura et al. 1991; "Rhodococcus roseus" (Grotenfelt 1889) Tsukamura 1974; Rhodococcus roseus; Staphylococcus rhodochrous; "Staphylococcus rhodochrous" Zopf 1891; VKM Ac-1227; VKM:Ac:1227; J1; "Gordona (sic) rosea" (Grotenfelt 1889) Tsukamura 1973;
Word Map for Organism Rhodococcus rhodochrous
TaxTree of Organism Rhodococcus rhodochrous
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Actinobacteria can be found in Brenda BRENDA pathways(phylum)
Actinomycetia can be found in Brenda BRENDA pathways(class)
Corynebacteriales can be found in Brenda BRENDA pathways(order)
Nocardiaceae can be found in Brenda BRENDA pathways(family)
Rhodococcus can be found in Brenda BRENDA pathways(genus)
Rhodococcus rhodochrous can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(R)-camphor degradation
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P601-PWY
(S)-camphor degradation
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-
PWY-6989
(S)-propane-1,2-diol degradation
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-
PWY-7013
1,2-dichloroethane degradation
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-
12DICHLORETHDEG-PWY
1,5-anhydrofructose degradation
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-
PWY-6992
2-hydroxybiphenyl degradation
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-
PWY-7008
2-methylcitrate cycle I
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-
PWY0-42
2-methylcitrate cycle II
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-
PWY-5747
2-methylpropene degradation
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-
PWY-7778
2-nitrotoluene degradation
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-
PWY-5641
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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CHLOROPHYLL-SYN
3-chlorocatechol degradation
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-
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-chlorobenzoate degradation
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PWY-6215
4-coumarate degradation (aerobic)
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PWY-8002
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-hydroxymandelate degradation
4-methylcatechol degradation (ortho cleavage)
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PWY-6185
4-methylphenol degradation to protocatechuate
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PWY-7700
4-nitrophenol degradation II
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PWY-5488
acetaldehyde biosynthesis I
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PWY-6333
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation II (to acetoacetate)
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PWY-5533
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetylene degradation (anaerobic)
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P161-PWY
acrylate degradation II
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PWY-8180
acrylonitrile degradation I
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PWY-7308
acrylonitrile degradation II
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PWY-7309
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic toluene degradation
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alanine metabolism
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Alanine, aspartate and glutamate metabolism
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aldoxime degradation
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P345-PWY
alpha-Linolenic acid metabolism
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-
Amaryllidacea alkaloids biosynthesis
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PWY-7826
Aminobenzoate degradation
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-
ammonia assimilation cycle I
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-
PWY-6963
ammonia assimilation cycle II
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PWY-6964
ammonia assimilation cycle III
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AMMASSIM-PWY
anandamide degradation
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PWY6666-1
androgen and estrogen metabolism
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androstenedione degradation I (aerobic)
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PWY-6944
androstenedione degradation II (anaerobic)
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PWY-8152
Arachidonic acid metabolism
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arachidonic acid metabolism
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Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Ascorbate and aldarate metabolism
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ascorbate metabolism
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Atrazine degradation
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Benzoate degradation
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beta-alanine biosynthesis II
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PWY-3941
beta-Alanine metabolism
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-
Biosynthesis of secondary metabolites
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-
Biosynthesis of siderophore group nonribosomal peptides
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biphenyl degradation
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PWY5F9-12
bisphenol A degradation
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PWY-7757
bupropion degradation
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PWY66-241
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
Caffeine metabolism
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-
camalexin biosynthesis
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CAMALEXIN-SYN
camphor degradation
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-
Caprolactam degradation
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-
carbazole degradation
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PWY-6550
catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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-
PWY-5419
catechol degradation to beta-ketoadipate
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CATECHOL-ORTHO-CLEAVAGE-PWY
chlorinated phenols degradation
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PWY-6197
Chloroalkane and chloroalkene degradation
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-
Chlorocyclohexane and chlorobenzene degradation
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chlorophyll a degradation I
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PWY-5098
chlorophyll a degradation II
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PWY-6927
chlorophyll a degradation III
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PWY-7164
chlorophyll metabolism
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-
cholesterol degradation to androstenedione I (cholesterol oxidase)
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PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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PWY-6946
cholesterol degradation to androstenedione III (anaerobic)
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PWY-8151
chorismate metabolism
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cyanide detoxification II
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PWY-7142
Cyanoamino acid metabolism
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cyclic electron flow
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PWY-8270
cyclohexanol degradation
Cysteine and methionine metabolism
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-
degradation of aromatic, nitrogen containing compounds
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-
degradation of hexoses
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-
dibenzothiophene desulfurization
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PWY-681
dimethyl sulfide degradation I
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-
PWY-6047
Dioxin degradation
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-
diphenyl ethers degradation
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PWY-7747
Drug metabolism - cytochrome P450
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-
Drug metabolism - other enzymes
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ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol fermentation
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-
ethanolamine utilization
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PWY0-1477
ethene and chloroethene degradation
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PWY-7776
Fatty acid degradation
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Fe(II) oxidation
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PWY-6692
Fluorobenzoate degradation
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-
formaldehyde oxidation
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formaldehyde oxidation II (glutathione-dependent)
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PWY-1801
Galactose metabolism
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gamma-hexachlorocyclohexane degradation
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GAMMAHEXCHLORDEG-PWY
gliotoxin biosynthesis
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PWY-7533
glutamate and glutamine metabolism
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-
Glutathione metabolism
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-
glutathione metabolism
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-
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
Glycerolipid metabolism
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-
glycine betaine biosynthesis III (plants)
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PWY1F-353
Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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-
Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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-
Glyoxylate and dicarboxylate metabolism
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heterolactic fermentation
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P122-PWY
IAA biosynthesis
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-
indole glucosinolate activation (herbivore attack)
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PWYQT-4476
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
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PWY-5026
isoleucine metabolism
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-
isoprene degradation
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PWY-7777
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
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-
PWY-8294
L-glutamine biosynthesis I
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GLNSYN-PWY
L-isoleucine biosynthesis IV
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PWY-5104
L-isoleucine degradation II
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-
PWY-5078
L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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-
PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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-
PWY3O-4108
L-valine degradation II
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-
PWY-5057
leucine metabolism
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-
Linoleic acid metabolism
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-
lipid metabolism
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-
manganese oxidation I
-
-
PWY-6591
melatonin degradation I
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-
PWY-6398
Metabolic pathways
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-
metabolism of disaccharids
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Metabolism of xenobiotics by cytochrome P450
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-
Methane metabolism
-
-
methionine metabolism
-
-
methyl indole-3-acetate interconversion
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-
PWY-6303
methylsalicylate degradation
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-
PWY18C3-24
Microbial metabolism in diverse environments
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-
mixed acid fermentation
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-
FERMENTATION-PWY
NADPH to cytochrome c oxidase via plastocyanin
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-
PWY-8271
Naphthalene degradation
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-
nicotine degradation IV
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-
PWY66-201
nicotine degradation V
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-
PWY66-221
Nitrogen metabolism
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-
nocardicin A biosynthesis
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-
PWY-7797
non-pathway related
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noradrenaline and adrenaline degradation
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PWY-6342
octane oxidation
Other glycan degradation
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-
Oxidative phosphorylation
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-
oxidative phosphorylation
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-
Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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-
Penicillin and cephalosporin biosynthesis
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pentachlorophenol degradation
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PCPDEG-PWY
phenol degradation
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-
phenol degradation I (aerobic)
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-
PWY-5418
Phenylalanine metabolism
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-
phenylalanine metabolism
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-
Phenylalanine, tyrosine and tryptophan biosynthesis
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phenylethanol biosynthesis
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-
PWY-5751
phosphopantothenate biosynthesis I
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-
PANTO-PWY
Photosynthesis
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-
photosynthesis
-
-
photosynthesis light reactions
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-
PWY-101
phytol degradation
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-
PWY66-389
polybrominated dihydroxylated diphenyl ethers biosynthesis
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-
PWY-7934
Porphyrin and chlorophyll metabolism
-
-
Propanoate metabolism
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propanol degradation
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-
propene degradation
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-
PWY-5534
protein S-nitrosylation and denitrosylation
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-
PWY-7798
Purine metabolism
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-
pyruvate fermentation to ethanol I
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-
PWY-5480
pyruvate fermentation to ethanol II
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-
PWY-5486
pyruvate fermentation to ethanol III
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-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
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-
PWY-7111
Pyruvate metabolism
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-
quinate degradation II
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-
PWY-6416
retinol biosynthesis
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-
PWY-6857
Retinol metabolism
-
-
rubber degradation I
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-
PWY-7924
rubber degradation II
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-
PWY-7925
saframycin A biosynthesis
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-
PWY-7671
salidroside biosynthesis
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-
PWY-6802
serotonin degradation
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-
PWY-6313
serotonin metabolism
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-
shikimate degradation II
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-
PWY-6419
Sphingolipid metabolism
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-
spongiadioxin C biosynthesis
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-
PWY-7935
Steroid degradation
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-
Steroid hormone biosynthesis
-
-
Styrene degradation
-
-
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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-
PWY1YI0-3
Sulfur metabolism
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-
superpathway of fermentation (Chlamydomonas reinhardtii)
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-
PWY4LZ-257
superpathway of methylsalicylate metabolism
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-
PWY18C3-25
testosterone degradation (anaerobic)
-
-
PWY-8155
Toluene degradation
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-
toluene degradation II (aerobic) (via 4-methylcatechol)
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-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
triacylglycerol degradation
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-
LIPAS-PWY
Tryptophan metabolism
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-
Tyrosine metabolism
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-
tyrosine metabolism
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-
Ubiquinone and other terpenoid-quinone biosynthesis
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-
urea cycle
-
-
urea degradation II
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-
PWY-5704
valine metabolism
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-
vanillin biosynthesis I
-
-
PWY-5665
vitamin K-epoxide cycle
Xylene degradation
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xyloglucan degradation II (exoglucanase)
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PWY-6807
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
cell growth on different steroids as a sole carbon and energy source with different isozymes, overview
Manually annotated by BRENDA team
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
-
partly, recombinant protein in Escherichia coli
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Rhodococcus rhodochrous)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA