Information on Organism Rhizobium sp.

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EC NUMBER
COMMENTARY hide
preliminary BRENDA-supplied EC number
deleted 2008. Now divided into EC 4.3.1.23 (tyrosine ammonia-lyase), EC 4.3.1.24 (phenylalanine ammonia-lyase) and EC 4.3.1.25 (phenylalanine/tyrosine ammonia-lyase)
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
Biosynthesis of secondary metabolites
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Histidine metabolism
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histidine metabolism
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Metabolic pathways
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alanine metabolism
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heterolactic fermentation
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L-alanine degradation II (to D-lactate)
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Microbial metabolism in diverse environments
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mixed acid fermentation
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Pyruvate metabolism
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superpathway of fermentation (Chlamydomonas reinhardtii)
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superpathway of glucose and xylose degradation
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vancomycin resistance I
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(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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2-methylpropene degradation
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3-hydroxypropanoate/4-hydroxybutanate cycle
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4-hydroxybenzoate biosynthesis III (plants)
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adipate degradation
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androstenedione degradation
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Benzoate degradation
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benzoyl-CoA degradation I (aerobic)
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Butanoate metabolism
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Caprolactam degradation
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Carbon fixation pathways in prokaryotes
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cholesterol degradation to androstenedione I (cholesterol oxidase)
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cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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CO2 fixation in Crenarchaeota
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crotonate fermentation (to acetate and cyclohexane carboxylate)
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fatty acid beta-oxidation I (generic)
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fatty acid beta-oxidation II (plant peroxisome)
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fatty acid beta-oxidation VI (mammalian peroxisome)
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Fatty acid degradation
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Fatty acid elongation
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fatty acid salvage
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Geraniol degradation
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glutaryl-CoA degradation
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L-glutamate degradation V (via hydroxyglutarate)
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lipid metabolism
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Lysine degradation
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methyl ketone biosynthesis (engineered)
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methyl tert-butyl ether degradation
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oleate beta-oxidation
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phenylacetate degradation (aerobic)
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phenylacetate degradation I (aerobic)
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pyruvate fermentation to butanoate
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pyruvate fermentation to butanol I
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pyruvate fermentation to butanol II (engineered)
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pyruvate fermentation to hexanol (engineered)
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Toluene degradation
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Tryptophan metabolism
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tryptophan metabolism
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Valine, leucine and isoleucine degradation
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carnitine metabolism
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D-carnitine degradation II
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L-carnitine degradation II
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Entner Doudoroff pathway
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Methane metabolism
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methanol oxidation to carbon dioxide
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methanol oxidation to formaldehyde II
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glucose and glucose-1-phosphate degradation
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glucose degradation (oxidative)
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glycogen metabolism
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L-ascorbate biosynthesis VI (engineered pathway)
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Pentose phosphate pathway
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ketogluconate metabolism
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lactose degradation II
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metabolism of disaccharids
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Starch and sucrose metabolism
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sucrose degradation VII (sucrose 3-dehydrogenase)
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4-aminobutanoate degradation III
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Alanine, aspartate and glutamate metabolism
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glutamate and glutamine metabolism
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Nicotinate and nicotinamide metabolism
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Tyrosine metabolism
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Ascorbate and aldarate metabolism
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D-arabinose degradation III
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D-galactarate degradation II
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D-galacturonate degradation II
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D-glucarate degradation II
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D-glucuronate degradation II
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D-xylose degradation III
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D-xylose degradation V
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degradation of pentoses
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L-arabinose degradation III
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L-lyxonate degradation
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Pentose and glucuronate interconversions
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trans-4-hydroxy-L-proline degradation II
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acetate fermentation
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acetyl-CoA biosynthesis II (NADP-dependent pyruvate dehydrogenase)
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oxidative decarboxylation of pyruvate
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Glyoxylate and dicarboxylate metabolism
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1,4-dichlorobenzene degradation
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2,4,5-trichlorophenoxyacetate degradation
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2,4,6-trichlorophenol degradation
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3,4,6-trichlorocatechol degradation
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3,5-dichlorocatechol degradation
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3-chlorocatechol degradation
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3-chlorocatechol degradation I (ortho)
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3-chlorocatechol degradation II (ortho)
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4,5-dichlorocatechol degradation
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4-aminophenol degradation
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4-chlorocatechol degradation
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4-hydroxyacetophenone degradation
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4-nitrophenol degradation I
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4-nitrophenol degradation II
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4-sulfocatechol degradation
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Chlorocyclohexane and chlorobenzene degradation
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chlorosalicylate degradation
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Fluorobenzoate degradation
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gamma-hexachlorocyclohexane degradation
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gamma-resorcylate degradation I
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gamma-resorcylate degradation II
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pentachlorophenol degradation
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resorcinol degradation
L-alanine degradation IV
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Taurine and hypotaurine metabolism
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4-aminobutanoate degradation V
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Arginine biosynthesis
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ethylene biosynthesis IV (engineered)
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L-glutamate degradation I
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methylaspartate cycle
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Nitrogen metabolism
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L-glutamate biosynthesis III
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nitrate reduction V (assimilatory)
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nitrate reduction VI (assimilatory)
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partial TCA cycle (obligate autotrophs)
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L-glutamate biosynthesis I
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L-glutamine degradation II
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Arginine and proline metabolism
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beta-alanine biosynthesis I
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histamine degradation
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N-methyl-Delta1-pyrrolinium cation biosynthesis
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methane metabolism
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nitrate reduction II (assimilatory)
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denitrification
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nitrate reduction I (denitrification)
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nitrate reduction VII (denitrification)
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nitrifier denitrification
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Glutathione metabolism
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glutathione metabolism
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glutathione-peroxide redox reactions
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assimilatory sulfate reduction I
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sulfate reduction
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Sulfur metabolism
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assimilatory sulfate reduction III
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Isoquinoline alkaloid biosynthesis
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o-diquinones biosynthesis
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ethanol degradation IV
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methanol oxidation to formaldehyde IV
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non-pathway related
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reactive oxygen species degradation
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superoxide radicals degradation
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baicalein degradation (hydrogen peroxide detoxification)
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betanidin degradation
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justicidin B biosynthesis
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luteolin triglucuronide degradation
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matairesinol biosynthesis
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Phenylpropanoid biosynthesis
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sesamin biosynthesis
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ascorbate metabolism
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L-ascorbate degradation II (bacterial, aerobic)
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L-ascorbate degradation III
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L-ascorbate degradation V
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hydrogen oxidation I (aerobic)
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hydrogen production
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Nitrotoluene degradation
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2-nitrotoluene degradation
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catechol degradation to 2-hydroxypentadienoate I
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catechol degradation to 2-hydroxypentadienoate II
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phenol degradation
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Styrene degradation
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toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol)
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toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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Xylene degradation
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4-hydroxymandelate degradation
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gallate degradation
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Polycyclic aromatic hydrocarbon degradation
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protocatechuate degradation II (ortho-cleavage pathway)
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methane oxidation to methanol I
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nitrite-dependent anaerobic methane oxidation
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1,5-anhydrofructose degradation
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acetone degradation I (to methylglyoxal)
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acetone degradation III (to propane-1,2-diol)
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Amaryllidacea alkaloids biosynthesis
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Aminobenzoate degradation
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Arachidonic acid metabolism
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arachidonic acid metabolism
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bupropion degradation
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Caffeine metabolism
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Drug metabolism - cytochrome P450
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Linoleic acid metabolism
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melatonin degradation I
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Metabolism of xenobiotics by cytochrome P450
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nicotine degradation IV
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nicotine degradation V
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Retinol metabolism
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Steroid hormone biosynthesis
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vanillin biosynthesis I
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bacterial bioluminescence
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ethylene biosynthesis III (microbes)
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Purine metabolism
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purine metabolism
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Pyrimidine metabolism
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Chloroalkane and chloroalkene degradation
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nitrate assimilation
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nitrogen fixation I (ferredoxin)
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arsenite oxidation I (respiratory)
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arsenite oxidation II (respiratory)
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methylhalides biosynthesis (plants)
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L-arginine biosynthesis I (via L-ornithine)
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L-arginine biosynthesis II (acetyl cycle)
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L-arginine biosynthesis IV (archaebacteria)
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L-citrulline biosynthesis
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L-citrulline degradation
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L-proline biosynthesis II (from arginine)
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urea cycle
2-deoxy-D-ribose degradation II
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acetoacetate degradation (to acetyl CoA)
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acetyl-CoA fermentation to butanoate II
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butanoate fermentation
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ethylmalonyl-CoA pathway
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isoprene biosynthesis II (engineered)
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isopropanol biosynthesis (engineered)
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ketogenesis
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ketolysis
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L-lysine fermentation to acetate and butanoate
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mevalonate metabolism
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mevalonate pathway I
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mevalonate pathway II (archaea)
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mevalonate pathway III (archaea)
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polyhydroxybutanoate biosynthesis
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Propanoate metabolism
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pyruvate fermentation to acetone
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Synthesis and degradation of ketone bodies
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Terpenoid backbone biosynthesis
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(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
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(8E,10E)-dodeca-8,10-dienol biosynthesis
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10-cis-heptadecenoyl-CoA degradation (yeast)
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10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
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10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
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4-ethylphenol degradation (anaerobic)
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4-oxopentanoate degradation
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9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
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alpha-Linolenic acid metabolism
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Biosynthesis of unsaturated fatty acids
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docosahexaenoate biosynthesis III (6-desaturase, mammals)
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Ethylbenzene degradation
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fatty acid beta-oxidation VII (yeast peroxisome)
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fermentation to 2-methylbutanoate
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jasmonic acid biosynthesis
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L-isoleucine degradation I
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sitosterol degradation to androstenedione
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aromatic polyketides biosynthesis
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flavonoid biosynthesis
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Flavonoid biosynthesis
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flavonoid biosynthesis (in equisetum)
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flavonoid di-C-glucosylation
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naringenin biosynthesis (engineered)
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phloridzin biosynthesis
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xanthohumol biosynthesis
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protein ubiquitination
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Citrate cycle (TCA cycle)
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citric acid cycle
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ethylene biosynthesis V (engineered)
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glyoxylate cycle
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L-glutamine biosynthesis III
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TCA cycle I (prokaryotic)
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TCA cycle II (plants and fungi)
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TCA cycle III (animals)
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TCA cycle IV (2-oxoglutarate decarboxylase)
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TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
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TCA cycle VI (Helicobacter)
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TCA cycle VII (acetate-producers)
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sucrose biosynthesis I (from photosynthesis)
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sucrose biosynthesis II
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sucrose biosynthesis III
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lipid A biosynthesis
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lipid A-core biosynthesis (E. coli K-12)
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complex N-linked glycan biosynthesis (vertebrates)
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Glycosaminoglycan biosynthesis - keratan sulfate
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N-Glycan biosynthesis
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Various types of N-glycan biosynthesis
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ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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biosynthesis of Lewis epitopes (H. pylori)
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Glycosphingolipid biosynthesis - globo and isoglobo series
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Glycosphingolipid biosynthesis - lacto and neolacto series
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lacto-series glycosphingolipids biosynthesis
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NAD metabolism
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Glycerolipid metabolism
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Glycerophospholipid metabolism
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phosphatidate metabolism, as a signaling molecule
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type I lipoteichoic acid biosynthesis (S. aureus)
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3-phosphoinositide biosynthesis
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Inositol phosphate metabolism
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creatine-phosphate biosynthesis
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assimilatory sulfate reduction II
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dissimilatory sulfate reduction I (to hydrogen sufide))
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dissimilatory sulfate reduction II (to thiosulfate)
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Monobactam biosynthesis
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selenate reduction
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Selenocompound metabolism
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sulfate activation for sulfonation
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sulfite oxidation III
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dopamine degradation
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serotonin degradation
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thyroid hormone metabolism II (via conjugation and/or degradation)
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Drug metabolism - other enzymes
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methyl indole-3-acetate interconversion
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methylsalicylate degradation
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retinol biosynthesis
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superpathway of methylsalicylate metabolism
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triacylglycerol degradation
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acyl-CoA hydrolysis
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cutin biosynthesis
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oleate biosynthesis II (animals and fungi)
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palmitate biosynthesis (animals and fungi, cytoplasm)
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sporopollenin precursors biosynthesis
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stearate biosynthesis I (animals)
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stearate biosynthesis III (fungi)
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suberin monomers biosynthesis
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diethylphosphate degradation
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Folate biosynthesis
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sulfopterin metabolism
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Thiamine metabolism
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2-arachidonoylglycerol biosynthesis
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Ether lipid metabolism
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phospholipases
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plasmalogen biosynthesis
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plasmalogen degradation
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choline biosynthesis III
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glycine betaine biosynthesis
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cellulose degradation
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cellulose degradation II (fungi)
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(1,4)-beta-D-xylan degradation
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cellulose and hemicellulose degradation (cellulolosome)
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d-xylose degradation
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Amino sugar and nucleotide sugar metabolism
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chitin degradation I (archaea)
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chitin degradation II (Vibrio)
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chitin degradation III (Serratia)
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Galactose metabolism
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glycogen degradation I
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starch degradation
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starch degradation I
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Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Other glycan degradation
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Sphingolipid metabolism
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xyloglucan degradation II (exoglucanase)
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trehalose degradation II (cytosolic)
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trehalose degradation VI (periplasmic)
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beta-D-glucuronide and D-glucuronate degradation
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degradation of sugar acids
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Flavone and flavonol biosynthesis
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Porphyrin and chlorophyll metabolism
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fructan degradation
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Fructose and mannose metabolism
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trehalose biosynthesis V
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acrylonitrile degradation I
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arginine metabolism
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degradation of aromatic, nitrogen containing compounds
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IAA biosynthesis
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indole-3-acetate biosynthesis II
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indole-3-acetate biosynthesis III (bacteria)
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indole-3-acetate biosynthesis IV (bacteria)
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L-arginine degradation X (arginine monooxygenase pathway)
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Phenylalanine metabolism
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Atrazine degradation
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urea degradation II
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chitin degradation to ethanol
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chitobiose degradation
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lipid IVA biosynthesis (E. coli)
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lipid IVA biosynthesis (P. putida)
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Lipopolysaccharide biosynthesis
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Penicillin and cephalosporin biosynthesis
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atrazine degradation I (aerobic)
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Cyanoamino acid metabolism
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indole glucosinolate activation (herbivore attack)
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indole-3-acetate biosynthesis V (bacteria and fungi)
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acrylonitrile degradation II
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Cysteine and methionine metabolism
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orcinol degradation
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2-chloroacrylate degradation I
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1,2-dichloroethane degradation
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butachlor degradation
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fluoroacetate degradation
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atrazine degradation III
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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C4 photosynthetic carbon assimilation cycle, NADP-ME type
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C4 photosynthetic carbon assimilation cycle, PEPCK type
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Carbon fixation in photosynthetic organisms
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CO2 fixation into oxaloacetate (anaplerotic)
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formaldehyde assimilation I (serine pathway)
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gluconeogenesis
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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Methanobacterium thermoautotrophicum biosynthetic metabolism
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photosynthesis
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reductive TCA cycle I
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gluconeogenesis I
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Glycolysis / Gluconeogenesis
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superpathway of glyoxylate cycle and fatty acid degradation
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3,6-anhydro-alpha-L-galactopyranose degradation
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4-deoxy-L-threo-hex-4-enopyranuronate degradation
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D-fructuronate degradation
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D-galacturonate degradation I
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D-glucosaminate degradation
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Entner-Doudoroff pathway III (semi-phosphorylative)
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Entner-Doudoroff shunt
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L-arabinose degradation IV
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cysteine metabolism
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Glycine, serine and threonine metabolism
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homocysteine and cysteine interconversion
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hydrogen sulfide biosynthesis II (mammalian)
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L-cysteine biosynthesis III (from L-homocysteine)
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L-cysteine biosynthesis VI (from L-methionine)
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d-mannose degradation
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GDP-6-deoxy-D-talose biosynthesis
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GDP-D-perosamine biosynthesis
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GDP-D-rhamnose biosynthesis
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GDP-L-colitose biosynthesis
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GDP-L-fucose biosynthesis I (from GDP-D-mannose)
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GDP-mycosamine biosynthesis
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benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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cinnamoyl-CoA biosynthesis
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ephedrine biosynthesis
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phenylpropanoid biosynthesis
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phenylpropanoid biosynthesis, initial reactions
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rosmarinic acid biosynthesis I
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suberin monomers biosynthesis
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colanic acid building blocks biosynthesis
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D-galactose degradation I (Leloir pathway)
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D-galactose detoxification
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degradation of hexoses
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mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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stachyose degradation
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superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
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UDP-alpha-D-galactose biosynthesis
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ammonia assimilation cycle I
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ammonia assimilation cycle II
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L-glutamine biosynthesis I
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beta-Alanine metabolism
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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phosphopantothenate biosynthesis I
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(S)-lactate fermentation to propanoate, acetate and hydrogen
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anapleurotic synthesis of oxalacetate
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gluconeogenesis III
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incomplete reductive TCA cycle
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aerobic respiration I (cytochrome c)
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aerobic respiration II (cytochrome c) (yeast)
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ammonia oxidation IV (autotrophic ammonia oxidizers)
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Fe(II) oxidation
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formate to nitrite electron transfer
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nitrate reduction X (dissimilatory, periplasmic)
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Oxidative phosphorylation
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oxidative phosphorylation
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ATP biosynthesis
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Photosynthesis
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oleandomycin activation/inactivation
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LINKS TO OTHER DATABASES (specific for Rhizobium sp.)