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Information on Organism Rattus sp.

rats; Rattus sp.;

TaxTree of Organism Rattus sp.

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cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Opisthokonta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(kingdom)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

Deuterostomia can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(phylum)

can be found in Brenda

(subphylum)

Vertebrata can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Gnathostomata can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Teleostomi can be found in Brenda

can be found in Brenda

(clade)

Euteleostomi can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Sarcopterygii can be found in Brenda

can be found in Brenda

BRENDA pathways

(superclass)

Dipnotetrapodomorpha can be found in Brenda

can be found in Brenda

(clade)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(class)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

Boreoeutheria can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Euarchontoglires can be found in Brenda

can be found in Brenda

BRENDA pathways

(superorder)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(order)

can be found in Brenda

BRENDA pathways

(suborder)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(family)

can be found in Brenda

BRENDA pathways

(subfamily)

can be found in Brenda

BRENDA pathways

(genus)

unclassified Rattus can be found in Brenda

can be found in Brenda

can be found in Brenda

BRENDA pathways

(species)

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10-cis-heptadecenoyl-CoA degradation (yeast)

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PWY-7337

10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)

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PWY-7338

11-oxyandrogens biosynthesis

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PWY-8202

2-deoxy-D-ribose degradation II

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PWY-8058

3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)

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CHLOROPHYLL-SYN

3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)

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PWY-7159

3-hydroxy-4-methyl-anthranilate biosynthesis I

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PWY-7717

3-hydroxy-4-methyl-anthranilate biosynthesis II

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PWY-7765

3-hydroxyquinaldate biosynthesis

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PWY-7733

9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)

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PWY-7340

adenosine nucleotides degradation I

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PWY-6596

adenosine nucleotides degradation II

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SALVADEHYPOX-PWY

aerobic respiration I (cytochrome c)

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PWY-3781

aerobic respiration II (cytochrome c) (yeast)

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PWY-7279

alpha-tomatine degradation

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PWY18C3-5

arsenite to oxygen electron transfer

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PWY-4521

arsenite to oxygen electron transfer (via azurin)

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PWY-7429

Biosynthesis of secondary metabolites

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Butanoate metabolism

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caffeine degradation III (bacteria, via demethylation)

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PWY-6538

cardiolipin biosynthesis

cardiolipin biosynthesis

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cardiolipin biosynthesis I

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PWY-5668

cardiolipin biosynthesis II

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PWY-5269

cardiolipin biosynthesis III

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PWY0-1545

cellulose degradation

cellulose degradation

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cellulose degradation II (fungi)

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PWY-6788

cholesterol biosynthesis

cholesterol biosynthesis

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cholesterol biosynthesis (diatoms)

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PWY-8239

cholesterol biosynthesis I

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PWY66-341

cholesterol biosynthesis II (via 24,25-dihydrolanosterol)

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PWY66-3

coumarin biosynthesis (via 2-coumarate)

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PWY-5176

Cyanoamino acid metabolism

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d-mannose degradation

d-mannose degradation

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daidzein conjugates interconversion

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PWY-2343

daidzin and daidzein degradation

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PWY-6996

degradation of hexoses

degradation of hexoses

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diethylphosphate degradation

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PWY-5491

Drug metabolism - cytochrome P450

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dZTP biosynthesis

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PWY-8289

fatty acid beta-oxidation I (generic)

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FAO-PWY

fatty acid beta-oxidation III (unsaturated, odd number)

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PWY-5137

fatty acid beta-oxidation IV (unsaturated, even number)

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PWY-5138

fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)

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PWY-6837

Fatty acid degradation

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Fe(II) oxidation

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PWY-6692

firefly bioluminescence

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PWY-7913

Folate biosynthesis

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formononetin conjugates interconversion

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PWY-2904

Galactose metabolism

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genistein conjugates interconversion

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PWY-2345

ginsenoside metabolism

ginsenoside metabolism

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glutathione-mediated detoxification II

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PWY-6842

Glycerophospholipid metabolism

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glycine metabolism

glycine metabolism

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Glyoxylate and dicarboxylate metabolism

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guanosine nucleotides degradation I

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PWY-6607

guanosine nucleotides degradation II

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PWY-6606

guanosine nucleotides degradation III

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PWY-6608

heme b biosynthesis I (aerobic)

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HEME-BIOSYNTHESIS-II

heme b biosynthesis V (aerobic)

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HEME-BIOSYNTHESIS-II-1

heme metabolism

heme metabolism

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inosine 5'-phosphate degradation

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PWY-5695

L-asparagine degradation III (mammalian)

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ASPARAGINE-DEG1-PWY-1

L-tryptophan degradation I (via anthranilate)

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TRPCAT-PWY

L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde

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PWY-5651

L-tryptophan degradation XI (mammalian, via kynurenine)

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PWY-6309

linamarin degradation

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PWY-3121

linustatin bioactivation

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PWY-7091

lipid metabolism

lipid metabolism

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lotaustralin degradation

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PWY-6002

Metabolic pathways

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Metabolism of xenobiotics by cytochrome P450

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Microbial metabolism in diverse environments

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NADPH to cytochrome c oxidase via plastocyanin

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PWY-8271

neolinustatin bioactivation

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PWY-7092

Nicotinate and nicotinamide metabolism

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non-pathway related

non-pathway related

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oleate beta-oxidation

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PWY0-1337

oleate beta-oxidation (isomerase-dependent, yeast)

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PWY-7291

oleate beta-oxidation (reductase-dependent, yeast)

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PWY-7307

oleate beta-oxidation (thioesterase-dependent, yeast)

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PWY-7292

Other glycan degradation

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Oxidative phosphorylation

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oxidative phosphorylation

oxidative phosphorylation

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Pantothenate and CoA biosynthesis

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Phenylpropanoid biosynthesis

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phosphatidylcholine resynthesis via glycerophosphocholine

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PWY-7367

phosphatidylglycerol biosynthesis I

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PWY4FS-7

phosphatidylglycerol biosynthesis II

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PWY4FS-8

phospholipid remodeling (phosphatidylethanolamine, yeast)

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PWY-7409

photorespiration I

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PWY-181

Porphyrin and chlorophyll metabolism

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Purine metabolism

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purine metabolism

purine metabolism

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purine nucleobases degradation II (anaerobic)

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PWY-5497

pyrimidine deoxyribonucleotides de novo biosynthesis I

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PWY-7184

pyrimidine deoxyribonucleotides de novo biosynthesis II

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PWY-7187

pyrimidine deoxyribonucleotides de novo biosynthesis III

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PWY-6545

pyrimidine deoxyribonucleotides dephosphorylation

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PWY-7206

Pyrimidine metabolism

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quercetin glucoside degradation (Allium)

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PWY-7133

quinoxaline-2-carboxylate biosynthesis

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PWY-7734

Retinol metabolism

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Riboflavin metabolism

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rutin degradation (plants)

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PWY-7134

Starch and sucrose metabolism

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Steroid biosynthesis

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Steroid hormone biosynthesis

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sterol:steryl ester interconversion (yeast)

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PWY-7424

succinate to chytochrome c oxidase via cytochrome c6

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PWY1YI0-2

succinate to cytochrome c oxidase via plastocyanin

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PWY1YI0-3

sulfopterin metabolism

sulfopterin metabolism

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sulfur volatiles biosynthesis

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PWY-6736

superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)

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PWY0-166

tetrapyrrole biosynthesis I (from glutamate)

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PWY-5188

tetrapyrrole biosynthesis II (from glycine)

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PWY-5189

theophylline degradation

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PWY-6999

Thiamine metabolism

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thyroid hormone metabolism I (via deiodination)

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PWY-6260

thyroid hormone metabolism II (via conjugation and/or degradation)

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PWY-6261

Tryptophan metabolism

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tryptophan metabolism

tryptophan metabolism

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tunicamycin biosynthesis

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PWY-7821

type I lipoteichoic acid biosynthesis (S. aureus)

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PWY-7817

Tyrosine metabolism

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Valine, leucine and isoleucine degradation

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Vitamin B6 metabolism

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xyloglucan degradation II (exoglucanase)

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PWY-6807

zymosterol biosynthesis

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PWY-6074

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Manually annotated by BRENDA team

show

brown adipose tissue

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thyronine 5'-deiodinase type II

639406, 639409, 639411, 639416

Manually annotated by BRENDA team

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highest activity

Manually annotated by BRENDA team

show

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Manually annotated by BRENDA team

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Manually annotated by BRENDA team

show

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Manually annotated by BRENDA team

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Manually annotated by BRENDA team

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Manually annotated by BRENDA team

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29 and 33 months old rats show a 50% decrease of enzymatic activity

Manually annotated by BRENDA team

show

show

harderian gland

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thyronine 5'-deiodinase type II

Manually annotated by BRENDA team

show

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thyronine 5'-deiodinase type II

639406, 639409, 639411, 639416

Manually annotated by BRENDA team

intestinal mucosa

show

show

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thyronine 5'-deiodinase type II

Manually annotated by BRENDA team

show

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Manually annotated by BRENDA team

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temperature-stabile enzyme enriched

Manually annotated by BRENDA team

show

show

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Manually annotated by BRENDA team

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133826, 133827, 133833, 133861

Manually annotated by BRENDA team

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thyronine 5'-deiodinase type I

Manually annotated by BRENDA team

show

show

pancreatic juice

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Manually annotated by BRENDA team

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identification of zinc-binding protein identical to xanthine oxidoreductase of 85 kDa

Manually annotated by BRENDA team

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Manually annotated by BRENDA team

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Manually annotated by BRENDA team

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thyronine 5'-deiodinase type II

Manually annotated by BRENDA team

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Manually annotated by BRENDA team

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Manually annotated by BRENDA team

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81114, 95137, 326366

Manually annotated by BRENDA team

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Manually annotated by BRENDA team

show

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temperature-labile enzyme enriched

Manually annotated by BRENDA team

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0.2% activity of that in liver

Manually annotated by BRENDA team

skeletal muscle

show

small intestine

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Manually annotated by BRENDA team

show

show

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Manually annotated by BRENDA team

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thyronine 5'-deiodinase type II

Manually annotated by BRENDA team

show

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Manually annotated by BRENDA team

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95131, 95134, 95135, 136445

Manually annotated by BRENDA team

additional information

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208759, 208761, 208764, 209921

Manually annotated by BRENDA team

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134204, 209257, 390424, 390425

Manually annotated by BRENDA team

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endoplasmic reticulum

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Manually annotated by BRENDA team

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Golgi apparatus

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luminal fluid

Manually annotated by BRENDA team

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cis part

Manually annotated by BRENDA team

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95148, 133830, 133840, 133841, 133853, 134305, 136006, 136007, 208729, 208733, 209066

Manually annotated by BRENDA team

show

show

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Manually annotated by BRENDA team

mitochondrial membrane

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show

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Manually annotated by BRENDA team

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95148, 134204, 246825

Manually annotated by BRENDA team

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287560, 389680, 389687, 389694

Manually annotated by BRENDA team

plasma membrane

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.

Release 2023.1 (January 2023)