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Information on Organism Pyrobaculum aerophilum

Synonyms:
ATCC 51768; CIP 104966; DSM 7523; JCM 9630; NBRC 100827; Pyrobaculum aerophilum; Pyrobaculum aerophilum Volkl et al. 1996; strain IM2;
Word Map for Organism Pyrobaculum aerophilum
TaxTree of Organism Pyrobaculum aerophilum
Condensed Tree View
cellular organisms
Archaea can be found in Brenda BRENDA pathways(superkingdom)
TACK group can be found in Brenda BRENDA pathways(clade)
Crenarchaeota can be found in Brenda BRENDA pathways(phylum)
Thermoprotei can be found in Brenda BRENDA pathways(class)
Thermoproteales can be found in Brenda BRENDA pathways(order)
Thermoproteaceae can be found in Brenda (family)
Pyrobaculum can be found in Brenda BRENDA pathways(genus)
Pyrobaculum aerophilum can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(3R)-N-[(2S)-1-hydroxy-6-[(3R)-3-isocyanobutanamido]hexan-2-yl]-3-isocyanobutanamide biosynthesis
-
-
PWY-8320
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
1-butanol autotrophic biosynthesis (engineered)
-
-
PWY-6886
2-deoxy-alpha-D-ribose 1-phosphate degradation
-
-
PWY-7180
2-deoxy-D-ribose degradation I
-
-
PWY-8060
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-oxobutanoate degradation I
-
-
PWY-5130
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
4-oxopentanoate degradation
-
-
PWY-7948
6-gingerol analog biosynthesis (engineered)
-
-
PWY-6920
acetaldehyde biosynthesis I
-
-
PWY-6333
acetate and ATP formation from acetyl-CoA II
-
-
PWY-5535
acetate and ATP formation from acetyl-CoA III
-
-
PWY-8328
acetate conversion to acetyl-CoA
-
-
PWY0-1313
acetate fermentation
-
-
acetyl CoA biosynthesis
-
-
acetylene degradation (anaerobic)
-
-
P161-PWY
adenine and adenosine salvage VI
-
-
PWY-6619
adenosine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7227
adenosine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7220
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
adlupulone and adhumulone biosynthesis
-
-
PWY-7857
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
Alanine, aspartate and glutamate metabolism
-
-
alpha-Linolenic acid metabolism
-
-
Amino sugar and nucleotide sugar metabolism
-
-
Aminoacyl-tRNA biosynthesis
-
-
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anteiso-branched-chain fatty acid biosynthesis
-
-
PWY-8173
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arachidonic acid metabolism
-
-
arachidonic acid metabolism
-
-
Arginine biosynthesis
-
-
arsenate detoxification I
-
-
PWY-8264
arsenate detoxification III
-
-
PWY-8263
arsenate reduction (respiratory)
-
-
PWY-4601
arsenic detoxification (plants)
-
-
PWY-8259
arsenic detoxification (yeast)
-
-
PWY-4621
arsonoacetate degradation
-
-
P482-PWY
Ascorbate and aldarate metabolism
-
-
aspartate and asparagine metabolism
-
-
beta-(1,4)-mannan degradation
-
-
PWY-7456
beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
-
-
PWY-7586
Bifidobacterium shunt
-
-
P124-PWY
Biosynthesis of secondary metabolites
-
-
Butanoate metabolism
-
-
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C20 prostanoid biosynthesis
-
-
PWY66-374
C4 and CAM-carbon fixation
-
-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
cannabinoid biosynthesis
-
-
PWY-5140
Caprolactam degradation
-
-
Carbon fixation in photosynthetic organisms
-
-
Carbon fixation pathways in prokaryotes
-
-
chitin biosynthesis
-
-
PWY-6981
chitin deacetylation
-
-
PWY-7118
Chloroalkane and chloroalkene degradation
-
-
chorismate metabolism
-
-
cis-geranyl-CoA degradation
-
-
PWY-6672
Citrate cycle (TCA cycle)
-
-
citric acid cycle
-
-
CMP phosphorylation
-
-
PWY-7205
colupulone and cohumulone biosynthesis
-
-
PWY-5133
cyclic electron flow
-
-
PWY-8270
Cysteine and methionine metabolism
-
-
cysteine metabolism
-
-
D-Amino acid metabolism
-
-
D-galactose degradation I (Leloir pathway)
-
-
PWY-6317
D-galactose detoxification
-
-
PWY-3821
D-lactate to cytochrome bo oxidase electron transfer
-
-
PWY0-1565
d-mannose degradation
-
-
D-mannose degradation I
-
-
MANNCAT-PWY
D-mannose degradation II
-
-
PWY3O-1743
D-sorbitol biosynthesis I
-
-
PWY-5054
D-xylose degradation to ethylene glycol (engineered)
-
-
PWY-7178
degradation of hexoses
-
-
degradation of pentoses
-
-
denitrification
-
-
detoxification of reactive carbonyls in chloroplasts
-
-
PWY-6786
dissimilatory sulfate reduction I (to hydrogen sufide))
-
-
DISSULFRED-PWY
Drug metabolism - cytochrome P450
-
-
Drug metabolism - other enzymes
-
-
dZTP biosynthesis
-
-
PWY-8289
Entner Doudoroff pathway
-
-
Entner-Doudoroff pathway I
-
-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
PWY-2221
erythritol biosynthesis I
-
-
PWY-8372
erythritol biosynthesis II
-
-
PWY-8373
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation III
-
-
PWY66-161
ethanol degradation IV
-
-
PWY66-162
ethanol fermentation
-
-
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis V (engineered)
-
-
PWY-7124
even iso-branched-chain fatty acid biosynthesis
-
-
PWY-8175
Fatty acid degradation
-
-
fatty acid salvage
-
-
PWY-7094
Fe(II) oxidation
-
-
PWY-6692
flavin biosynthesis
-
-
flavin biosynthesis I (bacteria and plants)
-
-
RIBOSYN2-PWY
flavin biosynthesis II (archaea)
-
-
PWY-6167
flavin biosynthesis III (fungi)
-
-
PWY-6168
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formaldehyde oxidation I
-
-
RUMP-PWY
formate to dimethyl sulfoxide electron transfer
-
-
PWY0-1356
formate to nitrite electron transfer
-
-
PWY0-1585
Fructose and mannose metabolism
-
-
Galactose metabolism
-
-
GDP-alpha-D-glucose biosynthesis
-
-
PWY-5661
GDP-mannose biosynthesis
-
-
PWY-5659
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucose and glucose-1-phosphate degradation
-
-
GLUCOSE1PMETAB-PWY
glucose degradation (oxidative)
-
-
DHGLUCONATE-PYR-CAT-PWY
glycerol degradation to butanol
-
-
PWY-7003
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
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-
PWY0-1561
Glycerolipid metabolism
-
-
Glycine, serine and threonine metabolism
-
-
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glycogen metabolism
-
-
glycolysis
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
Glyoxylate and dicarboxylate metabolism
-
-
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
glyphosate degradation III
-
-
PWY-7807
gossypol biosynthesis
-
-
PWY-5773
guanosine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7226
guanosine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7222
guanosine ribonucleotides de novo biosynthesis
-
-
PWY-7221
heterolactic fermentation
-
-
P122-PWY
Histidine metabolism
-
-
histidine metabolism
-
-
homocysteine and cysteine interconversion
-
-
PWY-801
hydrogen sulfide biosynthesis II (mammalian)
-
-
PWY66-426
hydrogen to dimethyl sulfoxide electron transfer
-
-
PWY0-1577
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
inosine-5'-phosphate biosynthesis I
-
-
PWY-6123
inosine-5'-phosphate biosynthesis II
-
-
PWY-6124
inosine-5'-phosphate biosynthesis III
-
-
PWY-7234
Inositol phosphate metabolism
-
-
isoleucine metabolism
-
-
itaconate degradation
-
-
PWY-5749
justicidin B biosynthesis
-
-
PWY-6824
L-ascorbate biosynthesis VIII (engineered pathway)
-
-
PWY-7165
L-asparagine biosynthesis III (tRNA-dependent)
-
-
PWY490-4
L-cysteine biosynthesis III (from L-homocysteine)
-
-
HOMOCYSDEGR-PWY
L-histidine biosynthesis
-
-
HISTSYN-PWY
L-isoleucine biosynthesis V
-
-
PWY-5108
L-isoleucine degradation I
-
-
ILEUDEG-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation I
-
-
LEU-DEG2-PWY
L-leucine degradation III
-
-
PWY-5076
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine degradation III
-
-
PWY-5079
L-threonine degradation V
-
-
PWY66-428
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation I
-
-
VALDEG-PWY
L-valine degradation II
-
-
PWY-5057
leucine metabolism
-
-
lipid metabolism
-
-
long-chain polyamine biosynthesis
-
-
PWY-8115
lupulone and humulone biosynthesis
-
-
PWY-5132
lysine metabolism
-
-
mannitol biosynthesis
-
-
PWY-3881
mannitol degradation II
-
-
PWY-3861
matairesinol biosynthesis
-
-
PWY-5466
Metabolic pathways
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methionine metabolism
-
-
methoxylated aromatic compound degradation II
-
-
PWY-8305
methylaspartate cycle
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
FERMENTATION-PWY
N-Glycan biosynthesis
-
-
NAD metabolism
-
-
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
-
-
PWY0-1567
NADH to dimethyl sulfoxide electron transfer
-
-
PWY0-1348
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
Naphthalene degradation
-
-
Neomycin, kanamycin and gentamicin biosynthesis
-
-
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction III (dissimilatory)
-
-
PWY0-1321
nitrate reduction IX (dissimilatory)
-
-
PWY0-1581
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction VIII (dissimilatory)
-
-
PWY0-1352
nitrate reduction VIIIb (dissimilatory)
-
-
PWY0-1573
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitrifier denitrification
-
-
PWY-7084
Nitrogen metabolism
-
-
nitrogen remobilization from senescing leaves
-
-
PWY-6549
Nitrotoluene degradation
-
-
nocardicin A biosynthesis
-
-
PWY-7797
non-pathway related
-
-
noradrenaline and adrenaline degradation
-
-
PWY-6342
O-Antigen nucleotide sugar biosynthesis
-
-
octane oxidation
-
-
P221-PWY
odd iso-branched-chain fatty acid biosynthesis
-
-
PWY-8174
One carbon pool by folate
-
-
oxidative decarboxylation of pyruvate
-
-
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
Pentose and glucuronate interconversions
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phenylethanol biosynthesis
-
-
PWY-5751
phosphate acquisition
-
-
PWY-6348
Photosynthesis
-
-
photosynthesis
-
-
photosynthesis light reactions
-
-
PWY-101
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7218
phytol degradation
-
-
PWY66-389
polyamine pathway
-
-
Porphyrin and chlorophyll metabolism
-
-
ppGpp metabolism
-
-
PPGPPMET-PWY
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
Propanoate metabolism
-
-
propanol degradation
-
-
protein N-glycosylation initial phase (eukaryotic)
-
-
MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
purine deoxyribonucleosides salvage
-
-
PWY-7224
Purine metabolism
-
-
purine metabolism
-
-
pyrimidine deoxyribonucleosides salvage
-
-
PWY-7199
pyrimidine deoxyribonucleotide phosphorylation
-
-
PWY-7197
pyrimidine deoxyribonucleotides biosynthesis from CTP
-
-
PWY-7210
pyrimidine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7184
pyrimidine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7187
pyrimidine deoxyribonucleotides de novo biosynthesis III
-
-
PWY-6545
pyrimidine deoxyribonucleotides de novo biosynthesis IV
-
-
PWY-7198
Pyrimidine metabolism
-
-
pyrimidine metabolism
-
-
pyruvate decarboxylation to acetyl CoA I
-
-
PYRUVDEHYD-PWY
pyruvate decarboxylation to acetyl CoA II
-
-
PWY-6970
pyruvate fermentation to acetate III
-
-
PWY-5483
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
Pyruvate metabolism
-
-
pyruvate to cytochrome bo oxidase electron transfer
-
-
PWY-7544
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
Retinol metabolism
-
-
Riboflavin metabolism
-
-
Rubisco shunt
-
-
PWY-5723
salidroside biosynthesis
-
-
PWY-6802
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
serine metabolism
-
-
serine racemization
-
-
PWY-8140
serotonin degradation
-
-
PWY-6313
serotonin metabolism
-
-
sesamin biosynthesis
-
-
PWY-5469
sporopollenin precursors biosynthesis
-
-
PWY-6733
stachyose degradation
-
-
PWY-6527
Starch and sucrose metabolism
-
-
starch biosynthesis
-
-
PWY-622
starch degradation
-
-
starch degradation II
-
-
PWY-6724
starch degradation V
-
-
PWY-6737
Streptomycin biosynthesis
-
-
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
-
PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfate reduction
-
-
sulfite oxidation II
-
-
PWY-5279
sulfite oxidation III
-
-
PWY-5278
Sulfur metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
-
-
PWY0-166
taurine biosynthesis III
-
-
PWY-8359
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
thiamine diphosphate biosynthesis I (E. coli)
-
-
PWY-6894
thiamine diphosphate biosynthesis II (Bacillus)
-
-
PWY-6893
thiamine diphosphate biosynthesis III (Staphylococcus)
-
-
PWY-6907
thiamine diphosphate biosynthesis IV (eukaryotes)
-
-
PWY-6908
thiamine diphosphate salvage II
-
-
PWY-6897
thiamine diphosphate salvage IV (yeast)
-
-
PWY-7356
Thiamine metabolism
-
-
thiamine phosphate formation from pyrithiamine and oxythiamine (yeast)
-
-
PWY-7357
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
trehalose degradation I (low osmolarity)
-
-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
-
-
PWY0-1182
trehalose degradation IV
-
-
PWY-2722
trehalose degradation V
-
-
PWY-2723
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA processing
-
-
PWY0-1479
tRNA splicing I
-
-
PWY-6689
tRNA splicing II
-
-
PWY-7803
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
urea cycle
UTP and CTP de novo biosynthesis
-
-
PWY-7176
UTP and CTP dephosphorylation I
-
-
PWY-7185
valine metabolism
-
-
valproate beta-oxidation
-
-
PWY-8182
vancomycin resistance II
-
-
PWY-6455
Various types of N-glycan biosynthesis
-
-
vitamin B1 metabolism
-
-
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
NADH-dependent ferric reductase activity increases approximately 100fold in whole-cell extracts from iron-grown cells relative to those from nitrate-grown cells
Manually annotated by BRENDA team
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NADH-dependent ferric reductase activity increases approximately 100fold in whole-cell extracts from iron-grown cells relative to those from nitrate-grown cells
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Pyrobaculum aerophilum)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA