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Information on Organism Propionibacterium freudenreichii subsp. shermanii

Synonyms:
ATCC 9614; CCUG 36819; CIP 103027; DSM 4902; LMG 16424; LMG:16424; NCTC 13653; Propionibacterium freudenreichii shermanii; Propionibacterium freudenreichii subsp. shermanii; Propionibacterium freudenreichii subsp. shermanii (van Niel 1928) Holdeman and Moore 1970; Propionibacterium shermanii; "Propionibacterium shermanii" van Niel 1928; Propionicibacterium freudenreichii subsp. shermanii;
Word Map for Organism Propionibacterium freudenreichii subsp. shermanii
TaxTree of Organism Propionibacterium freudenreichii subsp. shermanii
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Actinobacteria can be found in Brenda BRENDA pathways(phylum)
Actinomycetia can be found in Brenda BRENDA pathways(class)
Propionibacteriales can be found in Brenda (order)
Propionibacteriaceae can be found in Brenda BRENDA pathways(family)
Propionibacterium can be found in Brenda BRENDA pathways(genus)
Propionibacterium freudenreichii can be found in Brenda BRENDA pathways(species)
Propionibacterium freudenreichii subsp. shermanii can be found in Brenda BRENDA pathways(subspecies)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,2-propanediol biosynthesis from lactate (engineered)
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PWY-7541
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2-amino-3-hydroxycyclopent-2-enone biosynthesis
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PWY-7536
2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7965
3-dehydroquinate biosynthesis II (archaea)
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PWY-6160
3-hydroxypropanoate cycle
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PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3-oxoadipate degradation
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PWY-2361
4-aminobutanoate degradation V
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PWY-5022
4-hydroxymandelate degradation
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4-methylcatechol degradation (ortho cleavage)
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PWY-6185
5,6-dimethylbenzimidazole biosynthesis I (aerobic)
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PWY-5523
5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7969
5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7966
5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7967
5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7968
acetyl-CoA fermentation to butanoate
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PWY-5676
acrylate degradation I
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PWY-6373
adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7964
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I
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PWY-5509
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
aerobic toluene degradation
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Aflatoxin biosynthesis
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alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alpha-dystroglycan glycosylation
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PWY-7981
Amino sugar and nucleotide sugar metabolism
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anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
anapleurotic synthesis of oxalacetate
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Arginine and proline metabolism
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assimilatory sulfate reduction I
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SO4ASSIM-PWY
assimilatory sulfate reduction III
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PWY-6683
benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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PWY-7970
Benzoate degradation
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-
beta-alanine biosynthesis II
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PWY-3941
beta-Alanine metabolism
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Bifidobacterium shunt
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P124-PWY
Biosynthesis of 12-, 14- and 16-membered macrolides
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Biosynthesis of secondary metabolites
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biotin biosynthesis
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Biotin metabolism
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biotin-carboxyl carrier protein assembly
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PWY0-1264
Butanoate metabolism
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
C5-Branched dibasic acid metabolism
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Calvin-Benson-Bassham cycle
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CALVIN-PWY
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
cholesterol degradation to androstenedione I (cholesterol oxidase)
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PWY-6945
choline biosynthesis III
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PWY-3561
Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation in Crenarchaeota
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CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
conversion of succinate to propanoate
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PWY0-43
cremeomycin biosynthesis
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PWY-8296
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
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PWY-7854
Cysteine and methionine metabolism
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cysteine metabolism
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D-Amino acid metabolism
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D-arabinitol degradation I
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DARABITOLUTIL-PWY
d-xylose degradation
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D-xylose degradation I
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XYLCAT-PWY
degradation of sugar alcohols
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diethylphosphate degradation
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PWY-5491
dipicolinate biosynthesis
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PWY-8088
ectoine biosynthesis
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P101-PWY
Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
erythromycin D biosynthesis
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PWY-7106
ethanol degradation IV
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PWY66-162
ethanolamine utilization
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PWY0-1477
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis V (engineered)
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PWY-7124
Ether lipid metabolism
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ethylmalonyl-CoA pathway
Fatty acid biosynthesis
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fatty acid biosynthesis initiation (type I)
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PWY-5966-1
Fe(II) oxidation
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PWY-6692
flavin biosynthesis
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flavin biosynthesis I (bacteria and plants)
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RIBOSYN2-PWY
flavin biosynthesis II (archaea)
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PWY-6167
flavin biosynthesis III (fungi)
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PWY-6168
Folate biosynthesis
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folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
folate transformations III (E. coli)
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1CMET2-PWY
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
Fructose and mannose metabolism
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Galactose metabolism
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gallate degradation III (anaerobic)
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P3-PWY
GDP-alpha-D-glucose biosynthesis
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PWY-5661
gluconeogenesis
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gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glutamate and glutamine metabolism
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glycerol degradation I
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PWY-4261
glycerol degradation to butanol
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PWY-7003
glycerol-3-phosphate shuttle
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PWY-6118
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
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PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
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PWY0-1582
glycerol-3-phosphate to hydrogen peroxide electron transport
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PWY0-1591
Glycerolipid metabolism
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glycerophosphodiester degradation
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PWY-6952
Glycerophospholipid metabolism
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glycine betaine biosynthesis
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Glycine, serine and threonine metabolism
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glycogen biosynthesis III (from alpha-maltose 1-phosphate)
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PWY-7900
glycogen degradation I
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GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glycogen metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glyoxylate and dicarboxylate metabolism
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glyoxylate assimilation
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PWY-5744
glyoxylate cycle
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GLYOXYLATE-BYPASS
grixazone biosynthesis
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PWY-7153
heme metabolism
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heterolactic fermentation
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P122-PWY
homospermidine biosynthesis I
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PWY-5907
homospermidine biosynthesis II
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PWY-8149
incomplete reductive TCA cycle
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P42-PWY
Inositol phosphate metabolism
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inulin degradation
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PWY-8314
isoleucine metabolism
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jadomycin biosynthesis
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PWY-6679
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
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PWY-8294
L-cysteine biosynthesis I
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CYSTSYN-PWY
L-glutamate degradation II
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GLUTDEG-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-histidine degradation V
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PWY-5031
L-homoserine biosynthesis
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HOMOSERSYN-PWY
L-isoleucine biosynthesis III
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PWY-5103
L-lactaldehyde degradation
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-
L-lysine biosynthesis I
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DAPLYSINESYN-PWY
L-lysine biosynthesis II
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PWY-2941
L-lysine biosynthesis III
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PWY-2942
L-lysine biosynthesis VI
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PWY-5097
L-methionine biosynthesis I
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HOMOSER-METSYN-PWY
L-methionine biosynthesis III
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HSERMETANA-PWY
L-methionine biosynthesis IV
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-
PWY-7977
L-methionine salvage from L-homocysteine
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ADENOSYLHOMOCYSCAT-PWY
L-proline degradation II (reductive Stickland reaction)
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PWY-8186
lactate fermentation
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-
lactose and galactose degradation I
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LACTOSECAT-PWY
lipid A-core biosynthesis (P. gingivalis)
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PWY-8248
lipid metabolism
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Lysine biosynthesis
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macrolide antibiotic biosynthesis
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malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
Mannose type O-glycan biosynthesis
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Metabolic pathways
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metabolism of disaccharids
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Methane metabolism
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Methanobacterium thermoautotrophicum biosynthetic metabolism
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PWY-6146
methanol oxidation to formaldehyde IV
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-
PWY-5506
methionine metabolism
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-
methylaspartate cycle
methylgallate degradation
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METHYLGALLATE-DEGRADATION-PWY
methylglyoxal degradation
-
-
methylglyoxal degradation I
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-
PWY-5386
methylglyoxal degradation VIII
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PWY-5386-1
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
Monobactam biosynthesis
-
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mycolate biosynthesis
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PWYG-321
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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PWY-6397
NAD metabolism
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NAD salvage pathway II (PNC IV cycle)
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PWY-7761
NAD(P)/NADPH interconversion
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PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
Neomycin, kanamycin and gentamicin biosynthesis
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Nicotinate and nicotinamide metabolism
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nitrate reduction IX (dissimilatory)
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PWY0-1581
nitrate reduction X (dissimilatory, periplasmic)
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PWY0-1584
nitrogen remobilization from senescing leaves
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PWY-6549
nocardicin A biosynthesis
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PWY-7797
non-pathway related
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-
norspermidine biosynthesis
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PWY-6562
O-antigen building blocks biosynthesis (E. coli)
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OANTIGEN-PWY
O-Antigen nucleotide sugar biosynthesis
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One carbon pool by folate
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Other glycan degradation
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Oxidative phosphorylation
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oxidative phosphorylation
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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partial TCA cycle (obligate autotrophs)
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PWY-5913
Penicillin and cephalosporin biosynthesis
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-
Pentose and glucuronate interconversions
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Pentose phosphate pathway
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pentose phosphate pathway
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pentose phosphate pathway (non-oxidative branch) II
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PWY-8178
Phenylalanine, tyrosine and tryptophan biosynthesis
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phosphatidate biosynthesis (yeast)
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PWY-7411
phosphatidate metabolism, as a signaling molecule
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PWY-7039
phospholipases
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LIPASYN-PWY
phosphopantothenate biosynthesis I
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-
PANTO-PWY
photosynthesis
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-
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
platensimycin biosynthesis
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-
PWY-8179
poly(3-O-beta-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis
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PWY-7819
poly(glycerol phosphate) wall teichoic acid biosynthesis
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TEICHOICACID-PWY
poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis)
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PWY-7815
poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus)
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PWY-7816
polyphosphate metabolism
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PWY-8138
Porphyrin and chlorophyll metabolism
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-
proline metabolism
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propanoate fermentation to 2-methylbutanoate
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PWY-5109
Propanoate metabolism
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-
propanol degradation
-
-
propanoyl CoA degradation I
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PROPIONMET-PWY
propanoyl-CoA degradation II
-
-
PWY-7574
propionate fermentation
-
-
protocatechuate degradation I (meta-cleavage pathway)
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P184-PWY
Purine metabolism
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-
purine metabolism
-
-
Pyrimidine metabolism
-
-
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to propanoate I
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-
P108-PWY
pyruvate fermentation to propanoate II (acrylate pathway)
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PWY-5494
Pyruvate metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
reductive TCA cycle I
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-
P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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-
PWY-6857
Riboflavin metabolism
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Rubisco shunt
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PWY-5723
sedoheptulose bisphosphate bypass
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-
PWY0-1517
seleno-amino acid biosynthesis (plants)
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PWY-6936
Selenocompound metabolism
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spermidine biosynthesis II
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PWY-6559
Sphingolipid metabolism
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Starch and sucrose metabolism
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starch degradation
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Steroid biosynthesis
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Steroid degradation
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sterol:steryl ester interconversion (yeast)
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PWY-7424
Streptomycin biosynthesis
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Styrene degradation
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succinate fermentation to butanoate
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PWY-5677
sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sucrose biosynthesis II
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PWY-7238
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
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PWY66-373
sulfate reduction
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sulfopterin metabolism
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Sulfur metabolism
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superoxide radicals degradation
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DETOX1-PWY
superpathway of adenosylcobalamin salvage from cobinamide I
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COBALSYN-PWY
superpathway of adenosylcobalamin salvage from cobinamide II
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PWY-6269
superpathway of glucose and xylose degradation
-
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PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
superpathway of L-aspartate and L-asparagine biosynthesis
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ASPASN-PWY
superpathway of photosynthetic hydrogen production
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PWY-7731
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
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PWY-7328
syringate degradation
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-
PWY-6339
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
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TCA-1
teichoic acid biosynthesis
-
-
tetrapyrrole biosynthesis I (from glutamate)
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-
PWY-5188
tetrapyrrole biosynthesis II (from glycine)
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PWY-5189
Thiamine metabolism
-
-
threonine metabolism
-
-
trehalose biosynthesis I
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-
TRESYN-PWY
trehalose biosynthesis II
-
-
PWY-881
trehalose biosynthesis III
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-
TREHALOSESYN-PWY
trehalose degradation I (low osmolarity)
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-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
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-
PWY0-1182
trehalose degradation IV
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PWY-2722
trehalose degradation V
-
-
PWY-2723
triacylglycerol degradation
-
-
LIPAS-PWY
Tropane, piperidine and pyridine alkaloid biosynthesis
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-
Tryptophan metabolism
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-
tryptophan metabolism
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-
type IV lipoteichoic acid biosynthesis (S. pneumoniae)
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-
PWY-7818
Ubiquinone and other terpenoid-quinone biosynthesis
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-
UDP-alpha-D-galactofuranose biosynthesis
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-
PWY-7622
UDP-N-acetyl-D-galactosamine biosynthesis II
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-
PWY-5514
UDP-N-acetyl-D-glucosamine biosynthesis II
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-
UDPNACETYLGALSYN-PWY
Valine, leucine and isoleucine degradation
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-
vitamin B12 metabolism
-
-
vitamin K-epoxide cycle
xylitol degradation I
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-
LARABITOLUTIL-PWY
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
activity at different phases of growth with lactate
Manually annotated by BRENDA team
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Propionibacterium freudenreichii subsp. shermanii)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA