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Information on Organism Oryza sativa Japonica Group

Japanese rice; Japonica rice; Oryza sativa (japonica cultivar-group); Oryza sativa Japonica Group; Oryza sativa subsp. japonica; Oryza sativa (japonica culticar-group); Oryza sativa japonica; Oryza sativa ssp. japonica; Oryza sativa aromatic cultivar-group;

Word Map for Organism Oryza sativa Japonica Group

TaxTree of Organism Oryza sativa Japonica Group

Condensed Tree View

cellular organisms (cellular root)

can be found in Brenda

BRENDA pathways

(domain)

Viridiplantae can be found in Brenda

can be found in Brenda

BRENDA pathways

(kingdom)

Streptophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Streptophytina can be found in Brenda

can be found in Brenda

(subphylum)

Embryophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Tracheophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Euphyllophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Spermatophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Magnoliopsida can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Mesangiospermae can be found in Brenda

can be found in Brenda

(clade)

Liliopsida can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Petrosaviidae can be found in Brenda

can be found in Brenda

(subclass)

commelinids can be found in Brenda

can be found in Brenda

(clade)

can be found in Brenda

BRENDA pathways

(order)

can be found in Brenda

BRENDA pathways

(family)

can be found in Brenda

(clade)

Oryzoideae can be found in Brenda

can be found in Brenda

BRENDA pathways

(subfamily)

can be found in Brenda

BRENDA pathways

(tribe)

can be found in Brenda

(subtribe)

can be found in Brenda

BRENDA pathways

(genus)

Oryza sativa can be found in Brenda

can be found in Brenda

BRENDA pathways

(species)

Oryza sativa Japonica Group

can be found in Brenda

BRENDA pathways

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(5R)-carbapenem carboxylate biosynthesis

(7Z,10Z,13Z)-hexadecatrienoate biosynthesis

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-

PWY-7590

(9Z)-tricosene biosynthesis

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-

PWY-7035

(S)-propane-1,2-diol degradation

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-

PWY-7013

(S)-reticuline biosynthesis

(S)-reticuline biosynthesis

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-

(S)-reticuline biosynthesis I

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-

PWY-3581

(S)-reticuline biosynthesis II

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-

PWY-6133

1,3-propanediol biosynthesis (engineered)

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-

PWY-7385

1,5-anhydrofructose degradation

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-

PWY-6992

1-butanol autotrophic biosynthesis (engineered)

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-

PWY-6886

1-methylpyrrolinium biosynthesis

-

-

PWY-5315

1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3)

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PWY-6361

1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)

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PWY-6362

1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)

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PWY-4661

1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)

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PWY-6372

1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)

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-

PWY-6554

2'-deoxymugineic acid phytosiderophore biosynthesis

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-

PWY-5912

2-arachidonoylglycerol biosynthesis

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-

PWY-8052

2-oxoglutarate decarboxylation to succinyl-CoA

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PWY-5084

24-epi-campesterol, fucosterol, and clionasterol biosynthesis (diatoms)

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-

PWY-8238

3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)

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-

CHLOROPHYLL-SYN

3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)

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-

PWY-5531

3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)

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PWY-7159

3-(4-hydroxyphenyl)pyruvate biosynthesis

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PWY-5886

3-dehydroquinate biosynthesis II (archaea)

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-

PWY-6160

3-hydroxypropanoate cycle

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-

PWY-5743

3-hydroxypropanoate/4-hydroxybutanate cycle

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-

PWY-5789

3-methyl-branched fatty acid alpha-oxidation

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PWY66-387

3-methylbutanol biosynthesis (engineered)

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-

PWY-6871

3-phosphoinositide degradation

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-

PWY-6368

4-aminobutanoate degradation V

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-

PWY-5022

4-coumarate degradation (aerobic)

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-

PWY-8002

4-coumarate degradation (anaerobic)

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-

PWY-7046

4-hydroxy-2-nonenal detoxification

-

-

PWY-7112

4-hydroxybenzoate biosynthesis I (eukaryotes)

-

-

PWY-5754

4-hydroxybenzoate biosynthesis III (plants)

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-

PWY-6435

5-deoxystrigol biosynthesis

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-

PWY-7101

6-gingerol analog biosynthesis (engineered)

-

-

PWY-6920

9-lipoxygenase and 9-allene oxide synthase pathway

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-

PWY-5407

9-lipoxygenase and 9-hydroperoxide lyase pathway

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-

PWY-5408

abscisic acid biosynthesis

-

-

PWY-695

acetaldehyde biosynthesis I

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PWY-6333

acetate fermentation

acetate fermentation

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acetoin degradation

acetoin degradation

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-

acetone degradation I (to methylglyoxal)

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PWY-5451

acetone degradation III (to propane-1,2-diol)

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PWY-7466

acetyl CoA biosynthesis

acetyl CoA biosynthesis

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acetyl-CoA biosynthesis from citrate

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PWY-5172

acetylene degradation (anaerobic)

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-

P161-PWY

adenosine deoxyribonucleotides de novo biosynthesis I

-

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PWY-7227

adenosine deoxyribonucleotides de novo biosynthesis II

-

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PWY-7220

adenosine nucleotides degradation I

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PWY-6596

adenosine ribonucleotides de novo biosynthesis

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PWY-7219

alanine metabolism

alanine metabolism

-

-

Alanine, aspartate and glutamate metabolism

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-

alkane oxidation

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-

PWY-2724

allantoin degradation

allantoin degradation

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-

allantoin degradation to glyoxylate II

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PWY-5692

allantoin degradation to ureidoglycolate I (urea producing)

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PWY-5697

allantoin degradation to ureidoglycolate II (ammonia producing)

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PWY-5698

alpha-carotene biosynthesis

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PWY-5946

alpha-linolenate biosynthesis I (plants and red algae)

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PWY-5997

alpha-linolenate metabolites biosynthesis

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-

PWY-8398

alpha-Linolenic acid metabolism

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-

Amaryllidacea alkaloids biosynthesis

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-

PWY-7826

Amino sugar and nucleotide sugar metabolism

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-

Aminoacyl-tRNA biosynthesis

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-

Aminobenzoate degradation

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-

ammonia assimilation cycle I

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-

PWY-6963

ammonia assimilation cycle II

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-

PWY-6964

ammonia assimilation cycle III

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AMMASSIM-PWY

ammonia oxidation II (anaerobic)

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P303-PWY

anaerobic energy metabolism (invertebrates, cytosol)

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PWY-7383

anandamide biosynthesis I

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-

PWY-8051

anandamide biosynthesis II

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-

PWY-8053

apigenin glycosides biosynthesis

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PWY-6010

arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)

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PWY-7601

arachidonate biosynthesis V (8-detaturase, mammals)

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PWY-7725

arachidonate metabolites biosynthesis

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PWY-8397

Arachidonic acid metabolism

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arachidonic acid metabolism

arachidonic acid metabolism

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-

Arg/N-end rule pathway (eukaryotic)

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PWY-7799

Arginine and proline metabolism

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-

Arginine biosynthesis

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arginine metabolism

arginine metabolism

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-

aromatic biogenic amine degradation (bacteria)

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PWY-7431

aromatic polyketides biosynthesis

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PWY-6316

arsenate detoxification I

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PWY-8264

Ascorbate and aldarate metabolism

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ascorbate glutathione cycle

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PWY-2261

ascorbate metabolism

ascorbate metabolism

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ascorbate recycling (cytosolic)

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PWY-6370

aspartate and asparagine metabolism

aspartate and asparagine metabolism

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aspirin triggered resolvin D biosynthesis

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PWY66-395

aspirin triggered resolvin E biosynthesis

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PWY66-394

ATP biosynthesis

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PWY-7980

Atrazine degradation

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atrazine degradation I (aerobic)

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P141-PWY

atrazine degradation III

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PWY-5731

atromentin biosynthesis

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PWY-7518

avenanthramide biosynthesis

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PWY-8157

baicalein degradation (hydrogen peroxide detoxification)

-

-

PWY-7214

benzoate biosynthesis II (CoA-independent, non-beta-oxidative)

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PWY-6444

beta-(1,4)-mannan degradation

-

-

PWY-7456

beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation

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PWY-7586

beta-alanine biosynthesis I

-

-

PWY-3981

beta-alanine biosynthesis IV

-

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PWY-5760

beta-Alanine metabolism

-

-

beta-carboline biosynthesis

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-

PWY-5877

beta-carotene biosynthesis

-

-

PWY-5943

beta-D-glucuronide and D-glucuronate degradation

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PWY-7247

Betalain biosynthesis

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betanidin degradation

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PWY-5461

betaxanthin biosynthesis

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PWY-5426

betaxanthin biosynthesis (via dopamine)

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PWY-5403

Bifidobacterium shunt

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-

P124-PWY

Biosynthesis of enediyne antibiotics

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-

Biosynthesis of secondary metabolites

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-

Biosynthesis of unsaturated fatty acids

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-

Bisphenol degradation

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Brassinosteroid biosynthesis

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-

bupropion degradation

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PWY66-241

Butanoate metabolism

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-

butanol and isobutanol biosynthesis (engineered)

-

-

PWY-7396

C4 and CAM-carbon fixation

C4 and CAM-carbon fixation

-

-

C4 photosynthetic carbon assimilation cycle, NAD-ME type

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-

PWY-7115

C4 photosynthetic carbon assimilation cycle, NADP-ME type

-

-

PWY-241

C4 photosynthetic carbon assimilation cycle, PEPCK type

-

-

PWY-7117

C5-Branched dibasic acid metabolism

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-

Caffeine metabolism

-

-

caffeoylglucarate biosynthesis

-

-

PWY-6673

Calvin-Benson-Bassham cycle

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-

CALVIN-PWY

camalexin biosynthesis

-

-

CAMALEXIN-SYN

capsiconiate biosynthesis

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-

PWY-6027

Carbon fixation in photosynthetic organisms

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-

Carbon fixation pathways in prokaryotes

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-

cardenolide glucosides biosynthesis

-

-

PWY-6036

Carotenoid biosynthesis

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carotenoid biosynthesis

carotenoid biosynthesis

-

-

catecholamine biosynthesis

cellulose biosynthesis

-

-

PWY-1001

ceramide and sphingolipid recycling and degradation (yeast)

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-

PWY-7119

ceramide degradation by alpha-oxidation

-

-

PWY66-388

chitin degradation I (archaea)

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-

PWY-6855

chitin degradation II (Vibrio)

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-

PWY-6902

chitin degradation III (Serratia)

-

-

PWY-7822

Chloroalkane and chloroalkene degradation

-

-

chlorobactene biosynthesis

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-

PWY-7939

chlorogenic acid biosynthesis I

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-

PWY-6039

chlorogenic acid biosynthesis II

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PWY-6040

chlorophyll a degradation I

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PWY-5098

chlorophyll a degradation II

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PWY-6927

chlorophyll a degradation III

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-

PWY-7164

chlorophyll metabolism

chlorophyll metabolism

-

-

cholesterol biosynthesis

cholesterol biosynthesis

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-

cholesterol biosynthesis (algae, late side-chain reductase)

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PWY-8191

cholesterol biosynthesis (diatoms)

-

-

PWY-8239

cholesterol biosynthesis (plants, early side-chain reductase)

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PWY18C3-1

cholesterol biosynthesis I

-

-

PWY66-341

cholesterol biosynthesis II (via 24,25-dihydrolanosterol)

-

-

PWY66-3

cholesterol biosynthesis III (via desmosterol)

-

-

PWY66-4

choline degradation I

-

-

CHOLINE-BETAINE-ANA-PWY

choline degradation IV

-

-

PWY-7494

chrysoeriol biosynthesis

-

-

PWY-6232

cinnamoyl-CoA biosynthesis

-

-

PWY-6457

Citrate cycle (TCA cycle)

-

-

citric acid cycle

citric acid cycle

-

-

CMP phosphorylation

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-

PWY-7205

CO2 fixation into oxaloacetate (anaplerotic)

-

-

PWYQT-4429

colanic acid building blocks biosynthesis

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-

COLANSYN-PWY

complex N-linked glycan biosynthesis (plants)

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PWY-7920

coniferin metabolism

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-

PWY-116

coumarins biosynthesis (engineered)

-

-

PWY-7398

creatine phosphate biosynthesis

-

-

PWY-6158

cremeomycin biosynthesis

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-

PWY-8296

curcuminoid biosynthesis

cyanate degradation

Cyanoamino acid metabolism

-

-

cyclic electron flow

-

-

PWY-8270

Cysteine and methionine metabolism

-

-

cysteine metabolism

cysteine metabolism

-

-

cytokinin-O-glucosides biosynthesis

-

-

PWY-2902

cytosolic NADPH production (yeast)

-

-

PWY-7268

D-Amino acid metabolism

-

-

D-galactose degradation I (Leloir pathway)

-

-

PWY-6317

D-galactose detoxification

-

-

PWY-3821

d-mannose degradation

d-mannose degradation

-

-

D-mannose degradation I

-

-

MANNCAT-PWY

D-mannose degradation II

-

-

PWY3O-1743

D-myo-inositol (1,4,5)-trisphosphate biosynthesis

-

-

PWY-6351

D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis

-

-

PWY-6366

D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis

-

-

PWY-6365

D-myo-inositol-5-phosphate metabolism

-

-

PWY-6367

degradation of aromatic, nitrogen containing compounds

degradation of aromatic, nitrogen containing compounds

-

-

degradation of hexoses

degradation of hexoses

-

-

degradation of pentoses

degradation of pentoses

-

-

degradation of sugar acids

degradation of sugar acids

-

-

denitrification

denitrification

-

-

di-homo-gamma-linolenate metabolites biosynthesis

-

-

PWY-8396

dimethylsulfoniopropanoate biosynthesis I (Wollastonia)

-

-

PWY-6054

dimethylsulfoniopropanoate biosynthesis II (Spartina)

-

-

PWY-6055

dipicolinate biosynthesis

-

-

PWY-8088

diterpene phytoalexins precursors biosynthesis

Diterpenoid biosynthesis

-

-

divinyl ether biosynthesis I

-

-

PWY-5406

divinyl ether biosynthesis II

-

-

PWY-5409

docosahexaenoate metabolites biosynthesis

-

-

PWY-8400

dolabralexins biosynthesis

-

-

PWY-7994

dopamine degradation

-

-

PWY6666-2

drosopterin and aurodrosopterin biosynthesis

-

-

PWY-7442

Drug metabolism - cytochrome P450

-

-

Drug metabolism - other enzymes

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-

dTMP de novo biosynthesis (mitochondrial)

-

-

PWY66-385

dZTP biosynthesis

-

-

PWY-8289

echinatin biosynthesis

-

-

PWY-6325

ectoine biosynthesis

-

-

P101-PWY

ent-kaurene biosynthesis I

-

-

PWY-5032

Entner Doudoroff pathway

Entner Doudoroff pathway

-

-

Entner-Doudoroff pathway I

-

-

PWY-8004

Entner-Doudoroff pathway III (semi-phosphorylative)

-

-

PWY-2221

ephedrine biosynthesis

-

-

PWY-5883

ergosterol biosynthesis II

-

-

PWY-7154

ethanol degradation I

-

-

ETOH-ACETYLCOA-ANA-PWY

ethanol degradation II

-

-

PWY66-21

ethanol degradation III

-

-

PWY66-161

ethanol degradation IV

-

-

PWY66-162

ethanol fermentation

ethanol fermentation

-

-

ethanolamine utilization

-

-

PWY0-1477

ethene biosynthesis I (plants)

-

-

ETHYL-PWY

ethene biosynthesis III (microbes)

-

-

PWY-6854

ethene biosynthesis IV (engineered)

-

-

PWY-7126

ethene biosynthesis V (engineered)

-

-

PWY-7124

Ether lipid metabolism

-

-

extended VTC2 cycle

-

-

PWY4FS-13

fatty acid alpha-oxidation I (plants)

-

-

PWY-2501

Fatty acid degradation

-

-

Fatty acid elongation

-

-

ferulate and sinapate biosynthesis

-

-

PWY-5168

Flavone and flavonol biosynthesis

-

-

flavonoid biosynthesis

-

-

PWY1F-FLAVSYN

Flavonoid biosynthesis

-

-

flavonoid biosynthesis

flavonoid biosynthesis

-

-

flavonoid biosynthesis (in equisetum)

-

-

PWY-6787

flavonoid di-C-glucosylation

-

-

PWY-7897

flavonol biosynthesis

-

-

PWY-3101

flexixanthin biosynthesis

-

-

PWY-7947

Folate biosynthesis

-

-

folate polyglutamylation

folate transformations I

-

-

PWY-2201

folate transformations II (plants)

-

-

PWY-3841

folate transformations III (E. coli)

-

-

1CMET2-PWY

formaldehyde assimilation I (serine pathway)

-

-

PWY-1622

formaldehyde assimilation II (assimilatory RuMP Cycle)

-

-

PWY-1861

formaldehyde assimilation III (dihydroxyacetone cycle)

-

-

P185-PWY

formaldehyde oxidation

formaldehyde oxidation

-

-

formaldehyde oxidation II (glutathione-dependent)

-

-

PWY-1801

free phenylpropanoid acid biosynthesis

-

-

PWY-2181

Fructose and mannose metabolism

-

-

GABA shunt I

-

-

GLUDEG-I-PWY

GABA shunt II

-

-

PWY-8346

galactolipid biosynthesis I

-

-

PWY-401

Galactose metabolism

-

-

GDP-alpha-D-glucose biosynthesis

-

-

PWY-5661

GDP-L-galactose biosynthesis

-

-

PWY-5115

GDP-mannose biosynthesis

-

-

PWY-5659

gibberellin biosynthesis III (early C-13 hydroxylation)

-

-

PWY-5035

gibberellin inactivation I (2beta-hydroxylation)

-

-

PWY-102

ginsenoside metabolism

ginsenoside metabolism

-

-

ginsenosides biosynthesis

-

-

PWY-5672

gliotoxin biosynthesis

-

-

PWY-7533

gluconeogenesis

gluconeogenesis

-

-

gluconeogenesis I

-

-

GLUCONEO-PWY

gluconeogenesis II (Methanobacterium thermoautotrophicum)

-

-

PWY-6142

gluconeogenesis III

-

-

PWY66-399

glucose and glucose-1-phosphate degradation

-

-

GLUCOSE1PMETAB-PWY

glucosylglycerol biosynthesis

-

-

PWY-7902

glutamate and glutamine metabolism

glutamate and glutamine metabolism

-

-

Glutathione metabolism

-

-

glutathione metabolism

glutathione metabolism

-

-

glutathione-mediated detoxification

glutathione-mediated detoxification

-

-

glutathione-mediated detoxification I

-

-

PWY-4061

glutathione-mediated detoxification II

-

-

PWY-6842

glutathione-peroxide redox reactions

-

-

PWY-4081

glycerol degradation to butanol

-

-

PWY-7003

Glycerolipid metabolism

-

-

Glycerophospholipid metabolism

-

-

glycine betaine biosynthesis

glycine betaine biosynthesis

-

-

glycine betaine biosynthesis I (Gram-negative bacteria)

-

-

BETSYN-PWY

glycine betaine biosynthesis II (Gram-positive bacteria)

-

-

PWY-3722

glycine betaine biosynthesis III (plants)

-

-

PWY1F-353

glycine betaine degradation I

-

-

PWY-3661

glycine betaine degradation II (mammalian)

-

-

PWY-3661-1

glycine betaine degradation III

-

-

PWY-8325

glycine biosynthesis I

-

-

GLYSYN-PWY

glycine biosynthesis II

-

-

GLYCINE-SYN2-PWY

glycine cleavage

-

-

GLYCLEAV-PWY

glycine metabolism

glycine metabolism

-

-

Glycine, serine and threonine metabolism

-

-

glycogen biosynthesis

glycogen biosynthesis

-

-

glycogen biosynthesis I (from ADP-D-Glucose)

-

-

GLYCOGENSYNTH-PWY

glycogen biosynthesis II (from UDP-D-Glucose)

-

-

PWY-5067

glycogen biosynthesis III (from alpha-maltose 1-phosphate)

-

-

PWY-7900

glycogen degradation I

-

-

GLYCOCAT-PWY

glycogen degradation II

-

-

PWY-5941

glycogen metabolism

glycogen metabolism

-

-

glycolate and glyoxylate degradation

glycolate and glyoxylate degradation

-

-

glycolipid desaturation

-

-

PWY-782

glycolysis

-

-

Glycolysis / Gluconeogenesis

-

-

glycolysis I (from glucose 6-phosphate)

-

-

GLYCOLYSIS

glycolysis II (from fructose 6-phosphate)

-

-

PWY-5484

glycolysis III (from glucose)

-

-

ANAGLYCOLYSIS-PWY

glycolysis IV

-

-

PWY-1042

glycolysis V (Pyrococcus)

-

-

P341-PWY

Glycosaminoglycan degradation

-

-

Glycosphingolipid biosynthesis - ganglio series

-

-

Glyoxylate and dicarboxylate metabolism

-

-

glyoxylate assimilation

-

-

PWY-5744

grixazone biosynthesis

-

-

PWY-7153

guanine and guanosine salvage II

-

-

PWY-6599

guanosine deoxyribonucleotides de novo biosynthesis I

-

-

PWY-7226

guanosine deoxyribonucleotides de novo biosynthesis II

-

-

PWY-7222

guanosine nucleotides degradation I

-

-

PWY-6607

guanosine nucleotides degradation II

-

-

PWY-6606

guanosine nucleotides degradation III

-

-

PWY-6608

guanosine ribonucleotides de novo biosynthesis

-

-

PWY-7221

heme b biosynthesis I (aerobic)

-

-

HEME-BIOSYNTHESIS-II

heme b biosynthesis II (oxygen-independent)

-

-

HEMESYN2-PWY

heme b biosynthesis V (aerobic)

-

-

HEME-BIOSYNTHESIS-II-1

heme degradation I

-

-

PWY-5874

heme degradation II

-

-

PWY-7845

heme metabolism

heme metabolism

-

-

heterolactic fermentation

-

-

P122-PWY

histamine degradation

-

-

PWY-6181

Histidine metabolism

-

-

histidine metabolism

histidine metabolism

-

-

hordatine biosynthesis

-

-

PWY-6448

hydroxycinnamic acid serotonin amides biosynthesis

-

-

PWY-5473

hydroxycinnamic acid tyramine amides biosynthesis

-

-

PWY-5474

hydroxylated fatty acid biosynthesis (plants)

-

-

PWY-6433

hypotaurine degradation

-

-

PWY-7387

icosapentaenoate biosynthesis III (8-desaturase, mammals)

-

-

PWY-7724

icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)

-

-

PWY-7602

icosapentaenoate biosynthesis VI (fungi)

-

-

PWY-6940

icosapentaenoate metabolites biosynthesis

-

-

PWY-8399

indole glucosinolate activation (intact plant cell)

-

-

PWYQT-4477

indole-3-acetate biosynthesis I

-

-

PWYDQC-4

indole-3-acetate biosynthesis II

-

-

PWY-581

indole-3-acetate biosynthesis VI (bacteria)

-

-

TRPIAACAT-PWY

indole-3-acetate inactivation IX

-

-

PWY-1741

indolmycin biosynthesis

-

-

PWY-7770

Inositol phosphate metabolism

-

-

Insect hormone biosynthesis

-

-

inulin degradation

-

-

PWY-8314

isoflavonoid biosynthesis I

-

-

PWY-2002

isoleucine metabolism

isoleucine metabolism

-

-

isopenicillin N biosynthesis

-

-

PWY-5629

isoprenoid biosynthesis

isoprenoid biosynthesis

-

-

Isoquinoline alkaloid biosynthesis

-

-

isorenieratene biosynthesis I (actinobacteria)

-

-

PWY-7938

jasmonic acid biosynthesis

-

-

PWY-735

juniperonate biosynthesis

-

-

PWY-7619

justicidin B biosynthesis

-

-

PWY-6824

kauralexin biosynthesis

-

-

PWY-6887

L-alanine biosynthesis II

-

-

ALANINE-SYN2-PWY

L-alanine degradation II (to D-lactate)

-

-

ALACAT2-PWY

L-alanine degradation III

-

-

ALANINE-DEG3-PWY

L-alanine degradation V (oxidative Stickland reaction)

-

-

PWY-8189

L-alanine degradation VI (reductive Stickland reaction)

-

-

PWY-8188

L-arginine degradation I (arginase pathway)

-

-

ARGASEDEG-PWY

L-arginine degradation II (AST pathway)

-

-

AST-PWY

L-arginine degradation VI (arginase 2 pathway)

-

-

ARG-PRO-PWY

L-arginine degradation XIII (reductive Stickland reaction)

-

-

PWY-8187

L-ascorbate biosynthesis I (plants, L-galactose pathway)

-

-

PWY-882

L-ascorbate biosynthesis II (plants, L-gulose pathway)

-

-

PWY4FS-11

L-ascorbate biosynthesis VII (plants, D-galacturonate pathway)

-

-

PWY-8143

L-ascorbate degradation II (bacterial, aerobic)

-

-

PWY-6961

L-ascorbate degradation III

-

-

PWY-6960

L-asparagine biosynthesis I

-

-

ASPARAGINE-BIOSYNTHESIS

L-aspartate degradation II (aerobic)

-

-

PWY-8291

L-aspartate degradation III (anaerobic)

-

-

PWY-8294

L-citrulline biosynthesis

-

-

CITRULBIO-PWY

L-cysteine biosynthesis I

-

-

CYSTSYN-PWY

L-dopa degradation II (bacterial)

-

-

PWY-8110

L-glutamate biosynthesis IV

-

-

GLUGLNSYN-PWY

L-glutamate biosynthesis V

-

-

PWY-4341

L-glutamate degradation I

-

-

GLUTAMATE-DEG1-PWY

L-glutamate degradation IX (via 4-aminobutanoate)

-

-

PWY0-1305

L-glutamate degradation V (via hydroxyglutarate)

-

-

P162-PWY

L-glutamate degradation XI (reductive Stickland reaction)

-

-

PWY-8190

L-glutamine biosynthesis I

-

-

GLNSYN-PWY

L-glutamine degradation II

-

-

GLUTAMINEFUM-PWY

L-homoserine biosynthesis

-

-

HOMOSERSYN-PWY

L-isoleucine biosynthesis I (from threonine)

-

-

ILEUSYN-PWY

L-isoleucine biosynthesis II

-

-

PWY-5101

L-isoleucine biosynthesis III

-

-

PWY-5103

L-isoleucine biosynthesis IV

-

-

PWY-5104

L-isoleucine degradation II

-

-

PWY-5078

L-leucine biosynthesis

-

-

LEUSYN-PWY

L-leucine degradation I

-

-

LEU-DEG2-PWY

L-leucine degradation III

-

-

PWY-5076

L-lysine biosynthesis I

-

-

DAPLYSINESYN-PWY

L-lysine biosynthesis II

-

-

PWY-2941

L-lysine biosynthesis III

-

-

PWY-2942

L-lysine biosynthesis VI

-

-

PWY-5097

L-lysine degradation I

-

-

PWY0-461

L-lysine degradation X

-

-

PWY-6328

L-methionine biosynthesis IV

-

-

PWY-7977

L-methionine degradation III

-

-

PWY-5082

L-Ndelta-acetylornithine biosynthesis

-

-

PWY-6922

L-nicotianamine biosynthesis

-

-

PWY-5957

L-ornithine biosynthesis II

-

-

ARGININE-SYN4-PWY

L-phenylalanine biosynthesis I

-

-

PHESYN

L-phenylalanine degradation II (anaerobic)

-

-

ANAPHENOXI-PWY

L-phenylalanine degradation III

-

-

PWY-5079

L-phenylalanine degradation IV (mammalian, via side chain)

-

-

PWY-6318

L-phenylalanine degradation VI (reductive Stickland reaction)

-

-

PWY-8014

L-proline biosynthesis III (from L-ornithine)

-

-

PWY-3341

L-proline degradation I

-

-

PROUT-PWY

L-serine biosynthesis II

-

-

PWY-8011

L-tryptophan degradation IV (via indole-3-lactate)

-

-

TRPKYNCAT-PWY

L-tryptophan degradation V (side chain pathway)

-

-

PWY-3162

L-tryptophan degradation VI (via tryptamine)

-

-

PWY-3181

L-tryptophan degradation VIII (to tryptophol)

-

-

PWY-5081

L-tryptophan degradation X (mammalian, via tryptamine)

-

-

PWY-6307

L-tryptophan degradation XIII (reductive Stickland reaction)

-

-

PWY-8017

L-tyrosine biosynthesis I

-

-

TYRSYN

L-tyrosine degradation I

-

-

TYRFUMCAT-PWY

L-tyrosine degradation II

-

-

PWY-5151

L-tyrosine degradation III

-

-

PWY3O-4108

L-tyrosine degradation IV (to 4-methylphenol)

-

-

PWY-7514

L-tyrosine degradation V (reductive Stickland reaction)

-

-

PWY-8016

L-valine biosynthesis

-

-

VALSYN-PWY

L-valine degradation II

-

-

PWY-5057

lanosterol biosynthesis

-

-

PWY-6132

leucine metabolism

leucine metabolism

-

-

leucodelphinidin biosynthesis

-

-

PWY-5152

leucopelargonidin and leucocyanidin biosynthesis

-

-

PWY1F-823

Limonene and pinene degradation

-

-

limonene degradation IV (anaerobic)

-

-

PWY-8029

linoleate metabolites biosynthesis

-

-

PWY-8395

Linoleic acid metabolism

-

-

lipid A biosynthesis

lipid A biosynthesis

-

-

lipid A-core biosynthesis (E. coli K-12)

-

-

LIPA-CORESYN-PWY

lipid metabolism

lipid metabolism

-

-

lipoate biosynthesis

lipoate biosynthesis

-

-

lipoate biosynthesis and incorporation II

-

-

PWY0-1275

Lipoic acid metabolism

-

-

lutein biosynthesis

-

-

PWY-5947

luteolin biosynthesis

-

-

PWY-5060

luteolin glycosides biosynthesis

-

-

PWY-6239

luteolin triglucuronide degradation

-

-

PWY-7445

lychnose and isolychnose biosynthesis

-

-

PWY-6524

Lysine biosynthesis

-

-

Lysine degradation

-

-

mannitol biosynthesis

-

-

PWY-3881

mannitol degradation II

-

-

PWY-3861

maresin biosynthesis

-

-

PWY-8356

matairesinol biosynthesis

-

-

PWY-5466

melatonin degradation I

-

-

PWY-6398

Metabolic pathways

-

-

metabolism of disaccharids

metabolism of disaccharids

-

-

Metabolism of xenobiotics by cytochrome P450

-

-

Methane metabolism

-

-

Methanobacterium thermoautotrophicum biosynthetic metabolism

-

-

PWY-6146

methanofuran biosynthesis

-

-

PWY-5254

methanol oxidation to formaldehyde IV

-

-

PWY-5506

methionine metabolism

methionine metabolism

-

-

methyl indole-3-acetate interconversion

-

-

PWY-6303

methylaspartate cycle

methylerythritol phosphate pathway I

-

-

NONMEVIPP-PWY

methylerythritol phosphate pathway II

-

-

PWY-7560

methylglyoxal degradation

methylglyoxal degradation

-

-

methylglyoxal degradation I

-

-

PWY-5386

methylglyoxal degradation VIII

-

-

PWY-5386-1

methylquercetin biosynthesis

-

-

PWY-6064

methylsalicylate degradation

-

-

PWY18C3-24

Microbial metabolism in diverse environments

-

-

mitochondrial NADPH production (yeast)

-

-

PWY-7269

mixed acid fermentation

-

-

FERMENTATION-PWY

molybdenum cofactor biosynthesis

-

-

PWY-8171

momilactone A biosynthesis

-

-

PWY-7477

Monobactam biosynthesis

-

-

mRNA capping I

-

-

PWY-7375

mycolate biosynthesis

-

-

PWYG-321

mycolyl-arabinogalactan-peptidoglycan complex biosynthesis

-

-

PWY-6397

myxol-2' fucoside biosynthesis

-

-

PWY-6279

NAD metabolism

-

-

NAD phosphorylation and dephosphorylation

-

-

NADPHOS-DEPHOS-PWY

NAD phosphorylation and transhydrogenation

-

-

NADPHOS-DEPHOS-PWY-1

NAD salvage (plants)

-

-

PWY-5381

NAD salvage pathway I (PNC VI cycle)

-

-

PYRIDNUCSAL-PWY

NAD salvage pathway V (PNC V cycle)

-

-

PWY3O-4107

NAD(P)/NADPH interconversion

-

-

PWY-5083

NADP biosynthesis

-

-

PWY-8148

NADPH to cytochrome c oxidase via plastocyanin

-

-

PWY-8271

Naphthalene degradation

-

-

naringenin biosynthesis (engineered)

-

-

PWY-7397

naringenin C-glucosylation

-

-

PWY-6602

Neomycin, kanamycin and gentamicin biosynthesis

-

-

Nicotinate and nicotinamide metabolism

-

-

nicotine degradation IV

-

-

PWY66-201

nicotine degradation V

-

-

PWY66-221

nitrate reduction I (denitrification)

-

-

DENITRIFICATION-PWY

nitrate reduction II (assimilatory)

-

-

PWY-381

nitrate reduction VII (denitrification)

-

-

PWY-6748

nitric oxide biosynthesis II (mammals)

-

-

PWY-4983

nitrifier denitrification

-

-

PWY-7084

nitrite-dependent anaerobic methane oxidation

-

-

PWY-6523

Nitrogen metabolism

-

-

nitrogen remobilization from senescing leaves

-

-

PWY-6549

nocardicin A biosynthesis

-

-

PWY-7797

noradrenaline and adrenaline degradation

-

-

PWY-6342

norspermidine biosynthesis

-

-

PWY-6562

nucleoside and nucleotide degradation (archaea)

-

-

PWY-5532

O-Antigen nucleotide sugar biosynthesis

-

-

o-diquinones biosynthesis

-

-

PWY-6752

octane oxidation

octopamine biosynthesis

-

-

PWY-7297

okenone biosynthesis

-

-

PWY-7591

oleandomycin activation/inactivation

-

-

PWY-6972

One carbon pool by folate

-

-

orientin and isoorientin biosynthesis I

-

-

PWY-7188

oryzalexin D and E biosynthesis

-

-

PWY-7478

oryzalide A biosynthesis

-

-

PWY-7481

Other glycan degradation

-

-

oxidative decarboxylation of pyruvate

oxidative decarboxylation of pyruvate

-

-

Oxidative phosphorylation

-

-

oxidative phosphorylation

oxidative phosphorylation

-

-

Pantothenate and CoA biosynthesis

-

-

pantothenate biosynthesis

pantothenate biosynthesis

-

-

parkeol biosynthesis

-

-

PWY-8027

partial TCA cycle (obligate autotrophs)

-

-

PWY-5913

Penicillin and cephalosporin biosynthesis

-

-

pentachlorophenol degradation

-

-

PCPDEG-PWY

Pentose and glucuronate interconversions

-

-

Pentose phosphate pathway

-

-

pentose phosphate pathway

pentose phosphate pathway

-

-

pentose phosphate pathway (non-oxidative branch) I

-

-

NONOXIPENT-PWY

pentose phosphate pathway (oxidative branch) I

-

-

OXIDATIVEPENT-PWY

peptido-conjugates in tissue regeneration biosynthesis

-

-

PWY-8355

peptidoglycan recycling I

-

-

PWY0-1261

phaselate biosynthesis

-

-

PWY-6320

phenol degradation

phenol degradation

-

-

Phenylalanine metabolism

-

-

phenylalanine metabolism

phenylalanine metabolism

-

-

phenylethanol biosynthesis

-

-

PWY-5751

phenylpropanoid biosynthesis

-

-

PWY-361

Phenylpropanoid biosynthesis

-

-

phenylpropanoid biosynthesis

phenylpropanoid biosynthesis

-

-

phenylpropanoid biosynthesis, initial reactions

-

-

PWY1F-467

phenylpropanoids methylation (ice plant)

-

-

PWY-7498

phloridzin biosynthesis

-

-

PWY-6515

phosalacine biosynthesis

-

-

PWY-7769

phosphatidate metabolism, as a signaling molecule

-

-

PWY-7039

phosphatidylcholine acyl editing

-

-

PWY-6803

phosphatidylethanolamine bioynthesis

phosphatidylethanolamine bioynthesis

-

-

phosphatidylserine and phosphatidylethanolamine biosynthesis I

-

-

PWY-5669

phosphinothricin tripeptide biosynthesis

-

-

PWY-6322

phospholipases

-

-

LIPASYN-PWY

phospholipid desaturation

-

-

PWY-762

phospholipid remodeling (phosphatidate, yeast)

-

-

PWY-7417

phospholipid remodeling (phosphatidylcholine, yeast)

-

-

PWY-7416

phospholipid remodeling (phosphatidylethanolamine, yeast)

-

-

PWY-7409

Phosphonate and phosphinate metabolism

-

-

phosphopantothenate biosynthesis I

-

-

PANTO-PWY

photorespiration I

-

-

PWY-181

photorespiration II

-

-

PWY-8362

photorespiration III

-

-

PWY-8363

Photosynthesis

-

-

photosynthesis

-

-

photosynthesis light reactions

-

-

PWY-101

photosynthetic 3-hydroxybutanoate biosynthesis (engineered)

-

-

PWY-7218

phycocyanobilin biosynthesis

-

-

PWY-5917

phycoerythrobilin biosynthesis I

-

-

PWY-5915

phycoerythrobilin biosynthesis II

-

-

PWY-7580

phycourobilin biosynthesis

-

-

PWY-7579

phycoviolobilin biosynthesis

-

-

PWY-7578

phytate degradation I

-

-

PWY-4702

phytocassanes biosynthesis, shared reactions

-

-

PWY-7484

phytochelatins biosynthesis

-

-

PWY-6745

phytochromobilin biosynthesis

-

-

PWY-7170

phytol degradation

-

-

PWY66-389

phytosterol biosynthesis (plants)

-

-

PWY-2541

pinobanksin biosynthesis

-

-

PWY-5059

pinocembrin C-glucosylation

-

-

PWY-7189

plasmalogen degradation

-

-

PWY-7783

plastoquinol-9 biosynthesis I

-

-

PWY-1581

platensimycin biosynthesis

-

-

PWY-8179

polymethylated quercetin biosynthesis

-

-

PWY-7161

polyphosphate metabolism

-

-

PWY-8138

Porphyrin and chlorophyll metabolism

-

-

Porphyrin metabolism

-

-

ppGpp metabolism

-

-

PPGPPMET-PWY

proline metabolism

proline metabolism

-

-

proline to cytochrome bo oxidase electron transfer

-

-

PWY0-1544

propanol degradation

propanol degradation

-

-

protectin biosynthesis

-

-

PWY-8357

protective electron sinks in the thylakoid membrane (PSII to PTOX)

-

-

PWY1YI0-7

protein S-nitrosylation and denitrosylation

-

-

PWY-7798

protein ubiquitination

-

-

PWY-7511

psilocybin biosynthesis

-

-

PWY-7936

purine deoxyribonucleosides salvage

-

-

PWY-7224

Purine metabolism

-

-

purine metabolism

purine metabolism

-

-

purine nucleobases degradation I (anaerobic)

-

-

P164-PWY

purine nucleobases degradation II (anaerobic)

-

-

PWY-5497

putrescine degradation I

-

-

PUTDEG-PWY

putrescine degradation III

-

-

PWY-0

putrescine degradation IV

-

-

PWY-2

putrescine degradation V

-

-

PWY-3

pyrimidine deoxyribonucleotide phosphorylation

-

-

PWY-7197

pyrimidine deoxyribonucleotides biosynthesis from CTP

-

-

PWY-7210

pyrimidine deoxyribonucleotides de novo biosynthesis I

-

-

PWY-7184

pyrimidine deoxyribonucleotides de novo biosynthesis II

-

-

PWY-7187

pyrimidine deoxyribonucleotides de novo biosynthesis III

-

-

PWY-6545

pyrimidine deoxyribonucleotides de novo biosynthesis IV

-

-

PWY-7198

Pyrimidine metabolism

-

-

pyrimidine metabolism

pyrimidine metabolism

-

-

pyruvate decarboxylation to acetyl CoA I

-

-

PYRUVDEHYD-PWY

pyruvate decarboxylation to acetyl CoA II

-

-

PWY-6970

pyruvate fermentation to (R)-acetoin I

-

-

PWY-5938

pyruvate fermentation to (R)-acetoin II

-

-

PWY-5939

pyruvate fermentation to (S)-acetoin

-

-

PWY-6389

pyruvate fermentation to ethanol I

-

-

PWY-5480

pyruvate fermentation to ethanol II

-

-

PWY-5486

pyruvate fermentation to ethanol III

-

-

PWY-6587

pyruvate fermentation to isobutanol (engineered)

-

-

PWY-7111

Pyruvate metabolism

-

-

quercetin sulfate biosynthesis

-

-

PWY-6199

reactive oxygen species degradation

-

-

DETOX1-PWY-1

reductive TCA cycle I

-

-

P23-PWY

resolvin D biosynthesis

-

-

PWY66-397

resveratrol biosynthesis

-

-

PWY-84

retinol biosynthesis

-

-

PWY-6857

Retinol metabolism

-

-

rosmarinic acid biosynthesis I

-

-

PWY-5048

Rubisco shunt

-

-

PWY-5723

S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I

-

-

PWY-4361

sakuranetin biosynthesis

-

-

PWY-5116

salidroside biosynthesis

-

-

PWY-6802

saponin biosynthesis II

-

-

PWY-5756

sciadonate biosynthesis

-

-

PWY-6598

secologanin and strictosidine biosynthesis

-

-

PWY-5290

seleno-amino acid biosynthesis (plants)

-

-

PWY-6936

serotonin and melatonin biosynthesis

-

-

PWY-6030

serotonin degradation

-

-

PWY-6313

serotonin metabolism

serotonin metabolism

-

-

sesamin biosynthesis

-

-

PWY-5469

Sesquiterpenoid and triterpenoid biosynthesis

-

-

solasodine glycosylation

-

-

PWY18C3-4

spermidine biosynthesis I

-

-

BSUBPOLYAMSYN-PWY

spermidine biosynthesis II

-

-

PWY-6559

spermidine biosynthesis III

-

-

PWY-6834

spermine and spermidine degradation I

-

-

PWY-6117

spermine and spermidine degradation III

-

-

PWY-6441

spermine biosynthesis

-

-

ARGSPECAT-PWY

sphingolipid biosynthesis (plants)

-

-

PWY-5129

sphingolipid biosynthesis (yeast)

-

-

SPHINGOLIPID-SYN-PWY

Sphingolipid metabolism

-

-

sphingosine and sphingosine-1-phosphate metabolism

-

-

PWY3DJ-11470

sporopollenin precursors biosynthesis

-

-

PWY-6733

stachyose biosynthesis

-

-

PWY-5337

stachyose degradation

-

-

PWY-6527

Starch and sucrose metabolism

-

-

starch biosynthesis

-

-

PWY-622

starch degradation

starch degradation

-

-

starch degradation I

-

-

PWY-842

starch degradation II

-

-

PWY-6724

starch degradation III

-

-

PWY-6731

starch degradation V

-

-

PWY-6737

stearate biosynthesis I (animals)

-

-

PWY-5972

stellariose and mediose biosynthesis

-

-

PWY-6525

Steroid biosynthesis

-

-

Steroid hormone biosynthesis

-

-

sterol biosynthesis (methylotrophs)

-

-

PWY-8026

Stilbenoid, diarylheptanoid and gingerol biosynthesis

-

-

Streptomycin biosynthesis

-

-

Styrene degradation

-

-

suberin monomers biosynthesis

sucrose biosynthesis I (from photosynthesis)

-

-

SUCSYN-PWY

sucrose biosynthesis II

-

-

PWY-7238

sucrose biosynthesis III

-

-

PWY-7347

sucrose degradation II (sucrose synthase)

-

-

PWY-3801

sucrose degradation III (sucrose invertase)

-

-

PWY-621

sucrose degradation V (sucrose alpha-glucosidase)

-

-

PWY66-373

sulfolipid biosynthesis

sulfolipid biosynthesis

-

-

sulfoquinovosyl diacylglycerol biosynthesis

-

-

PWYQT-4427

Sulfur metabolism

-

-

superoxide radicals degradation

-

-

DETOX1-PWY

superpathway of fermentation (Chlamydomonas reinhardtii)

-

-

PWY4LZ-257

superpathway of glucose and xylose degradation

-

-

PWY-6901

superpathway of indole-3-acetate conjugate biosynthesis

-

-

PWY-1782

superpathway of methylsalicylate metabolism

-

-

PWY18C3-25

superpathway of phospholipid biosynthesis II (plants)

-

-

PHOSLIPSYN2-PWY

superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)

-

-

PWY0-166

superpathway of scopolin and esculin biosynthesis

-

-

PWY-7186

superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis

-

-

PWY-7328

syringetin biosynthesis

-

-

PWY-5391

Taurine and hypotaurine metabolism

-

-

TCA cycle II (plants and fungi)

-

-

PWY-5690

TCA cycle III (animals)

-

-

PWY66-398

Terpenoid backbone biosynthesis

-

-

tetrahydrofolate biosynthesis I

-

-

PWY-6614

tetrahydrofolate metabolism

tetrahydrofolate metabolism

-

-

tetrapyrrole biosynthesis I (from glutamate)

-

-

PWY-5188

Thiamine metabolism

-

-

threonine metabolism

threonine metabolism

-

-

thyroid hormone metabolism II (via conjugation and/or degradation)

-

-

PWY-6261

trans-caffeate degradation (aerobic)

-

-

PWY-8003

trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria)

-

-

PWY-6475

trans-zeatin biosynthesis

-

-

PWY-2681

traumatin and (Z)-3-hexen-1-yl acetate biosynthesis

-

-

PWY-5410

trehalose biosynthesis I

-

-

TRESYN-PWY

trehalose biosynthesis II

-

-

PWY-881

trehalose biosynthesis III

-

-

TREHALOSESYN-PWY

trehalose biosynthesis IV

-

-

PWY-2622

trehalose biosynthesis V

-

-

PWY-2661

trehalose degradation I (low osmolarity)

-

-

TREDEGLOW-PWY

trehalose degradation II (cytosolic)

-

-

PWY0-1182

trehalose degradation IV

-

-

PWY-2722

trehalose degradation V

-

-

PWY-2723

triacylglycerol degradation

-

-

LIPAS-PWY

tricin biosynthesis

-

-

PWY-7995

tRNA charging

-

-

TRNA-CHARGING-PWY

tRNA processing

-

-

PWY0-1479

tropane alkaloid biosynthesis

tropane alkaloid biosynthesis

-

-

Tryptophan metabolism

-

-

tryptophan metabolism

tryptophan metabolism

-

-

type I lipoteichoic acid biosynthesis (S. aureus)

-

-

PWY-7817

Tyrosine metabolism

-

-

tyrosine metabolism

tyrosine metabolism

-

-

Ubiquinone and other terpenoid-quinone biosynthesis

-

-

UDP-alpha-D-galactose biosynthesis

-

-

PWY-7344

UDP-alpha-D-glucose biosynthesis

-

-

PWY-7343

UDP-alpha-D-xylose biosynthesis

-

-

PWY-4821

UDP-GlcNAc biosynthesis

UDP-GlcNAc biosynthesis

-

-

UDP-N-acetyl-D-galactosamine biosynthesis II

-

-

PWY-5514

UDP-N-acetyl-D-glucosamine biosynthesis I

-

-

UDPNAGSYN-PWY

UDP-N-acetyl-D-glucosamine biosynthesis II

-

-

UDPNACETYLGALSYN-PWY

ultra-long-chain fatty acid biosynthesis

-

-

PWY-8041

umbelliferone biosynthesis

-

-

PWY-6982

urea cycle

-

-

urea degradation II

-

-

PWY-5704

UTP and CTP de novo biosynthesis

-

-

PWY-7176

valine metabolism

valine metabolism

-

-

Valine, leucine and isoleucine biosynthesis

-

-

Valine, leucine and isoleucine degradation

-

-

vanillin biosynthesis I

-

-

PWY-5665

Various types of N-glycan biosynthesis

-

-

vernolate biosynthesis III

-

-

PWY-6917

very long chain fatty acid biosynthesis I

-

-

PWY-5080

very long chain fatty acid biosynthesis II

-

-

PWY-7036

Vitamin B6 metabolism

-

-

vitamin E biosynthesis (tocopherols)

-

-

PWY-1422

vitamin E biosynthesis (tocotrienols)

-

-

PWY-7436

vitamin E metabolism

vitamin E metabolism

-

-

VTC2 cycle

-

-

PWY4FS-12

xanthohumol biosynthesis

-

-

PWY-5135

xanthommatin biosynthesis

-

-

PWY-8249

xyloglucan degradation II (exoglucanase)

-

-

PWY-6807

Zeatin biosynthesis

-

-

zymosterol biosynthesis

-

-

PWY-6074

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Oryza sativa Japonica Group

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apical meristem

Oryza sativa Japonica Group

high expression level

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

high expression

Manually annotated by BRENDA team

Oryza sativa Japonica Group

Q2QWU2, Q53WJ1, Q5VP94, Q6YV04

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

P0C0L0, P0C0L1, Q0JEQ2, Q10N21, Q69SV0, Q6ZJJ1, Q7XJ02, Q84LF7, Q9FE01

-

765656, 766125, 766827, 778926

Manually annotated by BRENDA team

Oryza sativa Japonica Group

isoform AO1 is expressed in the developing rice grains at 1, 7, and 21 days after flowering

Manually annotated by BRENDA team

Oryza sativa Japonica Group

PGL, encoding chlorophyllide a oxygenase 1, is mainly expressed in the chlorenchyma

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

show

show

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

show

show

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

show

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

Q10CE4, Q7FAS1, Q8H3I4

moderate expression level

Manually annotated by BRENDA team

show

show

show

show

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

show

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

show

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

show

Oryza sativa Japonica Group

high expression

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

highest expression in the leaf, followed by the pod and the panicle

Manually annotated by BRENDA team

show

show

show

show

show

show

shoot apical meristem

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

show

Oryza sativa Japonica Group

Q2QWU2, Q5VP94, Q6YV04, Q84LF7

-

Manually annotated by BRENDA team

show

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

young tiller bud

Manually annotated by BRENDA team

Oryza sativa Japonica Group

expresses preferentially in xylem parenchyma cells of vasculature tissues

Manually annotated by BRENDA team

additional information

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Oryza sativa Japonica Group

B7EHV0, P15280, Q6Z2T8

-

737807, 777504, 777934

Manually annotated by BRENDA team

show

show

chloroplast membrane

show

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

Q0DWY3, Q2QZ86, Q6AVA8, Q7XSZ0, Q8H022

-

713287, 736599, 741174, 758054, 761294, 773430

Manually annotated by BRENDA team

show

endoplasmic reticulum

show

endoplasmic reticulum membrane

Oryza sativa Japonica Group

Q05JG2, Q0J185, Q6ZDE3, Q84LF7

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

early endosomes

Manually annotated by BRENDA team

Oryza sativa Japonica Group

A0A0P0XM10, Q0J290, Q0J954, Q7XR46

-

-

Manually annotated by BRENDA team

Golgi apparatus

show

show

show

show

Oryza sativa Japonica Group

O24174, P0C0L0, P0C0L1, Q0JEQ2, Q10N21, Q69SV0, Q6ZJJ1, Q7XJ02, Q84LK3, Q9FE01

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

specifically to the phragmoplast midzone during telophase and cytokinesis

Manually annotated by BRENDA team

plasma membrane

Oryza sativa Japonica Group

-

739446, 751706, 760795, 767735, 767796, 767963

Manually annotated by BRENDA team

show

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

show

thylakoid membrane

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

-

-

Manually annotated by BRENDA team

trans-Golgi network

Oryza sativa Japonica Group

-

Manually annotated by BRENDA team

vacuolar membrane

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

Oryza sativa Japonica Group

-

-

Manually annotated by BRENDA team

additional information

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.

Release 2026.1 (March 2026)