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Information on Organism Methanosarcina mazei

Synonyms:
ATCC 43340 [[Methanococcus frisius Blotevogel et al. 1986]]; culture-collection:VKM:B:1636; DSM 2053; DSM 3318 [[Methanococcus frisius Blotevogel et al. 1986]]; Methanococcus frisius Blotevogel et al. 1986; Methanococcus frisius; Methanococcus mazei; Methanosarcina frisia (Blotevogel et al. 1986) Blotevogel and Fischer 1989; Methanosarcina frisia; Methanosarcina frisius; Methanosarcina mazei (Barker 1936) Mah and Kuhn 1986; Methanosarcina mazeii; Methanosarcina mazei; Methanosarcina sp. MT; OCM 26; strain C 16 [[Methanococcus frisius Blotevogel et al. 1986]]; strain C16 [[Methanococcus frisius Blotevogel et al. 1986]]; strain S-6; VKM B-1636;
Word Map for Organism Methanosarcina mazei
TaxTree of Organism Methanosarcina mazei
Condensed Tree View
cellular organisms
Archaea can be found in Brenda BRENDA pathways(superkingdom)
Euryarchaeota can be found in Brenda BRENDA pathways(phylum)
Stenosarchaea group can be found in Brenda (clade)
Methanomicrobia can be found in Brenda BRENDA pathways(class)
Methanosarcinales can be found in Brenda BRENDA pathways(order)
Methanosarcinaceae can be found in Brenda BRENDA pathways(family)
Methanosarcina can be found in Brenda BRENDA pathways(genus)
Methanosarcina mazei can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,5-anhydrofructose degradation
-
-
PWY-6992
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7965
3,6-anhydro-alpha-L-galactopyranose degradation
-
-
PWY-7562
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
-
-
CHLOROPHYLL-SYN
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
-
-
PWY-5531
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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PWY-7159
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3PG-factor 420 biosynthesis
-
-
PWY-8113
4-deoxy-L-threo-hex-4-enopyranuronate degradation
-
-
PWY-6507
4-methylphenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7963
5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7969
5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7966
5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7967
5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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-
PWY-7968
acetate and ATP formation from acetyl-CoA I
-
-
PWY0-1312
acetate fermentation
-
-
acetylene degradation (anaerobic)
-
-
P161-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine salvage
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-
PWY-6610
adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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-
PWY-7964
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I
-
-
PWY-5509
adenosylcobalamin biosynthesis from adenosylcobinamide-GDP II
-
-
PWY-7975
adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide
-
-
PWY-7962
adenosylcobinamide-GDP salvage from cobinamide II
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-
PWY-7972
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
alanine metabolism
-
-
Alanine, aspartate and glutamate metabolism
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-
alkylnitronates degradation
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-
PWY-723
all-trans-farnesol biosynthesis
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-
PWY-6859
Amino sugar and nucleotide sugar metabolism
-
-
Aminoacyl-tRNA biosynthesis
-
-
Aminobenzoate degradation
-
-
aminopropanol phosphate biosynthesis
-
-
aminopropanol phosphate biosynthesis I
-
-
PWY-5443
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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-
PWY-7383
Arginine biosynthesis
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-
ATP biosynthesis
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-
PWY-7980
bacterial bioluminescence
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PWY-7723
benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
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-
PWY-7970
beta-Alanine metabolism
-
-
Bifidobacterium shunt
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-
P124-PWY
Biosynthesis of secondary metabolites
-
-
bisabolene biosynthesis (engineered)
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-
PWY-7102
C25,25 CDP-archaeol biosynthesis
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PWY-8365
C4 and CAM-carbon fixation
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-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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-
PWY-7117
Carbon fixation in photosynthetic organisms
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-
Carbon fixation pathways in prokaryotes
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-
carbon tetrachloride degradation II
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-
PWY-5372
chitin biosynthesis
-
-
PWY-6981
chitin degradation I (archaea)
-
-
PWY-6855
Chloroalkane and chloroalkene degradation
-
-
chorismate metabolism
-
-
cis-zeatin biosynthesis
-
-
PWY-2781
Citrate cycle (TCA cycle)
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-
citric acid cycle
-
-
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
coenzyme A metabolism
-
-
coenzyme B/coenzyme M regeneration I (methanophenazine-dependent)
-
-
PWY-5207
coenzyme M biosynthesis
-
-
cyanate degradation
Cyanoamino acid metabolism
-
-
Cysteine and methionine metabolism
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-
cysteine metabolism
-
-
D-fructuronate degradation
-
-
PWY-7242
D-galacturonate degradation I
-
-
GALACTUROCAT-PWY
D-glucosaminate degradation
-
-
PWY-7310
D-sorbitol biosynthesis I
-
-
PWY-5054
diethylphosphate degradation
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-
PWY-5491
Drug metabolism - other enzymes
-
-
Entner Doudoroff pathway
-
-
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
PWY-2221
Entner-Doudoroff shunt
-
-
ENTNER-DOUDOROFF-PWY
ethanolamine utilization
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-
PWY0-1477
Ether lipid metabolism
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-
factor 420 biosynthesis
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-
factor 420 biosynthesis I (archaea)
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PWY-8112
factor 420 biosynthesis II (mycobacteria)
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PWY-5198
Fe(II) oxidation
-
-
PWY-6692
flavin biosynthesis
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-
flavin biosynthesis I (bacteria and plants)
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RIBOSYN2-PWY
flavin biosynthesis II (archaea)
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-
PWY-6167
flavin biosynthesis III (fungi)
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PWY-6168
Folate biosynthesis
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-
folate transformations I
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PWY-2201
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde oxidation I
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-
RUMP-PWY
formate oxidation to CO2
-
-
PWY-1881
Fructose and mannose metabolism
-
-
Galactose metabolism
-
-
gallate degradation III (anaerobic)
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-
P3-PWY
GDP-alpha-D-glucose biosynthesis
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PWY-5661
GDP-mannose biosynthesis
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PWY-5659
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
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-
PWY66-399
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glutamate and glutamine metabolism
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-
Glycerolipid metabolism
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-
Glycerophospholipid metabolism
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-
glycine degradation (reductive Stickland reaction)
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PWY-8015
glycine metabolism
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-
glycogen degradation I
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GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glycogen metabolism
-
-
glycolysis
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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-
ANAGLYCOLYSIS-PWY
glycolysis IV
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-
PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glyoxylate and dicarboxylate metabolism
-
-
glyoxylate assimilation
-
-
PWY-5744
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
glyphosate degradation III
-
-
PWY-7807
guanine and guanosine salvage I
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-
PWY-6620
guanine and guanosine salvage II
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-
PWY-6599
heme b biosynthesis I (aerobic)
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-
HEME-BIOSYNTHESIS-II
heme b biosynthesis II (oxygen-independent)
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-
HEMESYN2-PWY
heme b biosynthesis IV (Gram-positive bacteria)
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PWY-7766
heme b biosynthesis V (aerobic)
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-
HEME-BIOSYNTHESIS-II-1
heme metabolism
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-
heterolactic fermentation
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-
P122-PWY
hydrogen oxidation I (aerobic)
-
-
P283-PWY
hydrogen production
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-
hydrogen production III
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PWY-6759
hydrogen production VI
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PWY-6780
hydrogen production VIII
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PWY-6785
incomplete reductive TCA cycle
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-
P42-PWY
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole-3-acetate biosynthesis II
-
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PWY-581
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
PWY-5026
Inositol phosphate metabolism
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-
isopenicillin N biosynthesis
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PWY-5629
isoprene biosynthesis I
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PWY-6270
isoprene biosynthesis II (engineered)
-
-
PWY-7391
isoprenoid biosynthesis
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-
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
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PWY-8294
L-cysteine biosynthesis II (tRNA-dependent)
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PWY-6308
L-glutamate degradation VII (to butanoate)
-
-
GLUDEG-II-PWY
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-lysine fermentation to acetate and butanoate
-
-
P163-PWY
L-pyrrolysine biosynthesis
-
-
PWY-6994
L-selenocysteine biosynthesis I (bacteria)
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-
PWY0-901
L-selenocysteine biosynthesis II (archaea and eukaryotes)
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-
PWY-6281
L-threonine degradation I
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-
PWY-5437
lactate fermentation
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-
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
lipid metabolism
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-
Lysine biosynthesis
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-
Lysine degradation
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-
lysine metabolism
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-
malate/L-aspartate shuttle pathway
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-
MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
-
-
Methane metabolism
-
-
methanogenesis from acetate
-
-
METH-ACETATE-PWY
methanogenesis from CO2
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-
methanogenesis from dimethylamine
-
-
PWY-5248
methanogenesis from H2 and CO2
-
-
METHANOGENESIS-PWY
methanogenesis from methanol
-
-
CO2FORM-PWY
methanogenesis from methoxylated aromatic compounds
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PWY-8304
methanogenesis from methylamine
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PWY-5247
methanogenesis from trimethylamine
-
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PWY-5250
methionine metabolism
-
-
methyl-coenzyme M reduction to methane
-
-
METHFORM-PWY
methylaspartate cycle
methylerythritol phosphate pathway I
-
-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
-
-
PWY-7560
methylglyoxal degradation V
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-
PWY-5458
mevalonate metabolism
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-
mevalonate pathway I (eukaryotes and bacteria)
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-
PWY-922
mevalonate pathway II (haloarchaea)
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-
PWY-6174
mevalonate pathway III (Thermoplasma)
-
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PWY-7524
mevalonate pathway IV (archaea)
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PWY-8125
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
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FERMENTATION-PWY
mono-trans, poly-cis decaprenyl phosphate biosynthesis
-
-
PWY-6383
N-Glycan biosynthesis
-
-
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADPH to cytochrome c oxidase via plastocyanin
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-
PWY-8271
Neomycin, kanamycin and gentamicin biosynthesis
-
-
nitrate assimilation
-
-
nitrate reduction V (assimilatory)
-
-
PWY-5675
nitrogen fixation I (ferredoxin)
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-
N2FIX-PWY
Nitrogen metabolism
-
-
Nitrotoluene degradation
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-
nocardicin A biosynthesis
-
-
PWY-7797
non-pathway related
-
-
oleandomycin activation/inactivation
-
-
PWY-6972
One carbon pool by folate
-
-
ophiobolin F biosynthesis
-
-
PWY-7720
ornithine metabolism
-
-
oxalate degradation III
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-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
Oxidative phosphorylation
-
-
oxidative phosphorylation
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-
Pantothenate and CoA biosynthesis
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-
pantothenate biosynthesis
-
-
Penicillin and cephalosporin biosynthesis
-
-
Pentose phosphate pathway
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-
pentose phosphate pathway
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-
pentose phosphate pathway (oxidative branch) II
-
-
PWY-7796
phenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP
-
-
PWY-7961
phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phospholipases
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LIPASYN-PWY
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
phosphopantothenate biosynthesis II
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PWY-3961
phosphopantothenate biosynthesis III (archaea)
-
-
PWY-6654
Photosynthesis
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-
photosynthesis
-
-
photosynthesis light reactions
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-
PWY-101
plasmalogen biosynthesis I (aerobic)
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-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
polyphosphate metabolism
-
-
PWY-8138
Porphyrin and chlorophyll metabolism
-
-
Propanoate metabolism
-
-
protein N-glycosylation initial phase (eukaryotic)
-
-
MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
Purine metabolism
-
-
purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
pyruvate fermentation to acetate II
-
-
PWY-5482
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to propanoate I
-
-
P108-PWY
Pyruvate metabolism
-
-
reductive acetyl coenzyme A pathway
-
-
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
-
-
CODH-PWY
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
Riboflavin metabolism
-
-
ribulose monophosphate pathway
-
-
rubber biosynthesis
-
-
PWY-5815
Selenocompound metabolism
-
-
selenocysteine biosynthesis
-
-
serine metabolism
-
-
sphingolipid biosynthesis (mammals)
-
-
PWY-7277
Sphingolipid metabolism
-
-
sphingomyelin metabolism
-
-
PWY3DJ-11281
Starch and sucrose metabolism
-
-
starch biosynthesis
-
-
PWY-622
stellatic acid biosynthesis
-
-
PWY-7736
Streptomycin biosynthesis
-
-
Styrene degradation
-
-
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation IV (sucrose phosphorylase)
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-
PWY-5384
sulfated glycosaminoglycan metabolism
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-
sulfide oxidation IV (mitochondria)
-
-
PWY-7927
sulfoacetaldehyde degradation I
-
-
PWY-1281
sulfolactate degradation II
-
-
PWY-6637
sulfopterin metabolism
-
-
Sulfur metabolism
-
-
superpathway of adenosylcobalamin salvage from cobinamide I
-
-
COBALSYN-PWY
superpathway of adenosylcobalamin salvage from cobinamide II
-
-
PWY-6269
superpathway of coenzyme A biosynthesis III (mammals)
-
-
COA-PWY-1
superpathway of fermentation (Chlamydomonas reinhardtii)
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-
PWY4LZ-257
superpathway of glyoxylate cycle and fatty acid degradation
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-
PWY-561
Taurine and hypotaurine metabolism
-
-
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VIII (Chlamydia)
-
-
TCA-1
Terpenoid backbone biosynthesis
-
-
tetrahydrofolate metabolism
-
-
tetrahydromethanopterin biosynthesis
-
-
PWY-6148
tetrapyrrole biosynthesis I (from glutamate)
-
-
PWY-5188
Thiamine metabolism
-
-
thioredoxin pathway
-
-
THIOREDOX-PWY
thiosulfate disproportionation IV (rhodanese)
-
-
PWY-5350
threonine metabolism
-
-
toxoflavin biosynthesis
-
-
PWY-7991
trehalose degradation I (low osmolarity)
-
-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
-
-
PWY0-1182
trehalose degradation IV
-
-
PWY-2722
trehalose degradation V
-
-
PWY-2723
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA processing
-
-
PWY0-1479
tRNA splicing I
-
-
PWY-6689
Tryptophan metabolism
-
-
tyrosine metabolism
-
-
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
Various types of N-glycan biosynthesis
-
-
vitamin B12 metabolism
-
-
Zeatin biosynthesis
-
-
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top print hide
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
P80655 and P80653 and P80651 and P80654 and P80656 and P80650
-
Manually annotated by BRENDA team
top print hide
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Methanosarcina mazei)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA