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Information on Organism Glycine soja

Synonyms:
Glycine soja; Glycine soja Siebold & Zucc.; wild soybean;
Word Map for Organism Glycine soja
TaxTree of Organism Glycine soja
Condensed Tree View
cellular organisms
Eukaryota can be found in Brenda BRENDA pathways(superkingdom)
Viridiplantae can be found in Brenda BRENDA pathways(kingdom)
Streptophyta can be found in Brenda BRENDA pathways(phylum)
Streptophytina can be found in Brenda (subphylum)
Embryophyta can be found in Brenda BRENDA pathways(clade)
Tracheophyta can be found in Brenda BRENDA pathways(clade)
Euphyllophyta can be found in Brenda BRENDA pathways(clade)
Spermatophyta can be found in Brenda BRENDA pathways(clade)
Magnoliopsida can be found in Brenda BRENDA pathways(class)
Mesangiospermae can be found in Brenda (clade)
eudicotyledons can be found in Brenda BRENDA pathways(clade)
Gunneridae can be found in Brenda BRENDA pathways(clade)
Pentapetalae can be found in Brenda (clade)
rosids can be found in Brenda BRENDA pathways(clade)
fabids can be found in Brenda BRENDA pathways(clade)
Fabales can be found in Brenda BRENDA pathways(order)
Fabaceae can be found in Brenda BRENDA pathways(family)
Papilionoideae can be found in Brenda BRENDA pathways(subfamily)
50 kb inversion clade can be found in Brenda (clade)
NPAAA clade can be found in Brenda (clade)
indigoferoid/millettioid clade can be found in Brenda (clade)
Phaseoleae can be found in Brenda BRENDA pathways(tribe)
Glycine can be found in Brenda (genus)
Glycine subgen. Soja can be found in Brenda BRENDA pathways(subgenus)
Glycine soja can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(aminomethyl)phosphonate degradation
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PWY-7805
1,3-propanediol biosynthesis (engineered)
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PWY-7385
1,5-anhydrofructose degradation
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PWY-6992
1-methylpyrrolinium biosynthesis
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PWY-5315
2,3-trans-flavanols biosynthesis
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PWY-6029
3-phosphoinositide degradation
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PWY-6368
4-aminobutanoate degradation V
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PWY-5022
4-hydroxy-2-nonenal detoxification
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PWY-7112
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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PWY-7832
abscisic acid biosynthesis
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PWY-695
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
adenosine nucleotides degradation I
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PWY-6596
adenosine nucleotides degradation II
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SALVADEHYPOX-PWY
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alpha-linolenate metabolites biosynthesis
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PWY-8398
alpha-Linolenic acid metabolism
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-
Amaryllidacea alkaloids biosynthesis
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PWY-7826
Amino sugar and nucleotide sugar metabolism
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Aminobenzoate degradation
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-
ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anandamide lipoxygenation
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PWY-8056
arachidonate metabolites biosynthesis
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PWY-8397
Arachidonic acid metabolism
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-
arachidonic acid metabolism
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-
Arginine and proline metabolism
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Arginine biosynthesis
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aromatic polyketides biosynthesis
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PWY-6316
arsenate detoxification I
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-
PWY-8264
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Ascorbate and aldarate metabolism
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ascorbate metabolism
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ATP biosynthesis
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PWY-7980
Atrazine degradation
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beta-alanine biosynthesis I
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PWY-3981
biosynthesis of Lewis epitopes (H. pylori)
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PWY-7833
Biosynthesis of secondary metabolites
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Biosynthesis of unsaturated fatty acids
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Brassinosteroid biosynthesis
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bupropion degradation
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PWY66-241
C20 prostanoid biosynthesis
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PWY66-374
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
caffeine degradation III (bacteria, via demethylation)
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PWY-6538
Caffeine metabolism
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Calvin-Benson-Bassham cycle
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CALVIN-PWY
camalexin biosynthesis
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CAMALEXIN-SYN
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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Carotenoid biosynthesis
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carotenoid biosynthesis
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cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
chitin biosynthesis
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PWY-6981
Chloroalkane and chloroalkene degradation
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chorismate biosynthesis from 3-dehydroquinate
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PWY-6163
chorismate metabolism
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CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
Cutin, suberine and wax biosynthesis
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Cyanoamino acid metabolism
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cyclic electron flow
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PWY-8270
Cysteine and methionine metabolism
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cysteine metabolism
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denitrification
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di-homo-gamma-linolenate metabolites biosynthesis
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PWY-8396
diacylglycerol and triacylglycerol biosynthesis
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TRIGLSYN-PWY
Diterpenoid biosynthesis
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divinyl ether biosynthesis II
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PWY-5409
docosahexaenoate metabolites biosynthesis
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PWY-8400
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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dTMP de novo biosynthesis (mitochondrial)
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PWY66-385
ethanol degradation IV
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PWY66-162
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis IV (engineered)
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PWY-7126
ethene biosynthesis V (engineered)
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PWY-7124
Fatty acid biosynthesis
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fatty acid biosynthesis initiation (type II)
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PWY-4381
Fatty acid degradation
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Fe(II) oxidation
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PWY-6692
Flavone and flavonol biosynthesis
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flavonoid biosynthesis
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PWY1F-FLAVSYN
Flavonoid biosynthesis
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flavonoid biosynthesis (in equisetum)
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PWY-6787
flavonoid di-C-glucosylation
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PWY-7897
flavonol biosynthesis
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PWY-3101
folate polyglutamylation
folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
folate transformations III (E. coli)
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1CMET2-PWY
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formate oxidation to CO2
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PWY-1881
Fructose and mannose metabolism
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Galactose metabolism
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gibberellin biosynthesis III (early C-13 hydroxylation)
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PWY-5035
gibberellin inactivation I (2beta-hydroxylation)
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PWY-102
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis
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gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione metabolism
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glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
Glycerolipid metabolism
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-
glycine betaine degradation I
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PWY-3661
glycine betaine degradation II (mammalian)
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PWY-3661-1
glycine betaine degradation III
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PWY-8325
glycine biosynthesis I
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GLYSYN-PWY
glycine metabolism
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Glycine, serine and threonine metabolism
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glycogen metabolism
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-
glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
Glycosphingolipid biosynthesis - globo and isoglobo series
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Glycosphingolipid biosynthesis - lacto and neolacto series
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Glyoxylate and dicarboxylate metabolism
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glyphosate degradation III
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PWY-7807
gossypol biosynthesis
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PWY-5773
guanosine nucleotides degradation I
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-
PWY-6607
guanosine nucleotides degradation II
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PWY-6606
guanosine nucleotides degradation III
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PWY-6608
histamine degradation
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PWY-6181
Histidine metabolism
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histidine metabolism
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icosapentaenoate metabolites biosynthesis
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PWY-8399
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
inosine 5'-phosphate degradation
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PWY-5695
Inositol phosphate metabolism
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jasmonic acid biosynthesis
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PWY-735
justicidin B biosynthesis
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PWY-6824
L-alanine biosynthesis II
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ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation III
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ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-ascorbate biosynthesis VI (plants, myo-inositol pathway)
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PWY-8142
L-ascorbate degradation II (bacterial, aerobic)
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PWY-6961
L-ascorbate degradation III
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PWY-6960
L-cysteine biosynthesis I
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CYSTSYN-PWY
L-glutamate degradation I
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GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-serine biosynthesis I
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SERSYN-PWY
lacto-series glycosphingolipids biosynthesis
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PWY-7839
leucodelphinidin biosynthesis
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PWY-5152
leucopelargonidin and leucocyanidin biosynthesis
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PWY1F-823
linoleate metabolites biosynthesis
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PWY-8395
Linoleic acid metabolism
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lipid metabolism
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lipoxin biosynthesis
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PWY66-392
matairesinol biosynthesis
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PWY-5466
melatonin degradation I
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PWY-6398
melibiose degradation
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PWY0-1301
Metabolic pathways
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metabolism of disaccharids
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-
Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methane metabolism
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Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanol oxidation to formaldehyde IV
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-
PWY-5506
methionine metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NAD phosphorylation and dephosphorylation
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NADPHOS-DEPHOS-PWY
NAD salvage pathway III (to nicotinamide riboside)
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NAD-BIOSYNTHESIS-II
NAD(P)/NADPH interconversion
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PWY-5083
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
naringenin biosynthesis (engineered)
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PWY-7397
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
nitrate assimilation
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-
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrate reduction VII (denitrification)
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PWY-6748
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
nitrogen fixation I (ferredoxin)
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N2FIX-PWY
Nitrogen metabolism
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nitrogen remobilization from senescing leaves
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PWY-6549
nocardicin A biosynthesis
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PWY-7797
non-pathway related
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nucleoside and nucleotide degradation (archaea)
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PWY-5532
O-Antigen nucleotide sugar biosynthesis
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oleate biosynthesis II (animals and fungi)
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PWY-5996
One carbon pool by folate
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Other glycan degradation
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oxalate degradation III
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PWY-6696
oxalate degradation VI
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PWY-7985
Oxidative phosphorylation
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oxidative phosphorylation
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palmitoleate biosynthesis IV (fungi and animals)
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PWY3O-1801
partial TCA cycle (obligate autotrophs)
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PWY-5913
pentachlorophenol degradation
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PCPDEG-PWY
Pentose phosphate pathway
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-
peptido-conjugates in tissue regeneration biosynthesis
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-
PWY-8355
Phenylalanine metabolism
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-
Phenylalanine, tyrosine and tryptophan biosynthesis
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Phenylpropanoid biosynthesis
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phloridzin biosynthesis
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PWY-6515
photorespiration I
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PWY-181
photorespiration II
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PWY-8362
photorespiration III
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PWY-8363
Photosynthesis
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photosynthesis
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photosynthesis light reactions
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PWY-101
pinobanksin biosynthesis
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PWY-5059
polyamine pathway
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proanthocyanidins biosynthesis from flavanols
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PWY-641
protectin biosynthesis
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PWY-8357
protective electron sinks in the thylakoid membrane (PSII to PTOX)
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PWY1YI0-7
protein ubiquitination
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PWY-7511
Purine metabolism
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purine metabolism
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purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
Pyrimidine metabolism
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pyrimidine metabolism
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Pyruvate metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
reductive acetyl coenzyme A pathway
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resolvin D biosynthesis
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PWY66-397
retinol biosynthesis
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PWY-6857
Retinol metabolism
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Rubisco shunt
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PWY-5723
seleno-amino acid biosynthesis (plants)
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PWY-6936
serine metabolism
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sesamin biosynthesis
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PWY-5469
sorgoleone biosynthesis
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PWY-5987
spermine and spermidine degradation I
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PWY-6117
Sphingolipid metabolism
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stachyose degradation
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PWY-6527
Starch and sucrose metabolism
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starch degradation
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Steroid biosynthesis
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Steroid hormone biosynthesis
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sterol:steryl ester interconversion (yeast)
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PWY-7424
streptorubin B biosynthesis
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PWY1A0-6120
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
Sulfur metabolism
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superoxide radicals degradation
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DETOX1-PWY
Taurine and hypotaurine metabolism
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-
teichuronic acid biosynthesis (B. subtilis 168)
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PWY-7820
theophylline degradation
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PWY-6999
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
triacylglycerol degradation
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LIPAS-PWY
Tryptophan metabolism
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-
tryptophan metabolism
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UDP-alpha-D-glucuronate biosynthesis (from myo-inositol)
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PWY-4841
UDP-N-acetyl-D-galactosamine biosynthesis I
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PWY-5512
UDP-N-acetyl-D-galactosamine biosynthesis II
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PWY-5514
urea cycle
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urea degradation II
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PWY-5704
UTP and CTP dephosphorylation II
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-
PWY-7177
vanillin biosynthesis I
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-
PWY-5665
xanthohumol biosynthesis
-
-
PWY-5135
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top print hide
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
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expression of GS50
Manually annotated by BRENDA team
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analysis of flavonoids in flower petals, overview
Manually annotated by BRENDA team
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young, expression of GS50
Manually annotated by BRENDA team
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expression of GS50 and GS52
Manually annotated by BRENDA team
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green, expression of GS50
Manually annotated by BRENDA team
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expression of GS50 and GS52
Manually annotated by BRENDA team
additional information
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
the catalytic domain of the GS52 ectoapyrase is extracellular and therefore, must act to hydrolyze extracellular nucleotides
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Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Glycine soja)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA