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Information on Organism Geobacillus thermodenitrificans

Synonyms:
ATCC 29492; Bacillus sp. BGSC W9A21; Bacillus sp. BGSC W9A45; Bacillus sp. BGSC W9A54; Bacillus sp. BGSC W9A5; Bacillus sp. BGSC W9A65; Bacillus sp. BGSC W9A66; Bacillus sp. BGSC W9A67; Bacillus sp. BGSC W9A69; Bacillus sp. BGSC W9A71; Bacillus sp. BGSC W9A73; Bacillus sp. BGSC W9A74; Bacillus sp. BGSC W9A86; Bacillus sp. BGSC W9A87; Bacillus sp. BGSC W9A91; Bacillus thermodenitrificans (ex Klaushofer and Hollaus 1970) Manachini et al. 2000; "Bacillus thermodenitrificans" Klaushofer and Hollaus 1970; Bacillus thermodenitrificans; BGSC 94A1; DSM 465; Geobacillus sp. A333; Geobacillus sp. F84a; Geobacillus sp. G11MC16; Geobacillus thermodenitrificans (Manachini et al. 2000) Nazina et al. 2001 emend. Cihan et al. 2011; Geobacillus thermodenitrificans (Manachini et al. 2000) Nazina et al. 2001 emend. Coorevits et al. 2012; Geobacillus thermodenitrificans; LMG 17532; LMG:17532; strain R-35647; Bacillus denitrificans; Geobacillus thermodenitrificans (Manachini et al. 2000) Nazina et al. 2001; [Bacillus] sp. BGSC W9A21; [Bacillus] sp. BGSC W9A45; [Bacillus] sp. BGSC W9A5; [Bacillus] sp. BGSC W9A54; [Bacillus] sp. BGSC W9A65; [Bacillus] sp. BGSC W9A66; [Bacillus] sp. BGSC W9A67; [Bacillus] sp. BGSC W9A69; [Bacillus] sp. BGSC W9A71; [Bacillus] sp. BGSC W9A73; [Bacillus] sp. BGSC W9A74; [Bacillus] sp. BGSC W9A86; [Bacillus] sp. BGSC W9A87; [Bacillus] sp. BGSC W9A91;
Word Map for Organism Geobacillus thermodenitrificans
TaxTree of Organism Geobacillus thermodenitrificans
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Bacilli can be found in Brenda BRENDA pathways(class)
Bacillales can be found in Brenda BRENDA pathways(order)
Bacillaceae can be found in Brenda BRENDA pathways(family)
Geobacillus can be found in Brenda BRENDA pathways(genus)
Geobacillus thermodenitrificans can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1,4)-beta-D-xylan degradation
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PWY-6717
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1,5-anhydrofructose degradation
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PWY-6992
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
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PWY-5531
3-hydroxypropanoate cycle
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PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3-methyl-branched fatty acid alpha-oxidation
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PWY66-387
3-methylbutanol biosynthesis (engineered)
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PWY-6871
5,6-dimethylbenzimidazole biosynthesis I (aerobic)
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PWY-5523
6-gingerol analog biosynthesis (engineered)
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PWY-6920
acetaldehyde biosynthesis I
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PWY-6333
acetylene degradation (anaerobic)
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P161-PWY
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alkane biosynthesis II
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PWY-7033
alkane oxidation
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PWY-2724
alkylnitronates degradation
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PWY-723
alpha-Linolenic acid metabolism
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Amino sugar and nucleotide sugar metabolism
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aminopropylcadaverine biosynthesis
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PWY0-1303
ammonia assimilation cycle III
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AMMASSIM-PWY
ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anapleurotic synthesis of oxalacetate
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anthranilate degradation IV (aerobic)
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PWY-6504
arachidonate biosynthesis
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Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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aromatic biogenic amine degradation (bacteria)
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PWY-7431
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
Ascorbate and aldarate metabolism
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ATP biosynthesis
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PWY-7980
beta-(1,4)-mannan degradation
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PWY-7456
beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
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PWY-7586
beta-Alanine metabolism
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Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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biotin biosynthesis
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biotin-carboxyl carrier protein assembly
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PWY0-1264
bisucaberin biosynthesis
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PWY-6381
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
cadaverine biosynthesis
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PWY0-1601
canavanine degradation
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PWY-31
Caprolactam degradation
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capsaicin biosynthesis
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PWY-5710
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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cellulose and hemicellulose degradation (cellulolosome)
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PWY-6784
cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
ceramide and sphingolipid recycling and degradation (yeast)
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PWY-7119
ceramide biosynthesis
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ceramide degradation by alpha-oxidation
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PWY66-388
Chloroalkane and chloroalkene degradation
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Citrate cycle (TCA cycle)
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citric acid cycle
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cutin biosynthesis
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PWY-321
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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D-Amino acid metabolism
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D-lactate to cytochrome bo oxidase electron transfer
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PWY0-1565
d-mannose degradation
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D-mannose degradation I
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MANNCAT-PWY
D-mannose degradation II
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PWY3O-1743
d-xylose degradation
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D-xylose degradation I
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XYLCAT-PWY
D-xylose degradation to ethylene glycol (engineered)
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PWY-7178
degradation of pentoses
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denitrification
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desferrioxamine B biosynthesis
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PWY-6376
desferrioxamine E biosynthesis
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PWY-6375
detoxification of reactive carbonyls in chloroplasts
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PWY-6786
diethylphosphate degradation
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PWY-5491
dopamine degradation
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PWY6666-2
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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Entner Doudoroff pathway
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erythritol biosynthesis I
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PWY-8372
erythritol biosynthesis II
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PWY-8373
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation III
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PWY66-161
ethanol degradation IV
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PWY66-162
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
ethene biosynthesis II (microbes)
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PWY-6853
ethene biosynthesis III (microbes)
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PWY-6854
fatty acid alpha-oxidation I (plants)
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PWY-2501
Fatty acid biosynthesis
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Fatty acid degradation
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fatty acid salvage
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PWY-7094
Fe(II) oxidation
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PWY-6692
flavin biosynthesis
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flavin biosynthesis I (bacteria and plants)
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RIBOSYN2-PWY
flavin biosynthesis III (fungi)
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PWY-6168
flavin salvage
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PWY66-366
Folate biosynthesis
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formaldehyde assimilation I (serine pathway)
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PWY-1622
Fructose and mannose metabolism
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Galactose metabolism
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gamma-glutamyl cycle
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PWY-4041
gamma-linolenate biosynthesis II (animals)
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PWY-6000
GDP-mannose biosynthesis
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PWY-5659
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glutamate and glutamine metabolism
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glutamate removal from folates
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PWY-2161B
glutaminyl-tRNAgln biosynthesis via transamidation
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PWY-5921
Glutathione metabolism
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glutathione metabolism
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glycerol-3-phosphate to cytochrome bo oxidase electron transfer
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PWY0-1561
Glycerolipid metabolism
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Glycine, serine and threonine metabolism
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glycogen degradation I
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GLYCOCAT-PWY
glycogen metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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glyoxylate assimilation
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PWY-5744
glyoxylate cycle
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GLYOXYLATE-BYPASS
heme b biosynthesis II (oxygen-independent)
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HEMESYN2-PWY
heme metabolism
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heterolactic fermentation
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P122-PWY
histamine degradation
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PWY-6181
Histidine metabolism
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histidine metabolism
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hypoglycin biosynthesis
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PWY-5826
hypotaurine degradation
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PWY-7387
icosapentaenoate biosynthesis II (6-desaturase, mammals)
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PWY-7049
icosapentaenoate biosynthesis III (8-desaturase, mammals)
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PWY-7724
incomplete reductive TCA cycle
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P42-PWY
Insect hormone biosynthesis
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L-arabinose degradation I
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ARABCAT-PWY
L-arginine degradation I (arginase pathway)
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ARGASEDEG-PWY
L-arginine degradation VI (arginase 2 pathway)
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ARG-PRO-PWY
L-arginine degradation VII (arginase 3 pathway)
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ARG-GLU-PWY
L-asparagine biosynthesis III (tRNA-dependent)
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PWY490-4
L-citrulline biosynthesis
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CITRULBIO-PWY
L-glutamate biosynthesis I
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GLUTSYN-PWY
L-glutamine degradation I
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GLUTAMINDEG-PWY
L-histidine degradation V
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PWY-5031
L-isoleucine degradation II
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PWY-5078
L-lactaldehyde degradation
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-
L-leucine degradation III
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PWY-5076
L-lysine degradation I
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PWY0-461
L-lysine degradation X
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PWY-6328
L-methionine degradation III
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PWY-5082
L-Ndelta-acetylornithine biosynthesis
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PWY-6922
L-phenylalanine degradation III
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PWY-5079
L-proline degradation I
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PROUT-PWY
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tryptophan degradation X (mammalian, via tryptamine)
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PWY-6307
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
lactate fermentation
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leucine metabolism
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leukotriene biosynthesis
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PWY66-375
Limonene and pinene degradation
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limonene degradation IV (anaerobic)
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PWY-8029
linoleate biosynthesis II (animals)
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PWY-6001
lipid metabolism
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long chain fatty acid ester synthesis (engineered)
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PWY-6873
long-chain fatty acid activation
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PWY-5143
lupanine biosynthesis
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PWY-5468
Lysine degradation
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lysine metabolism
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malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
mannitol biosynthesis
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PWY-3881
mannitol degradation II
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PWY-3861
Metabolic pathways
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-
Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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Methanobacterium thermoautotrophicum biosynthetic metabolism
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PWY-6146
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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methyl indole-3-acetate interconversion
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PWY-6303
methylaspartate cycle
methylsalicylate degradation
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PWY18C3-24
Microbial metabolism in diverse environments
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mitochondrial NADPH production (yeast)
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PWY-7269
mixed acid fermentation
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FERMENTATION-PWY
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bd oxidase electron transfer II
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PWY0-1568
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
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PWY0-1567
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Naphthalene degradation
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nitrate reduction I (denitrification)
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-
DENITRIFICATION-PWY
nitrate reduction V (assimilatory)
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PWY-5675
nitrate reduction VII (denitrification)
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PWY-6748
nitric oxide biosynthesis II (mammals)
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PWY-4983
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
nitroethane degradation
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PWY-5355
Nitrogen metabolism
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non-pathway related
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noradrenaline and adrenaline degradation
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PWY-6342
O-Antigen nucleotide sugar biosynthesis
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octane oxidation
oleate beta-oxidation
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PWY0-1337
oleate biosynthesis I (plants)
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PWY-5147
Other glycan degradation
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Oxidative phosphorylation
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oxidative phosphorylation
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palmitate biosynthesis II (type II fatty acid synthase)
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PWY-5971
palmitate biosynthesis III
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PWY-8279
Pantothenate and CoA biosynthesis
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partial TCA cycle (obligate autotrophs)
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PWY-5913
Pentose and glucuronate interconversions
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peptido-conjugates in tissue regeneration biosynthesis
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PWY-8355
Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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peptidoglycan biosynthesis II (staphylococci)
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PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
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PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
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PWY0-1586
peptidoglycan recycling I
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PWY0-1261
phenylalanine metabolism
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phenylethanol biosynthesis
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PWY-5751
phosphatidylcholine acyl editing
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PWY-6803
Photosynthesis
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phytol degradation
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PWY66-389
Porphyrin and chlorophyll metabolism
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proline metabolism
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proline to cytochrome bo oxidase electron transfer
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PWY0-1544
Propanoate metabolism
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propanol degradation
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putrescine biosynthesis III
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PWY-46
putrescine degradation III
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PWY-0
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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pyruvate to cytochrome bd oxidase electron transfer
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PWY-7545
pyruvate to cytochrome bo oxidase electron transfer
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PWY-7544
reactive oxygen species degradation
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DETOX1-PWY-1
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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PWY-6857
Retinol metabolism
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Riboflavin metabolism
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roseoflavin biosynthesis
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PWY-7863
salidroside biosynthesis
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PWY-6802
serotonin degradation
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PWY-6313
serotonin metabolism
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Sphingolipid metabolism
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sphingosine and sphingosine-1-phosphate metabolism
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PWY3DJ-11470
sporopollenin precursors biosynthesis
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PWY-6733
Starch and sucrose metabolism
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starch degradation
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starch degradation I
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PWY-842
stearate biosynthesis I (animals)
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PWY-5972
stearate biosynthesis II (bacteria and plants)
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-
PWY-5989
stearate biosynthesis IV
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PWY-8280
suberin monomers biosynthesis
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PWY-1121
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
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PWY0-1353
succinate to cytochrome bo oxidase electron transfer
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PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sulfopterin metabolism
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-
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
superpathway of methylsalicylate metabolism
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PWY18C3-25
Taurine and hypotaurine metabolism
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taurine degradation I
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PWY-1263
TCA cycle I (prokaryotic)
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-
TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
TCA cycle VIII (Chlamydia)
-
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TCA-1
Thiamine metabolism
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traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
triacylglycerol degradation
-
-
LIPAS-PWY
Tropane, piperidine and pyridine alkaloid biosynthesis
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Tryptophan metabolism
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tryptophan metabolism
-
-
Tyrosine metabolism
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tyrosine metabolism
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Ubiquinone and other terpenoid-quinone biosynthesis
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urea cycle
valine metabolism
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-
Valine, leucine and isoleucine degradation
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-
vitamin K-epoxide cycle
wax esters biosynthesis II
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PWY-5885
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
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optimal cell growth at pH 6.5-7.5 and 50°C, spectrum of carbon sources used for growth by strain HRO10, optimal conditions for enzyme productio, overview
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Geobacillus thermodenitrificans)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA