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Information on Organism Eubacterium barkeri

Synonyms:
ATCC 25849; CIP 104307; Clostridium barkeri Stadtman et al. 1972 (Approved Lists 1980); Clostridium barkeri; culture-collection:VKM:B:1775; DSM 1223; Eubacterium barkeri; Eubacterium barkeri (Stadtman et al. 1972) Collins et al. 1994; Inflabilis barati; "Inflabilis barati" (sic) Prevot 1938; JCM 1389; VKM B-1775; VPI 5359;
Word Map for Organism Eubacterium barkeri
TaxTree of Organism Eubacterium barkeri
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Clostridia can be found in Brenda BRENDA pathways(class)
Eubacteriales can be found in Brenda BRENDA pathways(order)
Eubacteriaceae can be found in Brenda BRENDA pathways(family)
Eubacterium can be found in Brenda BRENDA pathways(genus)
Eubacterium barkeri can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
adenosine nucleotides degradation I
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PWY-6596
adenosine nucleotides degradation II
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SALVADEHYPOX-PWY
all-trans-farnesol biosynthesis
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PWY-6859
Amino sugar and nucleotide sugar metabolism
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Arachidonic acid metabolism
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arachidonic acid metabolism
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Biosynthesis of secondary metabolites
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bisabolene biosynthesis (engineered)
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PWY-7102
C5-Branched dibasic acid metabolism
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caffeine degradation III (bacteria, via demethylation)
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PWY-6538
Carbon fixation pathways in prokaryotes
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Citrate cycle (TCA cycle)
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citric acid cycle
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D-Amino acid metabolism
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D-galactarate degradation I
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GALACTARDEG-PWY
D-glucarate degradation I
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GLUCARDEG-PWY
degradation of sugar acids
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formate oxidation to CO2
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PWY-1881
Galactose metabolism
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glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione-peroxide redox reactions
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PWY-4081
glycine degradation (reductive Stickland reaction)
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PWY-8015
glycine metabolism
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glycolate and glyoxylate degradation I
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GLYCOLATEMET-PWY
Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
guanosine nucleotides degradation I
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PWY-6607
guanosine nucleotides degradation II
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PWY-6606
guanosine nucleotides degradation III
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PWY-6608
inosine 5'-phosphate degradation
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PWY-5695
isoleucine metabolism
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isoprene biosynthesis II (engineered)
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PWY-7391
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-isoleucine biosynthesis III
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PWY-5103
L-lysine biosynthesis I
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DAPLYSINESYN-PWY
L-lysine biosynthesis II
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PWY-2941
L-lysine biosynthesis VI
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PWY-5097
Lysine biosynthesis
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lysine metabolism
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Metabolic pathways
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Methane metabolism
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methylaspartate cycle
methylerythritol phosphate pathway I
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NONMEVIPP-PWY
methylerythritol phosphate pathway II
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PWY-7560
mevalonate metabolism
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mevalonate pathway I (eukaryotes and bacteria)
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PWY-922
mevalonate pathway II (haloarchaea)
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PWY-6174
mevalonate pathway III (Thermoplasma)
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PWY-7524
mevalonate pathway IV (archaea)
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PWY-8125
Microbial metabolism in diverse environments
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mono-trans, poly-cis decaprenyl phosphate biosynthesis
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PWY-6383
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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PWY-6397
Nicotinate and nicotinamide metabolism
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nicotinate degradation I
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PWY-722
nicotinate degradation III
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PWY-5055
nicotine degradation I (pyridine pathway)
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P181-PWY
nicotine degradation III (VPP pathway)
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PWY-7128
non-pathway related
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O-antigen building blocks biosynthesis (E. coli)
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OANTIGEN-PWY
O-Antigen nucleotide sugar biosynthesis
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oxalate degradation III
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PWY-6696
oxalate degradation VI
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PWY-7985
Penicillin and cephalosporin biosynthesis
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Purine metabolism
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purine metabolism
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purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
reactive oxygen species degradation
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DETOX1-PWY-1
reductive acetyl coenzyme A pathway
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reductive glycine pathway of autotrophic CO2 fixation
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PWY-8303
superpathway of photosynthetic hydrogen production
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PWY-7731
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
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PWY-7328
Terpenoid backbone biosynthesis
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theophylline degradation
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PWY-6999
Ubiquinone and other terpenoid-quinone biosynthesis
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UDP-alpha-D-galactofuranose biosynthesis
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PWY-7622
vitamin K-epoxide cycle
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
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inducible by xanthine, selenite and molybdate
Manually annotated by BRENDA team
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not detectable in cells grown on glucose
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Eubacterium barkeri)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA