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Organism related
Word Map for Organism Cichorium intybus
- Cichorium intybus
- inulin
- fructans
- artichoke
- clover
- ryegrass
- lettuce
- tuberosus
- endive
- boar
- plantain
- jerusalem
- birdsfoot
- dandelion
- lucerne
- celery
- chrysanthemi
- skatole
- lolium
-
salad
-
herbage
-
sward
- iceberg
-
bifidobacteria
-
inulin-type
-
oligofructose
- corniculatus
-
trefoil
-
bifidogenic
-
non-digestible
-
taint
- dickeya
-
guaianolide
-
fresh-cut
-
fructooligosaccharides
TaxTree of Organism Cichorium intybus
Condensed Tree View
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EC NUMBER 
COMMENTARY 
-
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(R)-cysteate degradation
-
-
PWY-6642
(S)-lactate fermentation to propanoate, acetate and hydrogen
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-
PWY-8086
(S)-reticuline biosynthesis I
-
-
PWY-3581
1,5-anhydrofructose degradation
-
-
PWY-6992
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-phosphoinositide biosynthesis
-
-
PWY-6352
4-aminobutanoate degradation V
-
-
PWY-5022
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-tomatine degradation
-
-
PWY18C3-5
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
amygdalin and prunasin degradation
-
-
PWY-6011
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
arachidonate metabolites biosynthesis
-
-
PWY-8397
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
ascorbate glutathione cycle
-
-
PWY-2261
ascorbate recycling (cytosolic)
-
-
PWY-6370
atromentin biosynthesis
-
-
PWY-7518
avenanthramide biosynthesis
-
-
PWY-8157
bacterial bioluminescence
-
-
PWY-7723
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
beta-D-glucuronide and D-glucuronate degradation
-
-
PWY-7247
Bifidobacterium shunt
-
-
P124-PWY
bis(guanylyl molybdopterin) cofactor sulfurylation
-
-
PWY-8164
bryostatin biosynthesis
-
-
PWY-8047
bupropion degradation
-
-
PWY66-241
C20 prostanoid biosynthesis
-
-
PWY66-374
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
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-
CAMALEXIN-SYN
cellulose degradation II (fungi)
-
-
PWY-6788
ceramide and sphingolipid recycling and degradation (yeast)
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-
PWY-7119
ceramide degradation (generic)
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-
PWY-6483
chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
coenzyme M biosynthesis II
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-
PWY-6643
costunolide biosynthesis
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PWY-6540
coumarin biosynthesis (via 2-coumarate)
-
-
PWY-5176
creatine phosphate biosynthesis
-
-
PWY-6158
cytidylyl molybdenum cofactor sulfurylation
-
-
PWY-8165
D-arabinose degradation V
-
-
PWY-8334
D-galactose degradation IV
-
-
PWY-6693
delta-guaiene biosynthesis
-
-
PWY-6669
detoxification of reactive carbonyls in chloroplasts
-
-
PWY-6786
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
diethylphosphate degradation
-
-
PWY-5491
divinyl ether biosynthesis II
-
-
PWY-5409
dopamine degradation
-
-
PWY6666-2
ephedrine biosynthesis
-
-
PWY-5883
epoxysqualene biosynthesis
-
-
PWY-5670
ethanol degradation IV
-
-
PWY66-162
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis IV (engineered)
-
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PWY-7126
ethene biosynthesis V (engineered)
-
-
PWY-7124
fatty acid biosynthesis initiation (mitochondria)
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PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
-
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PWY-6799
fatty acid biosynthesis initiation (type I)
-
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PWY-5966-1
fatty acid biosynthesis initiation (type II)
-
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PWY-4381
Fe(II) oxidation
-
-
PWY-6692
firefly bioluminescence
-
-
PWY-7913
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
fructan biosynthesis
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PWY-822
fructan degradation
-
-
PWY-862
GABA shunt II
-
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PWY-8346
gamma-glutamyl cycle
-
-
PWY-4041
germacrene biosynthesis
-
-
PWY-5733
gliotoxin biosynthesis
-
-
PWY-7533
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
gossypol biosynthesis
-
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PWY-5773
heme degradation I
-
-
PWY-5874
heterolactic fermentation
-
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P122-PWY
homospermidine biosynthesis I
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PWY-5907
homospermidine biosynthesis II
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PWY-8149
hypoglycin biosynthesis
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PWY-5826
icosapentaenoate metabolites biosynthesis
-
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PWY-8399
incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis VI (bacteria)
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TRPIAACAT-PWY
inulin degradation
-
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PWY-8314
isoprene biosynthesis II (engineered)
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PWY-7391
jadomycin biosynthesis
-
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PWY-6679
jasmonic acid biosynthesis
-
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PWY-735
L-alanine biosynthesis II
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ALANINE-SYN2-PWY
L-alanine biosynthesis III
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PWY0-1021
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation III
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ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
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PWY-8188
L-arabinose degradation II
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PWY-5515
L-arginine degradation V (arginine deiminase pathway)
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ARGDEGRAD-PWY
L-arginine degradation XIII (reductive Stickland reaction)
-
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PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
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PWY-6344
L-ascorbate degradation II (bacterial, aerobic)
-
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PWY-6961
L-ascorbate degradation III
-
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PWY-6960
L-asparagine degradation III (mammalian)
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ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
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ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
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PWY-8294
L-glutamate biosynthesis IV
-
-
GLUGLNSYN-PWY
L-glutamate biosynthesis V
-
-
PWY-4341
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation II
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-
GLUTDEG-PWY
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
-
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PWY-8190
L-glutamine biosynthesis I
-
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GLNSYN-PWY
L-glutamine degradation II
-
-
GLUTAMINEFUM-PWY
L-histidine degradation V
-
-
PWY-5031
L-isoleucine biosynthesis I (from threonine)
-
-
ILEUSYN-PWY
L-isoleucine biosynthesis II
-
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PWY-5101
L-isoleucine biosynthesis III
-
-
PWY-5103
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
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PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
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PWY-8014
L-serine biosynthesis II
-
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PWY-8011
L-tryptophan degradation IV (via indole-3-lactate)
-
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TRPKYNCAT-PWY
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation XIII (reductive Stickland reaction)
-
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PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
L-valine biosynthesis
-
-
VALSYN-PWY
lacinilene C biosynthesis
-
-
PWY-5828
leukotriene biosynthesis
-
-
PWY66-375
linamarin degradation
-
-
PWY-3121
linoleate metabolites biosynthesis
-
-
PWY-8395
linustatin bioactivation
-
-
PWY-7091
lotaustralin degradation
-
-
PWY-6002
luteolin triglucuronide degradation
-
-
PWY-7445
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
manganese oxidation I
-
-
PWY-6591
mannitol degradation II
-
-
PWY-3861
melatonin degradation I
-
-
PWY-6398
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylaspartate cycle
methylglyoxal degradation III
-
-
PWY-5453
methylsalicylate degradation
-
-
PWY18C3-24
mevalonate pathway I (eukaryotes and bacteria)
-
-
PWY-922
mevalonate pathway II (haloarchaea)
-
-
PWY-6174
mevalonate pathway III (Thermoplasma)
-
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PWY-7524
mevalonate pathway IV (archaea)
-
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PWY-8125
mitochondrial L-carnitine shuttle
-
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PWY-6111
mixed acid fermentation
-
-
FERMENTATION-PWY
molybdopterin biosynthesis
-
-
PWY-6823
mupirocin biosynthesis
-
-
PWY-8012
mycobactin biosynthesis
-
-
PWY185E-1
NAD biosynthesis from nicotinamide
-
-
NAD-BIOSYNTHESIS-III
NAD salvage pathway V (PNC V cycle)
-
-
PWY3O-4107
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
neolinustatin bioactivation
-
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PWY-7092
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
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PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
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PWY-381
nitrate reduction VII (denitrification)
-
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PWY-6748
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
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PWY-7084
nitrite-dependent anaerobic methane oxidation
-
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PWY-6523
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
nitrogen remobilization from senescing leaves
-
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PWY-6549
nocardicin A biosynthesis
-
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PWY-7797
o-diquinones biosynthesis
-
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PWY-6752
oleandomycin activation/inactivation
-
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PWY-6972
oleate biosynthesis II (animals and fungi)
-
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PWY-5996
palmitoleate biosynthesis IV (fungi and animals)
-
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PWY3O-1801
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pectin degradation I
-
-
PWY-7246
pectin degradation II
-
-
PWY-7248
pederin biosynthesis
-
-
PWY-8049
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentose phosphate pathway (non-oxidative branch) I
-
-
NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
peptido-conjugates in tissue regeneration biosynthesis
-
-
PWY-8355
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phosphate acquisition
-
-
PWY-6348
phospholipases
-
-
LIPASYN-PWY
photosynthesis light reactions
-
-
PWY-101
phytate degradation I
-
-
PWY-4702
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
PWY1YI0-7
putrescine biosynthesis III
-
-
PWY-46
pyruvate fermentation to (R)-acetoin I
-
-
PWY-5938
pyruvate fermentation to (R)-acetoin II
-
-
PWY-5939
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-acetoin
-
-
PWY-6389
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
retinol biosynthesis
-
-
PWY-6857
rosmarinic acid biosynthesis I
-
-
PWY-5048
Rubisco shunt
-
-
PWY-5723
serotonin degradation
-
-
PWY-6313
sophorosyloxydocosanoate deacetylation
-
-
SOPHOROSYLOXYDOCOSANOATE-DEG-PWY
sorgoleone biosynthesis
-
-
PWY-5987
sphingolipid biosynthesis (plants)
-
-
PWY-5129
sphingosine and sphingosine-1-phosphate metabolism
-
-
PWY3DJ-11470
starch degradation I
-
-
PWY-842
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sulfolactate degradation III
-
-
PWY-6638
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of ornithine degradation
-
-
ORNDEG-PWY
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VIII (Chlamydia)
-
-
TCA-1
teichuronic acid biosynthesis (B. subtilis 168)
-
-
PWY-7820
thiazole component of thiamine diphosphate biosynthesis I
-
-
PWY-6892
thyroid hormone metabolism II (via conjugation and/or degradation)
-
-
PWY-6261
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
tRNA-uridine 2-thiolation and selenation (bacteria)
-
-
PWY-7892
UDP-N-acetyl-D-galactosamine biosynthesis I
-
-
PWY-5512
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
urea degradation II
-
-
PWY-5704
valencene and 7-epi-alpha-selinene biosynthesis
-
-
PWY-6291
vancomycin resistance I
-
-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
vitamin K-epoxide cycle
[2Fe-2S] iron-sulfur cluster biosynthesis
-
-
PWY-7250
methylaspartate cycle
-
-
PWY-6728
suberin monomers biosynthesis
-
-
PWY-1121
vitamin K-epoxide cycle
-
-
PWY-7999
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
208825, 488357, 489632, 489640, 489650, 654116, 656993, 660179, 660229, 663110, 670976, 682145, 682147, 685665, 700484, 705950, 716587, 756813
-
-
cv. Nausica and Arancha, highest enzyme activity at the beginning of the season
-
-
long enzyme form, mRNA; 2 isozymes encoded by 2 different genes
SwissProt
short enzyme form, mRNA; 2 isozymes encoded by 2 different genes
SwissProt
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
expression of the 1-SST gene can be observed in roots and leaves of stressed plants
-
after 1 month of growth the activity is twice as high as in N-rich plants
-
208825, 488353, 488355, 488357, 489632, 489640, 489646, 489650, 657033, 657039, 665872, 700484, 716587, 728554, 754295
-
in field-grown roots throughout autumn, highly expression in cold-induced roots and only low expression in forced roots
the onset of fructan synthesis coincides with the increase in 1-SST activity in roots. Expression of the 1-SST gene can be observed in roots and leaves of stressed plants
variable levels of FEHI expression in different phenotypes of the chicory cultivars. Roots from all cultivars show different expression level after five weeks storage time, but they are not significantly different
variable levels of FEHII expression in different phenotypes of the chicory cultivars. Roots from all cultivars show different expression level after five weeks storage time, but they are not significantly different
especially in outer tissue, highest expression level of the long isozyme
highest expression level of the short isozyme in outer and inner tissues
additional information
both isozymes are expressed in all tissues but in varying levels, overview
additional information
nearly no expression of the short isozyme in head leaves and in green leaves, both isozymes are expressed in all tissues but in varying levels, overview
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
additional information
additional information
-
the enzyme is unexpectedly related to cell-wall invertases, although a vacuolar localization is proposed
-
additional information
-
the enzyme is unexpectedly related to cell-wall invertases, although all other data suggest a vacuolar localization
-
LINKS TO OTHER DATABASES (specific for Cichorium intybus)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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