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Information on Organism Caenorhabditis elegans N2

Caenorhabditis elegans N2;

TaxTree of Organism Caenorhabditis elegans N2

Condensed Tree View

cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Opisthokonta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(kingdom)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

Protostomia can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(phylum)

Chromadorea can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Rhabditida can be found in Brenda

can be found in Brenda

BRENDA pathways

(order)

Rhabditina can be found in Brenda

can be found in Brenda

(suborder)

Rhabditomorpha can be found in Brenda

can be found in Brenda

(infraorder)

Rhabditoidea can be found in Brenda

can be found in Brenda

(superfamily)

Rhabditidae can be found in Brenda

can be found in Brenda

(family)

Peloderinae can be found in Brenda

can be found in Brenda

(subfamily)

Caenorhabditis can be found in Brenda

can be found in Brenda

BRENDA pathways

(genus)

Caenorhabditis elegans can be found in Brenda

can be found in Brenda

BRENDA pathways

(species)

Caenorhabditis elegans N2

can be found in Brenda

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(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)

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PWY-7726

(5Z)-dodecenoate biosynthesis II

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PWY-7858

(S)-lactate fermentation to propanoate, acetate and hydrogen

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PWY-8086

10-cis-heptadecenoyl-CoA degradation (yeast)

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PWY-7337

10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)

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PWY-7338

6-gingerol analog biosynthesis (engineered)

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PWY-6920

9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)

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PWY-7340

aerobic respiration I (cytochrome c)

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PWY-3781

aerobic respiration II (cytochrome c) (yeast)

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PWY-7279

aerobic respiration III (alternative oxidase pathway)

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PWY-4302

alanine metabolism

alanine metabolism

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Alanine, aspartate and glutamate metabolism

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alpha-Linolenic acid metabolism

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Amino sugar and nucleotide sugar metabolism

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anaerobic energy metabolism (invertebrates, mitochondrial)

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PWY-7384

beta-Alanine metabolism

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Biosynthesis of secondary metabolites

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Biosynthesis of unsaturated fatty acids

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Butanoate metabolism

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Carbon fixation pathways in prokaryotes

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ceramide and sphingolipid recycling and degradation (yeast)

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PWY-7119

ceramide degradation (generic)

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PWY-6483

chitin degradation I (archaea)

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PWY-6855

chitin degradation II (Vibrio)

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PWY-6902

chitin degradation III (Serratia)

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PWY-7822

chondroitin sulfate biosynthesis

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PWY-6567

Citrate cycle (TCA cycle)

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citric acid cycle

citric acid cycle

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crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)

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PWY-7854

D-Amino acid metabolism

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docosahexaenoate biosynthesis III (6-desaturase, mammals)

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PWY-7606

ethene biosynthesis III (microbes)

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PWY-6854

fatty acid beta-oxidation II (plant peroxisome)

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PWY-5136

fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)

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PWY-6837

fatty acid beta-oxidation VI (mammalian peroxisome)

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PWY66-391

fatty acid beta-oxidation VII (yeast peroxisome)

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PWY-7288

Fatty acid degradation

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Fe(II) oxidation

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PWY-6692

Galactose metabolism

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glycerol-3-phosphate to fumarate electron transfer

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PWY0-1582

Glycine, serine and threonine metabolism

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Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate

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Glycosaminoglycan degradation

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hydrogen to fumarate electron transfer

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PWY0-1576

incomplete reductive TCA cycle

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P42-PWY

jasmonic acid biosynthesis

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PWY-735

lipid metabolism

lipid metabolism

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Metabolic pathways

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methyl ketone biosynthesis (engineered)

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PWY-7007

methylaspartate cycle

Microbial metabolism in diverse environments

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mixed acid fermentation

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FERMENTATION-PWY

mycolyl-arabinogalactan-peptidoglycan complex biosynthesis

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PWY-6397

NAD(P)/NADPH interconversion

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PWY-5083

NADH to cytochrome bd oxidase electron transfer I

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PWY0-1334

NADH to cytochrome bo oxidase electron transfer I

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PWY0-1335

NADH to fumarate electron transfer

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PWY0-1336

non-pathway related

non-pathway related

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O-antigen building blocks biosynthesis (E. coli)

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OANTIGEN-PWY

O-Antigen nucleotide sugar biosynthesis

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oleate beta-oxidation (isomerase-dependent, yeast)

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PWY-7291

Oxidative phosphorylation

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oxidative phosphorylation

oxidative phosphorylation

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partial TCA cycle (obligate autotrophs)

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PWY-5913

phytochelatins biosynthesis

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PWY-6745

Propanoate metabolism

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propanoyl-CoA degradation II

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PWY-7574

propionate fermentation

propionate fermentation

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pyruvate fermentation to propanoate I

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P108-PWY

reactive oxygen species degradation

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DETOX1-PWY-1

reductive TCA cycle I

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P23-PWY

reductive TCA cycle II

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PWY-5392

serine metabolism

serine metabolism

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serine racemization

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PWY-8140

sphingolipid biosynthesis (plants)

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PWY-5129

Sphingolipid metabolism

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sphingosine and sphingosine-1-phosphate metabolism

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PWY3DJ-11470

sphingosine metabolism

sphingosine metabolism

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succinate to chytochrome c oxidase via cytochrome c6

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PWY1YI0-2

succinate to cytochrome bd oxidase electron transfer

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PWY0-1353

succinate to cytochrome bo oxidase electron transfer

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PWY0-1329

succinate to cytochrome c oxidase via plastocyanin

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PWY1YI0-3

succinate to plastoquinol oxidase

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PWY1YI0-8

sulfated glycosaminoglycan metabolism

sulfated glycosaminoglycan metabolism

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superoxide radicals degradation

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DETOX1-PWY

superpathway of glyoxylate cycle and fatty acid degradation

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PWY-561

superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis

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PWY-7328

TCA cycle I (prokaryotic)

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TCA

TCA cycle II (plants and fungi)

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PWY-5690

TCA cycle III (animals)

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PWY66-398

TCA cycle IV (2-oxoglutarate decarboxylase)

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P105-PWY

TCA cycle V (2-oxoglutarate synthase)

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PWY-6969

TCA cycle VI (Helicobacter)

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REDCITCYC

TCA cycle VII (acetate-producers)

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PWY-7254

TCA cycle VIII (Chlamydia)

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TCA-1

ubiquinol-10 biosynthesis (late decarboxylation)

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PWY-5872

ubiquinol-6 biosynthesis (late decarboxylation)

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PWY3O-19

ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)

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PWY-7230

ubiquinol-7 biosynthesis (late decarboxylation)

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PWY-5873

ubiquinol-8 biosynthesis (late decarboxylation)

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PWY-5870

ubiquinol-9 biosynthesis (late decarboxylation)

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PWY-5871

Ubiquinone and other terpenoid-quinone biosynthesis

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UDP-alpha-D-galactofuranose biosynthesis

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PWY-7622

vancomycin resistance II

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PWY-6455

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Caenorhabditis elegans N2

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body wall muscle

Caenorhabditis elegans N2

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0

Manually annotated by BRENDA team

gonadal sheath cell

Caenorhabditis elegans N2

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0

Manually annotated by BRENDA team

Caenorhabditis elegans N2

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0

Manually annotated by BRENDA team

show

show

Caenorhabditis elegans N2

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Manually annotated by BRENDA team

Caenorhabditis elegans N2

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Manually annotated by BRENDA team

Caenorhabditis elegans N2

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the msra-1 gene is expressed in most tissues, particularly in the nervous system

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Manually annotated by BRENDA team

Caenorhabditis elegans N2

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occasional expression in neurons

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Manually annotated by BRENDA team

pharyngeal muscle

Caenorhabditis elegans N2

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0

Manually annotated by BRENDA team

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Golgi apparatus

Caenorhabditis elegans N2

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the enzyme is localized to the trans-Golgi network

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Manually annotated by BRENDA team

mitochondrial membrane

Caenorhabditis elegans N2

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0

Manually annotated by BRENDA team

Caenorhabditis elegans N2

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0

Manually annotated by BRENDA team

Caenorhabditis elegans N2

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0

Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

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Release 2023.1 (January 2023)