Information on Organism Bacillus pumilus

TaxTree of Organism Bacillus pumilus
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EC NUMBER
COMMENTARY hide
deleted, the activty is included in EC 1.3.5.1, succinate dehydrogenase (quinone)
preliminary BRENDA-supplied EC number
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-propane-1,2-diol degradation
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3-methylbutanol biosynthesis (engineered)
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acetaldehyde biosynthesis I
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acetylene degradation (anaerobic)
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alpha-Linolenic acid metabolism
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Biosynthesis of secondary metabolites
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butanol and isobutanol biosynthesis (engineered)
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chitin degradation to ethanol
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Chloroalkane and chloroalkene degradation
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Drug metabolism - cytochrome P450
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ethanol degradation I
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ethanol degradation II
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ethanol fermentation
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ethanolamine utilization
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Fatty acid degradation
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Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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heterolactic fermentation
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L-isoleucine degradation II
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L-leucine degradation III
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L-methionine degradation III
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L-phenylalanine degradation III
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L-tryptophan degradation V (side chain pathway)
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L-tyrosine degradation III
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L-valine degradation II
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leucine metabolism
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Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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methionine metabolism
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Microbial metabolism in diverse environments
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mixed acid fermentation
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Naphthalene degradation
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noradrenaline and adrenaline degradation
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phenylalanine metabolism
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phenylethanol biosynthesis
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phytol degradation
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propanol degradation
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pyruvate fermentation to ethanol I
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pyruvate fermentation to ethanol II
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pyruvate fermentation to ethanol III
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pyruvate fermentation to isobutanol (engineered)
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Retinol metabolism
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salidroside biosynthesis
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serotonin degradation
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superpathway of fermentation (Chlamydomonas reinhardtii)
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Tyrosine metabolism
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tyrosine metabolism
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valine metabolism
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Caprolactam degradation
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detoxification of reactive carbonyls in chloroplasts
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ethylene glycol biosynthesis (engineered)
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Glycerolipid metabolism
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L-tryptophan degradation X (mammalian, via tryptamine)
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lipid metabolism
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Pentose and glucuronate interconversions
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pyruvate fermentation to butanol I
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traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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(S)-lactate fermentation to propanoate, acetate and hydrogen
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Bifidobacterium shunt
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Cysteine and methionine metabolism
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L-lactaldehyde degradation
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lactate fermentation
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Propanoate metabolism
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pyruvate fermentation to (S)-lactate
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Pyruvate metabolism
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superpathway of glucose and xylose degradation
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Entner-Doudoroff pathway I
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formaldehyde oxidation I
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Glutathione metabolism
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NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
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Pentose phosphate pathway
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pentose phosphate pathway
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pentose phosphate pathway (oxidative branch) I
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superpathway of glycolysis and the Entner-Doudoroff pathway
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Entner Doudoroff pathway
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Arachidonic acid metabolism
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arachidonic acid metabolism
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Folate biosynthesis
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adenosine nucleotides degradation I
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Drug metabolism - other enzymes
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guanosine ribonucleotides de novo biosynthesis
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inosine 5'-phosphate degradation
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Purine metabolism
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purine metabolism
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cholesterol degradation to androstenedione I (cholesterol oxidase)
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Steroid degradation
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Porphyrin and chlorophyll metabolism
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aerobic respiration I (cytochrome c)
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aerobic respiration II (cytochrome c) (yeast)
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aerobic respiration III (alternative oxidase pathway)
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Butanoate metabolism
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Carbon fixation pathways in prokaryotes
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Citrate cycle (TCA cycle)
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citric acid cycle
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methylaspartate cycle
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Oxidative phosphorylation
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propionate fermentation
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succinate to cytochrome bd oxidase electron transfer
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succinate to cytochrome bo oxidase electron transfer
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superpathway of glyoxylate cycle and fatty acid degradation
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TCA cycle I (prokaryotic)
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TCA cycle II (plants and fungi)
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TCA cycle III (animals)
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TCA cycle IV (2-oxoglutarate decarboxylase)
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TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
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TCA cycle VII (acetate-producers)
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4-aminobutanoate degradation V
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alanine metabolism
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Alanine, aspartate and glutamate metabolism
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Arginine biosynthesis
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ethylene biosynthesis IV (engineered)
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glutamate and glutamine metabolism
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L-alanine degradation II (to D-lactate)
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L-glutamate degradation I
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L-glutamate degradation V (via hydroxyglutarate)
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Nitrogen metabolism
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Taurine and hypotaurine metabolism
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D-Glutamine and D-glutamate metabolism
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GABA shunt
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L-glutamate biosynthesis II
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L-glutamate degradation X
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L-ornithine biosynthesis II
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Valine, leucine and isoleucine biosynthesis
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Valine, leucine and isoleucine degradation
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ammonia oxidation II (anaerobic)
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denitrification
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nitrate reduction I (denitrification)
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nitrate reduction VII (denitrification)
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nitrifier denitrification
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nitrite-dependent anaerobic methane oxidation
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Terpenoid backbone biosynthesis
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justicidin B biosynthesis
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matairesinol biosynthesis
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sesamin biosynthesis
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photosynthesis
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photosynthesis light reactions
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ethanol degradation IV
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Glyoxylate and dicarboxylate metabolism
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methanol oxidation to formaldehyde IV
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non-pathway related
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reactive oxygen species degradation
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superoxide radicals degradation
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Tryptophan metabolism
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baicalein degradation (hydrogen peroxide detoxification)
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betanidin degradation
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luteolin triglucuronide degradation
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Phenylpropanoid biosynthesis
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manganese oxidation I
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methane metabolism
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Phenylalanine metabolism
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hydrogen production
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hydrogen production III
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hydrogen production VI
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hydrogen production VIII
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L-glutamate degradation VII (to butanoate)
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3-chlorocatechol degradation
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Benzoate degradation
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catechol degradation to beta-ketoadipate
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Chlorocyclohexane and chlorobenzene degradation
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Fluorobenzoate degradation
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phenol degradation
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Toluene degradation
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2-nitrotoluene degradation
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catechol degradation to 2-hydroxypentadienoate I
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catechol degradation to 2-hydroxypentadienoate II
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Styrene degradation
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toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol)
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toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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Xylene degradation
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octane oxidation
Betalain biosynthesis
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firefly bioluminescence
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Isoquinoline alkaloid biosynthesis
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L-dopa and L-dopachrome biosynthesis
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pheomelanin biosynthesis
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Biosynthesis of unsaturated fatty acids
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oleate biosynthesis II (animals and fungi)
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sorgoleone biosynthesis
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(7Z,10Z,13Z)-hexadecatrienoate biosynthesis
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alpha-linolenate biosynthesis I (plants and red algae)
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glycolipid desaturation
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phospholipid desaturation
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C20 prostanoid biosynthesis
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ethylene biosynthesis III (microbes)
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caffeine degradation III (bacteria, via demethylation)
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Caffeine metabolism
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theophylline degradation
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Photosynthesis
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nitrate assimilation
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nitrogen fixation I (ferredoxin)
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arsenate detoxification I (mammalian)
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arsenate detoxification II (glutaredoxin)
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arsenite oxidation II (respiratory)
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L-methionine biosynthesis I
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L-methionine biosynthesis II (plants)
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L-methionine biosynthesis III
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S-adenosyl-L-methionine cycle I
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S-adenosyl-L-methionine cycle II
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seleno-amino acid biosynthesis (plants)
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Selenocompound metabolism
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Biosynthesis of ansamycins
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Calvin-Benson-Bassham cycle
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Carbon fixation in photosynthetic organisms
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formaldehyde assimilation II (assimilatory RuMP Cycle)
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formaldehyde assimilation III (dihydroxyacetone cycle)
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pentose phosphate pathway (non-oxidative branch)
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pentose phosphate pathway (partial)
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Rubisco shunt
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Cyanoamino acid metabolism
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gamma-glutamyl cycle
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glutathione metabolism
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hypoglycin biosynthesis
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leukotriene biosynthesis
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fructan biosynthesis
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Starch and sucrose metabolism
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ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
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Glycosphingolipid biosynthesis - lacto and neolacto series
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adenine and adenosine salvage I
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adenine and adenosine salvage III
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adenine and adenosine salvage V
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adenosine nucleotides degradation II
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fluoroacetate and fluorothreonine biosynthesis
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guanine and guanosine salvage
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guanosine nucleotides degradation III
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Nicotinate and nicotinamide metabolism
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nucleoside and nucleotide degradation (archaea)
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purine deoxyribonucleosides degradation I
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purine deoxyribonucleosides degradation II
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purine ribonucleosides degradation
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Pyrimidine metabolism
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salinosporamide A biosynthesis
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xanthine and xanthosine salvage
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4-hydroxy-2-nonenal detoxification
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camalexin biosynthesis
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gliotoxin biosynthesis
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glutathione-mediated detoxification I
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glutathione-mediated detoxification II
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indole glucosinolate activation (intact plant cell)
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pentachlorophenol degradation
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2'-deoxymugineic acid phytosiderophore biosynthesis
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L-nicotianamine biosynthesis
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homocysteine and cysteine interconversion
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L-cysteine biosynthesis VI (from L-methionine)
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Sulfur metabolism
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Amino sugar and nucleotide sugar metabolism
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CMP-legionaminate biosynthesis I
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UDP-GlcNAc biosynthesis
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UDP-N-acetyl-D-galactosamine biosynthesis III
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UDP-N-acetyl-D-glucosamine biosynthesis I
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UDP-N-acetyl-D-glucosamine biosynthesis II
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D-galactose degradation I (Leloir pathway)
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D-galactose detoxification
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degradation of hexoses
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Galactose metabolism
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stachyose degradation
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streptomycin biosynthesis
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Streptomycin biosynthesis
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1-butanol autotrophic biosynthesis (engineered)
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gluconeogenesis I
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gluconeogenesis III
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glycerol degradation to butanol
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glycolysis
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glycolysis I (from glucose 6-phosphate)
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glycolysis II (from fructose 6-phosphate)
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glycolysis III (from glucose)
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glycolysis IV (plant cytosol)
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sucrose biosynthesis I (from photosynthesis)
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adenosine ribonucleotides de novo biosynthesis
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Thiamine metabolism
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assimilatory sulfate reduction II
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assimilatory sulfate reduction III
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dissimilatory sulfate reduction I (to hydrogen sufide))
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dissimilatory sulfate reduction II (to thiosulfate)
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Monobactam biosynthesis
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selenate reduction
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sulfate activation for sulfonation
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sulfate reduction
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sulfite oxidation III
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poly(glycerol phosphate) wall teichoic acid biosynthesis
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teichoic acid biosynthesis
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methyl indole-3-acetate interconversion
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methylsalicylate degradation
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retinol biosynthesis
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superpathway of methylsalicylate metabolism
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triacylglycerol degradation
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sophorosyloxydocosanoate deacetylation
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Ascorbate and aldarate metabolism
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ascorbate metabolism
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Entner-Doudoroff pathway II (non-phosphorylative)
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Entner-Doudoroff pathway III (semi-phosphorylative)
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glucose and glucose-1-phosphate degradation
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glucose degradation (oxidative)
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L-ascorbate biosynthesis IV
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L-ascorbate biosynthesis VI (engineered pathway)
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sorbitol biosynthesis II
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Penicillin and cephalosporin biosynthesis
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diethylphosphate degradation
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sulfopterin metabolism
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Glycerophospholipid metabolism
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phosphatidylcholine resynthesis via glycerophosphocholine
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phospholipid remodeling (phosphatidylethanolamine, yeast)
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2-arachidonoylglycerol biosynthesis
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Ether lipid metabolism
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Inositol phosphate metabolism
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phospholipases
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plasmalogen biosynthesis
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plasmalogen degradation
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D-myo-inositol (1,4,5)-trisphosphate biosynthesis
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D-myo-inositol-5-phosphate metabolism
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phosphatidate metabolism, as a signaling molecule
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sphingolipid biosynthesis (mammals)
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Sphingolipid metabolism
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sphingomyelin metabolism
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anandamide biosynthesis I
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degradation of sugar alcohols
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glycerophosphodiester degradation
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tRNA processing
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glycogen metabolism
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starch degradation
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glycogen degradation II
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cellulose degradation
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cellulose degradation II (fungi)
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(1,4)-beta-D-xylan degradation
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cellulose and hemicellulose degradation (cellulolosome)
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d-xylose degradation
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chitin degradation I (archaea)
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chitin degradation II (Vibrio)
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chitin degradation III (Serratia)
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Other glycan degradation
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alpha-tomatine degradation
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coumarin biosynthesis (via 2-coumarate)
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ginsenoside metabolism
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linamarin degradation
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linustatin bioactivation
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lotaustralin degradation
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neolinustatin bioactivation
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Glycosphingolipid biosynthesis - globo and isoglobo series
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melibiose degradation
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metabolism of disaccharids
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Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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lactose degradation II
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xyloglucan degradation II (exoglucanase)
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d-mannose degradation
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sucrose degradation III (sucrose invertase)
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sucrose degradation V (sucrose alpha-glucosidase)
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rutin degradation (plants)
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degradation of pentoses
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pectin degradation II
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beta-(1,4)-mannan degradation
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Fructose and mannose metabolism
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fructan degradation
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agarose degradation
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porphyran degradation
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2,3-dihydroxybenzoate biosynthesis
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Biosynthesis of siderophore group nonribosomal peptides
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enterobactin biosynthesis
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2-methylpropene degradation
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poly-hydroxy fatty acids biosynthesis
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Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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peptidoglycan biosynthesis II (staphylococci)
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peptidoglycan biosynthesis IV (Enterococcus faecium)
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peptidoglycan maturation (meso-diaminopimelate containing)
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nocardicin A biosynthesis
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aspartate and asparagine metabolism
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L-asparagine degradation I
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L-asparagine degradation III (mammalian)
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superpathway of L-aspartate and L-asparagine biosynthesis
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acrylonitrile degradation I
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Aminobenzoate degradation
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Arginine and proline metabolism
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arginine metabolism
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degradation of aromatic, nitrogen containing compounds
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IAA biosynthesis
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indole-3-acetate biosynthesis II
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indole-3-acetate biosynthesis III (bacteria)
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indole-3-acetate biosynthesis IV (bacteria)
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L-arginine degradation X (arginine monooxygenase pathway)
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Atrazine degradation
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urea cycle
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urea degradation II
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Biotin metabolism
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anhydromuropeptides recycling I
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anhydromuropeptides recycling II
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indole glucosinolate activation (herbivore attack)
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indole-3-acetate biosynthesis V (bacteria and fungi)
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(aminomethyl)phosphonate degradation
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glyphosate degradation III
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L-tyrosine degradation I
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acetaldehyde biosynthesis II
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long chain fatty acid ester synthesis (engineered)
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pyruvate fermentation to acetate VIII
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pyruvate fermentation to acetoin III
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oxalate degradation V
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beta-Alanine metabolism
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L-glutamate degradation IV
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L-glutamate degradation IX (via 4-aminobutanoate)
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1,3-propanediol biosynthesis (engineered)
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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glycolysis V (Pyrococcus)
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Methane metabolism
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4-hydroxy-2(1H)-quinolone biosynthesis
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acridone alkaloid biosynthesis
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L-tryptophan biosynthesis
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Phenazine biosynthesis
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Phenylalanine, tyrosine and tryptophan biosynthesis
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tryptophan metabolism
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cysteine metabolism
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hydrogen sulfide biosynthesis II (mammalian)
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L-cysteine biosynthesis III (from L-homocysteine)
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cyanide detoxification II
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chondroitin sulfate degradation I (bacterial)
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
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glycogen biosynthesis III (from alpha-maltose 1-phosphate)
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trehalose biosynthesis IV
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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phosphopantothenate biosynthesis I
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bacilysin biosynthesis
Biosynthesis of various secondary metabolites - part 2
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L-asparagine biosynthesis I
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L-leucine degradation I
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arsenite oxidation I (respiratory)
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Fe(II) oxidation
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oxidative phosphorylation
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ATP biosynthesis
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
additional information
-
99% of binase is present outside of the cell and only below 1% is localized intracellularly
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Manually annotated by BRENDA team
LINKS TO OTHER DATABASES (specific for Bacillus pumilus)