Information on Organism Bacillus pumilus

TaxTree of Organism Bacillus pumilus
Condensed Tree View
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Bacilli can be found in Brenda BRENDA pathways(class)
Bacillus can be found in Brenda BRENDA pathways(genus)
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(1,4)-beta-D-xylan degradation
-
-
(7Z,10Z,13Z)-hexadecatrienoate biosynthesis
-
-
(aminomethyl)phosphonate degradation
-
-
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
(S)-propane-1,2-diol degradation
-
-
(S)-reticuline biosynthesis
-
-
1,3-propanediol biosynthesis (engineered)
-
-
1-butanol autotrophic biosynthesis (engineered)
-
-
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
2,3-dihydroxybenzoate biosynthesis
-
-
2-arachidonoylglycerol biosynthesis
-
-
2-methylpropene degradation
-
-
2-nitrotoluene degradation
-
-
3-chlorocatechol degradation
-
-
3-methylbutanol biosynthesis (engineered)
-
-
3-phosphoinositide biosynthesis
-
-
4-aminobutanoate degradation V
-
-
4-hydroxy-2(1H)-quinolone biosynthesis
-
-
4-hydroxy-2-nonenal detoxification
-
-
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
-
-
ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
-
-
acetaldehyde biosynthesis I
-
-
acetaldehyde biosynthesis II
-
-
acetylene degradation (anaerobic)
-
-
acridone alkaloid biosynthesis
-
-
acrylonitrile degradation I
-
-
adenine and adenosine salvage I
-
-
adenine and adenosine salvage III
-
-
adenine and adenosine salvage V
-
-
adenosine nucleotides degradation I
-
-
adenosine nucleotides degradation II
-
-
adenosine ribonucleotides de novo biosynthesis
-
-
aerobic respiration I (cytochrome c)
-
-
aerobic respiration II (cytochrome c) (yeast)
-
-
aerobic respiration III (alternative oxidase pathway)
-
-
agarose degradation
-
-
alanine metabolism
-
-
Alanine, aspartate and glutamate metabolism
-
-
alpha-linolenate biosynthesis I (plants and red algae)
-
-
alpha-Linolenic acid metabolism
-
-
alpha-tomatine degradation
-
-
Amino sugar and nucleotide sugar metabolism
-
-
Aminobenzoate degradation
-
-
ammonia oxidation II (anaerobic)
-
-
anandamide biosynthesis I
-
-
anhydromuropeptides recycling I
-
-
anhydromuropeptides recycling II
-
-
Arachidonic acid metabolism
-
-
arachidonic acid metabolism
-
-
Arginine and proline metabolism
-
-
Arginine biosynthesis
-
-
arginine metabolism
-
-
arsenate detoxification I
-
-
arsenate detoxification III
-
-
arsenic detoxification (mammals)
-
-
arsenic detoxification (plants)
-
-
arsenic detoxification (yeast)
-
-
arsenite to oxygen electron transfer
-
-
arsenite to oxygen electron transfer (via azurin)
-
-
Ascorbate and aldarate metabolism
-
-
ascorbate metabolism
-
-
aspartate and asparagine metabolism
-
-
assimilatory sulfate reduction II
-
-
assimilatory sulfate reduction III
-
-
assimilatory sulfate reduction IV
-
-
ATP biosynthesis
-
-
Atrazine degradation
-
-
bacilysin biosynthesis
Benzoate degradation
-
-
beta-(1,4)-mannan degradation
-
-
beta-Alanine metabolism
-
-
Betalain biosynthesis
-
-
Bifidobacterium shunt
-
-
Biosynthesis of 12-, 14- and 16-membered macrolides
-
-
Biosynthesis of ansamycins
-
-
Biosynthesis of secondary metabolites
-
-
Biosynthesis of siderophore group nonribosomal peptides
-
-
Biosynthesis of unsaturated fatty acids
-
-
Biosynthesis of various secondary metabolites - part 2
-
-
Biotin metabolism
-
-
Butanoate metabolism
-
-
butanol and isobutanol biosynthesis (engineered)
-
-
C20 prostanoid biosynthesis
-
-
caffeine degradation III (bacteria, via demethylation)
-
-
Caffeine metabolism
-
-
Calvin-Benson-Bassham cycle
-
-
camalexin biosynthesis
-
-
Caprolactam degradation
-
-
Carbon fixation in photosynthetic organisms
-
-
Carbon fixation pathways in prokaryotes
-
-
Carotenoid biosynthesis
-
-
carotenoid biosynthesis
-
-
catechol degradation to 2-hydroxypentadienoate I
-
-
catechol degradation to 2-hydroxypentadienoate II
-
-
catechol degradation to beta-ketoadipate
-
-
cellulose and hemicellulose degradation (cellulolosome)
-
-
cellulose degradation
-
-
cellulose degradation II (fungi)
-
-
chitin deacetylation
-
-
chitin degradation I (archaea)
-
-
chitin degradation II (Vibrio)
-
-
chitin degradation III (Serratia)
-
-
Chloroalkane and chloroalkene degradation
-
-
Chlorocyclohexane and chlorobenzene degradation
-
-
cholesterol biosynthesis
-
-
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
Citrate cycle (TCA cycle)
-
-
citric acid cycle
-
-
CMP-legionaminate biosynthesis I
-
-
coumarin biosynthesis (via 2-coumarate)
-
-
cyanide detoxification II
-
-
Cyanoamino acid metabolism
-
-
Cysteine and methionine metabolism
-
-
cysteine metabolism
-
-
cytosolic NADPH production (yeast)
-
-
D-Amino acid metabolism
-
-
D-galactose degradation I (Leloir pathway)
-
-
D-galactose degradation IV
-
-
D-galactose detoxification
-
-
d-mannose degradation
-
-
D-myo-inositol (1,4,5)-trisphosphate biosynthesis
-
-
D-myo-inositol-5-phosphate metabolism
-
-
d-xylose degradation
-
-
D-xylose degradation to ethylene glycol (engineered)
-
-
degradation of aromatic, nitrogen containing compounds
-
-
degradation of hexoses
-
-
degradation of pentoses
-
-
degradation of sugar alcohols
-
-
denitrification
-
-
detoxification of reactive carbonyls in chloroplasts
-
-
diethylphosphate degradation
-
-
dissimilatory sulfate reduction I (to hydrogen sufide))
-
-
Drug metabolism - cytochrome P450
-
-
Drug metabolism - other enzymes
-
-
dTMP de novo biosynthesis (mitochondrial)
-
-
enterobactin biosynthesis
-
-
Entner Doudoroff pathway
-
-
Entner-Doudoroff pathway I
-
-
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
erythromycin D biosynthesis
-
-
ethanol degradation I
-
-
ethanol degradation II
-
-
ethanol degradation IV
-
-
ethanol fermentation
-
-
ethanolamine utilization
-
-
ethene biosynthesis III (microbes)
-
-
ethene biosynthesis IV (engineered)
-
-
Ether lipid metabolism
-
-
Fatty acid degradation
-
-
Fe(II) oxidation
-
-
firefly bioluminescence
-
-
fluoroacetate and fluorothreonine biosynthesis
-
-
Fluorobenzoate degradation
-
-
Folate biosynthesis
-
-
folate transformations II (plants)
-
-
folate transformations III (E. coli)
-
-
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
formaldehyde oxidation I
-
-
fructan biosynthesis
-
-
fructan degradation
-
-
Fructose and mannose metabolism
-
-
GABA shunt
-
-
Galactose metabolism
-
-
gamma-glutamyl cycle
-
-
ginsenoside metabolism
-
-
gliotoxin biosynthesis
-
-
gluconeogenesis I
-
-
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
gluconeogenesis III
-
-
glucose and glucose-1-phosphate degradation
-
-
glucose degradation (oxidative)
-
-
glutamate and glutamine metabolism
-
-
Glutathione metabolism
-
-
glutathione metabolism
-
-
glutathione-mediated detoxification I
-
-
glutathione-mediated detoxification II
-
-
glycerol degradation to butanol
-
-
Glycerolipid metabolism
-
-
glycerophosphodiester degradation
-
-
Glycerophospholipid metabolism
-
-
Glycine, serine and threonine metabolism
-
-
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
glycogen degradation II
-
-
glycogen metabolism
-
-
glycolipid desaturation
-
-
glycolysis
-
-
Glycolysis / Gluconeogenesis
-
-
glycolysis I (from glucose 6-phosphate)
-
-
glycolysis II (from fructose 6-phosphate)
-
-
glycolysis III (from glucose)
-
-
glycolysis IV
-
-
glycolysis V (Pyrococcus)
-
-
Glycosaminoglycan degradation
-
-
Glycosphingolipid biosynthesis - ganglio series
-
-
Glycosphingolipid biosynthesis - globo and isoglobo series
-
-
Glycosphingolipid biosynthesis - lacto and neolacto series
-
-
Glyoxylate and dicarboxylate metabolism
-
-
glyphosate degradation III
-
-
gossypol biosynthesis
-
-
guanine and guanosine salvage I
-
-
guanosine nucleotides degradation III
-
-
guanosine ribonucleotides de novo biosynthesis
-
-
heterolactic fermentation
-
-
homocysteine and cysteine interconversion
-
-
hydrogen sulfide biosynthesis II (mammalian)
-
-
hypoglycin biosynthesis
-
-
IAA biosynthesis
-
-
indole glucosinolate activation (herbivore attack)
-
-
indole glucosinolate activation (intact plant cell)
-
-
indole-3-acetate biosynthesis II
-
-
indole-3-acetate biosynthesis III (bacteria)
-
-
indole-3-acetate biosynthesis IV (bacteria)
-
-
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
inosine 5'-phosphate degradation
-
-
Inositol phosphate metabolism
-
-
inulin degradation
-
-
isoprene biosynthesis II (engineered)
-
-
isoprenoid biosynthesis
-
-
Isoquinoline alkaloid biosynthesis
-
-
justicidin B biosynthesis
-
-
L-alanine degradation II (to D-lactate)
-
-
L-arabinose degradation II
-
-
L-arginine degradation X (arginine monooxygenase pathway)
-
-
L-ascorbate biosynthesis IV (animals, D-glucuronate pathway)
-
-
L-ascorbate biosynthesis VI (plants, myo-inositol pathway)
-
-
L-ascorbate biosynthesis VIII (engineered pathway)
-
-
L-asparagine biosynthesis I
-
-
L-asparagine degradation I
-
-
L-asparagine degradation III (mammalian)
-
-
L-cysteine biosynthesis III (from L-homocysteine)
-
-
L-dopa and L-dopachrome biosynthesis
-
-
L-glutamate biosynthesis II
-
-
L-glutamate degradation I
-
-
L-glutamate degradation IX (via 4-aminobutanoate)
-
-
L-glutamate degradation V (via hydroxyglutarate)
-
-
L-glutamate degradation X
-
-
L-glutamate degradation XI (reductive Stickland reaction)
-
-
L-histidine degradation V
-
-
L-isoleucine degradation II
-
-
L-lactaldehyde degradation
-
-
L-leucine degradation I
-
-
L-leucine degradation III
-
-
L-methionine biosynthesis I
-
-
L-methionine biosynthesis II
-
-
L-methionine biosynthesis III
-
-
L-methionine degradation III
-
-
L-nicotianamine biosynthesis
-
-
L-ornithine biosynthesis II
-
-
L-phenylalanine degradation III
-
-
L-tryptophan biosynthesis
-
-
L-tryptophan degradation V (side chain pathway)
-
-
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
L-tyrosine degradation I
-
-
L-tyrosine degradation III
-
-
L-valine degradation II
-
-
lactate fermentation
-
-
lactose degradation II
-
-
leucine metabolism
-
-
leukotriene biosynthesis
-
-
linamarin degradation
-
-
linustatin bioactivation
-
-
lipid metabolism
-
-
long chain fatty acid ester synthesis (engineered)
-
-
lotaustralin degradation
-
-
macrolide antibiotic biosynthesis
-
-
manganese oxidation I
-
-
matairesinol biosynthesis
-
-
melibiose degradation
-
-
Metabolic pathways
-
-
metabolism of disaccharids
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methane metabolism
-
-
methanol oxidation to formaldehyde IV
-
-
methionine metabolism
-
-
methyl indole-3-acetate interconversion
-
-
methylaspartate cycle
methylglyoxal degradation III
-
-
methylsalicylate degradation
-
-
mevalonate metabolism
-
-
mevalonate pathway I (eukaryotes and bacteria)
-
-
mevalonate pathway II (haloarchaea)
-
-
mevalonate pathway III (Thermoplasma)
-
-
mevalonate pathway IV (archaea)
-
-
Microbial metabolism in diverse environments
-
-
mixed acid fermentation
-
-
Monobactam biosynthesis
-
-
NAD metabolism
-
-
NADPH to cytochrome c oxidase via plastocyanin
-
-
Naphthalene degradation
-
-
neolinustatin bioactivation
-
-
Nicotinate and nicotinamide metabolism
-
-
nitrate assimilation
-
-
nitrate reduction I (denitrification)
-
-
nitrate reduction VII (denitrification)
-
-
nitrifier denitrification
-
-
nitrite-dependent anaerobic methane oxidation
-
-
nitrogen fixation I (ferredoxin)
-
-
Nitrogen metabolism
-
-
nocardicin A biosynthesis
-
-
non-pathway related
-
-
noradrenaline and adrenaline degradation
-
-
nucleoside and nucleotide degradation (archaea)
-
-
octane oxidation
oleate biosynthesis II (animals and fungi)
-
-
One carbon pool by folate
-
-
Other glycan degradation
-
-
oxalate degradation V
-
-
Oxidative phosphorylation
-
-
oxidative phosphorylation
-
-
palmitoleate biosynthesis IV (fungi and animals)
-
-
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
partial TCA cycle (obligate autotrophs)
-
-
pectin degradation II
-
-
Penicillin and cephalosporin biosynthesis
-
-
pentachlorophenol degradation
-
-
Pentose and glucuronate interconversions
-
-
Pentose phosphate pathway
-
-
pentose phosphate pathway
-
-
pentose phosphate pathway (non-oxidative branch) I
-
-
pentose phosphate pathway (non-oxidative branch) II
-
-
pentose phosphate pathway (oxidative branch) I
-
-
pentose phosphate pathway (partial)
-
-
Peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis
-
-
peptidoglycan biosynthesis II (staphylococci)
-
-
peptidoglycan biosynthesis III (mycobacteria)
-
-
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
peptidoglycan biosynthesis V (beta-lactam resistance)
-
-
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
Phenazine biosynthesis
-
-
phenol degradation
-
-
Phenylalanine metabolism
-
-
phenylalanine metabolism
-
-
Phenylalanine, tyrosine and tryptophan biosynthesis
-
-
phenylethanol biosynthesis
-
-
Phenylpropanoid biosynthesis
-
-
pheomelanin biosynthesis
-
-
phosphate acquisition
-
-
phosphatidate metabolism, as a signaling molecule
-
-
phosphatidylcholine resynthesis via glycerophosphocholine
-
-
phospholipases
-
-
phospholipid desaturation
-
-
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
phosphopantothenate biosynthesis I
-
-
Photosynthesis
-
-
photosynthesis
-
-
photosynthesis light reactions
-
-
phytate degradation I
-
-
phytochromobilin biosynthesis
-
-
phytol degradation
-
-
plasmalogen biosynthesis
-
-
plasmalogen degradation
-
-
poly(glycerol phosphate) wall teichoic acid biosynthesis
-
-
poly-hydroxy fatty acids biosynthesis
-
-
porphyran degradation
-
-
Porphyrin and chlorophyll metabolism
-
-
Propanoate metabolism
-
-
propanol degradation
-
-
propionate fermentation
-
-
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
purine deoxyribonucleosides degradation I
-
-
purine deoxyribonucleosides degradation II
-
-
Purine metabolism
-
-
purine metabolism
-
-
purine ribonucleosides degradation
-
-
pyrimidine deoxyribonucleosides salvage
-
-
pyrimidine deoxyribonucleotides biosynthesis from CTP
-
-
pyrimidine deoxyribonucleotides de novo biosynthesis I
-
-
pyrimidine deoxyribonucleotides de novo biosynthesis II
-
-
pyrimidine deoxyribonucleotides de novo biosynthesis IV
-
-
Pyrimidine metabolism
-
-
pyrimidine metabolism
-
-
pyruvate fermentation to (S)-lactate
-
-
pyruvate fermentation to acetate VIII
-
-
pyruvate fermentation to acetoin III
-
-
pyruvate fermentation to butanol I
-
-
pyruvate fermentation to ethanol I
-
-
pyruvate fermentation to ethanol II
-
-
pyruvate fermentation to ethanol III
-
-
pyruvate fermentation to isobutanol (engineered)
-
-
Pyruvate metabolism
-
-
reactive oxygen species degradation
-
-
retinol biosynthesis
-
-
Retinol metabolism
-
-
Riboflavin metabolism
-
-
Rubisco shunt
-
-
rutin degradation (plants)
-
-
S-adenosyl-L-methionine salvage I
-
-
S-adenosyl-L-methionine salvage II
-
-
saframycin A biosynthesis
-
-
salidroside biosynthesis
-
-
salinosporamide A biosynthesis
-
-
sedoheptulose bisphosphate bypass
-
-
selenate reduction
-
-
seleno-amino acid biosynthesis (plants)
-
-
Selenocompound metabolism
-
-
serotonin degradation
-
-
serotonin metabolism
-
-
sesamin biosynthesis
-
-
Sesquiterpenoid and triterpenoid biosynthesis
-
-
sophorosyloxydocosanoate deacetylation
-
-
sorbitol biosynthesis II
-
-
sorgoleone biosynthesis
-
-
sphingolipid biosynthesis (mammals)
-
-
Sphingolipid metabolism
-
-
sphingomyelin metabolism
-
-
stachyose degradation
-
-
Starch and sucrose metabolism
-
-
starch degradation
-
-
Steroid biosynthesis
-
-
Steroid degradation
-
-
Steroid hormone biosynthesis
-
-
streptomycin biosynthesis
-
-
Streptomycin biosynthesis
-
-
Styrene degradation
-
-
succinate to chytochrome c oxidase via cytochrome c6
-
-
succinate to cytochrome bd oxidase electron transfer
-
-
succinate to cytochrome bo oxidase electron transfer
-
-
succinate to cytochrome c oxidase via plastocyanin
-
-
succinate to plastoquinol oxidase
-
-
sucrose biosynthesis I (from photosynthesis)
-
-
sucrose degradation III (sucrose invertase)
-
-
sucrose degradation V (sucrose alpha-glucosidase)
-
-
sulfate activation for sulfonation
-
-
sulfate reduction
-
-
sulfite oxidation III
-
-
sulfopterin metabolism
-
-
Sulfur metabolism
-
-
superoxide radicals degradation
-
-
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
superpathway of glucose and xylose degradation
-
-
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
superpathway of glyoxylate cycle and fatty acid degradation
-
-
superpathway of L-aspartate and L-asparagine biosynthesis
-
-
superpathway of methylsalicylate metabolism
-
-
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
-
-
Taurine and hypotaurine metabolism
-
-
TCA cycle I (prokaryotic)
-
-
TCA cycle II (plants and fungi)
-
-
TCA cycle III (animals)
-
-
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
TCA cycle V (2-oxoglutarate synthase)
-
-
TCA cycle VII (acetate-producers)
-
-
TCA cycle VIII (Chlamydia)
-
-
teichoic acid biosynthesis
-
-
Terpenoid backbone biosynthesis
-
-
tetrahydrofolate biosynthesis I
-
-
tetrahydrofolate metabolism
-
-
theophylline degradation
-
-
Thiamine metabolism
-
-
Toluene degradation
-
-
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
trehalose biosynthesis IV
-
-
triacylglycerol degradation
-
-
tRNA processing
-
-
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
UDP-GlcNAc biosynthesis
-
-
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
-
-
UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
-
-
urea cycle
-
-
urea degradation II
-
-
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
-
-
Valine, leucine and isoleucine degradation
-
-
vitamin B1 metabolism
-
-
xanthine and xanthosine salvage
-
-
Xylene degradation
-
-
xyloglucan degradation II (exoglucanase)
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
additional information
-
99% of binase is present outside of the cell and only below 1% is localized intracellularly
-
Manually annotated by BRENDA team
LINKS TO OTHER DATABASES (specific for Bacillus pumilus)