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Word Map for Organism Auxenochlorella protothecoides
- Auxenochlorella protothecoides
- lutein
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microalgal
- wickerhamii
- prototheca
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oleaginous
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photoautotrophic
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mixotrophy
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photobioreactor
TaxTree of Organism Auxenochlorella protothecoides
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EC NUMBER 
COMMENTARY 
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,3-propanediol biosynthesis (engineered)
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PWY-7385
2-oxoglutarate decarboxylation to succinyl-CoA
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PWY-5084
2-oxoisovalerate decarboxylation to isobutanoyl-CoA
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PWY-5046
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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CHLOROPHYLL-SYN
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
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PWY-5531
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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PWY-7159
4-aminobutanoate degradation V
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PWY-5022
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alpha-carotene biosynthesis
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PWY-5946
ammonia assimilation cycle I
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PWY-6963
ammonia assimilation cycle II
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PWY-6964
ammonia assimilation cycle III
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AMMASSIM-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
assimilatory sulfate reduction II
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SULFMETII-PWY
assimilatory sulfate reduction III
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PWY-6683
assimilatory sulfate reduction IV
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PWY1ZNC-1
beta-carotene biosynthesis
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PWY-5943
Bifidobacterium shunt
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P124-PWY
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
Calvin-Benson-Bassham cycle
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CALVIN-PWY
cellulose degradation II (fungi)
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PWY-6788
chitin deacetylation
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PWY-7118
chlorobactene biosynthesis
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PWY-7939
chlorophyll a degradation I
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PWY-5098
chlorophyll a degradation II
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PWY-6927
chlorophyll a degradation III
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PWY-7164
CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
cutin biosynthesis
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PWY-321
cyclic electron flow
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PWY-8270
cytosolic NADPH production (yeast)
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PWY-7268
diacylglycerol and triacylglycerol biosynthesis
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TRIGLSYN-PWY
dissimilatory sulfate reduction I (to hydrogen sufide))
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DISSULFRED-PWY
Entner-Doudoroff pathway I
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PWY-8004
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis IV (engineered)
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PWY-7126
ethene biosynthesis V (engineered)
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PWY-7124
flexixanthin biosynthesis
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PWY-7947
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
formaldehyde oxidation I
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RUMP-PWY
GDP-alpha-D-glucose biosynthesis
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PWY-5661
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glucose and glucose-1-phosphate degradation
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GLUCOSE1PMETAB-PWY
glycerol-3-phosphate to fumarate electron transfer
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PWY0-1582
glycine biosynthesis II
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GLYCINE-SYN2-PWY
glycine cleavage
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GLYCLEAV-PWY
glycogen degradation I
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GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
hydrogen to fumarate electron transfer
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PWY0-1576
incomplete reductive TCA cycle
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P42-PWY
isorenieratene biosynthesis I (actinobacteria)
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PWY-7938
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-aspartate degradation II (aerobic)
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PWY-8291
L-aspartate degradation III (anaerobic)
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PWY-8294
L-carnitine degradation II
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PWY-3641
L-glutamate degradation I
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GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-glutamine biosynthesis I
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GLNSYN-PWY
L-glutamine degradation II
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GLUTAMINEFUM-PWY
L-malate degradation II
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PWY-7686
lactucaxanthin biosynthesis
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PWY-5175
lutein biosynthesis
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PWY-5947
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
Methanobacterium thermoautotrophicum biosynthetic metabolism
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PWY-6146
methylaspartate cycle
mixed acid fermentation
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FERMENTATION-PWY
mRNA capping I
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PWY-7375
myxol-2' fucoside biosynthesis
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PWY-6279
NADH to fumarate electron transfer
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PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
nitrogen remobilization from senescing leaves
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PWY-6549
nucleoside and nucleotide degradation (archaea)
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PWY-5532
okenone biosynthesis
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PWY-7591
partial TCA cycle (obligate autotrophs)
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PWY-5913
pentose phosphate pathway (non-oxidative branch) I
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NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
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PWY-8178
pentose phosphate pathway (oxidative branch) I
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OXIDATIVEPENT-PWY
pentose phosphate pathway (partial)
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P21-PWY
photosynthesis light reactions
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PWY-101
protective electron sinks in the thylakoid membrane (PSII to PTOX)
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PWY1YI0-7
pyruvate decarboxylation to acetyl CoA I
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PYRUVDEHYD-PWY
pyruvate fermentation to propanoate I
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P108-PWY
reactive oxygen species degradation
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DETOX1-PWY-1
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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PWY-6857
Rubisco shunt
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PWY-5723
selenate reduction
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PWY-6932
starch degradation II
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PWY-6724
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
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PWY0-1353
succinate to cytochrome bo oxidase electron transfer
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PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
succinate to plastoquinol oxidase
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PWY1YI0-8
sucrose biosynthesis II
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PWY-7238
sucrose degradation III (sucrose invertase)
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PWY-621
sulfate activation for sulfonation
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PWY-5340
sulfite oxidation III
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PWY-5278
superoxide radicals degradation
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DETOX1-PWY
superpathway of glycolysis and the Entner-Doudoroff pathway
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GLYCOLYSIS-E-D
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
TCA cycle VIII (Chlamydia)
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TCA-1
thioredoxin pathway
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THIOREDOX-PWY
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
trehalose degradation I (low osmolarity)
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TREDEGLOW-PWY
trehalose degradation II (cytosolic)
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PWY0-1182
trehalose degradation IV
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PWY-2722
trehalose degradation V
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PWY-2723
triacylglycerol degradation
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LIPAS-PWY
UDP-N-acetyl-D-galactosamine biosynthesis II
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PWY-5514
UDP-N-acetyl-D-glucosamine biosynthesis II
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UDPNACETYLGALSYN-PWY
vernolate biosynthesis III
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PWY-6917
methylaspartate cycle
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PWY-6728
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
enzyme components protein L, protein N and protein B are all transcribed constitutively independent of illumination and presence of glucose. Steady-state amounts of proteins in the light-grown cells are two- to threefold greater than in dark-grown cells. Approximately the same amount of protein is present in cultures grown mixtrophically or heterotrophically both containing glucose. Much less protein is present in photoautotrophic cells. Therefore light-independent enzyme activity depends on post-transcriptional and post-translational regulation and switches on both in light and dark
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subunit B, subunit L, and subunit N; strain CS-41, also named Auxenochlorella protothecoides strain CS-41
UniProt
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
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in Chlorella, the release of red pigments is correlated with the loss of chlorophyll only if the cells are kept in the dark. These pigments are neither produced in light-grown cells nor in the dark if a source of nitrogen is provided
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Auxenochlorella protothecoides)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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