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Information on Organism Arabidopsis sp.

Arabidopsis sp.;

Word Map for Organism Arabidopsis sp.

Arabidopsis sp.
bell
pumilus
mottle
sphaericus
cucumber
whitefly
kuang
damping-off
cayenne
muskmelon
ethylene
amyloliquefaciens
mycoides
watermelon
pasteurii
cucurbit
leaf-spotting
cytochemical
crown-rotting
loblolly

TaxTree of Organism Arabidopsis sp.

Condensed Tree View

cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Viridiplantae can be found in Brenda

can be found in Brenda

BRENDA pathways

(kingdom)

Streptophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Streptophytina can be found in Brenda

can be found in Brenda

(subphylum)

Embryophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Tracheophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Euphyllophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Spermatophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Magnoliopsida can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Mesangiospermae can be found in Brenda

can be found in Brenda

(clade)

eudicotyledons can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Gunneridae can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Pentapetalae can be found in Brenda

can be found in Brenda

(clade)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

Brassicales can be found in Brenda

can be found in Brenda

BRENDA pathways

(order)

Brassicaceae can be found in Brenda

can be found in Brenda

BRENDA pathways

(family)

Camelineae can be found in Brenda

can be found in Brenda

(tribe)

Arabidopsis can be found in Brenda

can be found in Brenda

BRENDA pathways

(genus)

unclassified Arabidopsis can be found in Brenda

can be found in Brenda

Arabidopsis sp.

can be found in Brenda

BRENDA pathways

(species)

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preliminary BRENDA-supplied EC number

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(5Z)-dodecenoate biosynthesis I

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PWY0-862

(5Z)-dodecenoate biosynthesis II

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PWY-7858

1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)

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PWY-6362

3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)

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CHLOROPHYLL-SYN

3-phosphoinositide biosynthesis

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PWY-6352

4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II

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PWY-7282

4-aminobutanoate degradation I

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PWY-6535

4-aminobutanoate degradation IV

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PWY-6473

8-amino-7-oxononanoate biosynthesis I

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PWY-6519

abscisic acid biosynthesis

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PWY-695

acetyl-CoA biosynthesis from citrate

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PWY-5172

Aflatoxin biosynthesis

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alanine metabolism

alanine metabolism

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Alanine, aspartate and glutamate metabolism

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alpha-Linolenic acid metabolism

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Amino sugar and nucleotide sugar metabolism

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anteiso-branched-chain fatty acid biosynthesis

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PWY-8173

Arginine and proline metabolism

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arginine dependent acid resistance

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PWY0-1299

arginine metabolism

arginine metabolism

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Ascorbate and aldarate metabolism

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ascorbate metabolism

ascorbate metabolism

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ascorbate recycling (cytosolic)

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PWY-6370

assimilatory sulfate reduction II

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SULFMETII-PWY

assimilatory sulfate reduction III

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PWY-6683

assimilatory sulfate reduction IV

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PWY1ZNC-1

beta-Alanine metabolism

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Biosynthesis of secondary metabolites

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Biosynthesis of unsaturated fatty acids

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Biotin metabolism

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Butanoate metabolism

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Calvin-Benson-Bassham cycle

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CALVIN-PWY

calystegine biosynthesis

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PWY-5318

Carbon fixation in photosynthetic organisms

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Carbon fixation pathways in prokaryotes

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Carotenoid biosynthesis

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carotenoid biosynthesis

carotenoid biosynthesis

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cellulose biosynthesis

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PWY-1001

chlorophyll a degradation I

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PWY-5098

chlorophyll a degradation II

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PWY-6927

chlorophyll metabolism

chlorophyll metabolism

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choline biosynthesis I

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PWY-3385

choline biosynthesis III

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PWY-3561

cis-vaccenate biosynthesis

Citrate cycle (TCA cycle)

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citric acid cycle

citric acid cycle

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CMP-3-deoxy-D-manno-octulosonate biosynthesis

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PWY-1269

CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis

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PWY-7674

CMP-KDO biosynthesis

CMP-KDO biosynthesis

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CO2 fixation in Crenarchaeota

CO2 fixation in Crenarchaeota

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cyclic electron flow

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PWY-8270

Cysteine and methionine metabolism

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cysteine metabolism

cysteine metabolism

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D-myo-inositol (1,3,4)-trisphosphate biosynthesis

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PWY-6364

D-myo-inositol (1,4,5)-trisphosphate biosynthesis

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PWY-6351

D-myo-inositol (1,4,5)-trisphosphate degradation

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PWY-6363

dimethylsulfoniopropanoate biosynthesis I (Wollastonia)

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PWY-6054

dimethylsulfoniopropanoate biosynthesis II (Spartina)

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PWY-6055

dissimilatory sulfate reduction I (to hydrogen sufide))

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DISSULFRED-PWY

Diterpenoid biosynthesis

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Drug metabolism - other enzymes

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ergothioneine biosynthesis I (bacteria)

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PWY-7255

ethene biosynthesis I (plants)

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ETHYL-PWY

Ether lipid metabolism

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even iso-branched-chain fatty acid biosynthesis

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PWY-8175

Fatty acid biosynthesis

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fatty acid biosynthesis initiation (mitochondria)

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PWY66-429

fatty acid biosynthesis initiation (type I)

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PWY-5966-1

fatty acid elongation -- saturated

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FASYN-ELONG-PWY

folate transformations I

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PWY-2201

formaldehyde oxidation

formaldehyde oxidation

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formaldehyde oxidation II (glutathione-dependent)

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PWY-1801

fructose 2,6-bisphosphate biosynthesis

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PWY66-423

Fructose and mannose metabolism

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GABA shunt I

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GLUDEG-I-PWY

GABA shunt II

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PWY-8346

gala-series glycosphingolipids biosynthesis

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PWY-7840

galactolipid biosynthesis I

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PWY-401

galactolipid biosynthesis II

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PWY-7666

Galactose metabolism

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gibberellin biosynthesis III (early C-13 hydroxylation)

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PWY-5035

gibberellin inactivation I (2beta-hydroxylation)

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PWY-102

Glucosinolate biosynthesis

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glutamate and glutamine metabolism

glutamate and glutamine metabolism

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glutathione biosynthesis

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GLUTATHIONESYN-PWY

Glutathione metabolism

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glutathione metabolism

glutathione metabolism

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Glycerolipid metabolism

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Glycerophospholipid metabolism

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glycine betaine biosynthesis

glycine betaine biosynthesis

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Glycine, serine and threonine metabolism

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glycogen biosynthesis I (from ADP-D-Glucose)

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GLYCOGENSYNTH-PWY

glycogen degradation I

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GLYCOCAT-PWY

glycogen metabolism

glycogen metabolism

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Glyoxylate and dicarboxylate metabolism

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gondoate biosynthesis (anaerobic)

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PWY-7663

heme degradation I

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PWY-5874

heme metabolism

heme metabolism

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Histidine metabolism

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histidine metabolism

histidine metabolism

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homoglutathione biosynthesis

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PWY-6840

indole-3-acetate inactivation IX

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PWY-1741

Inositol phosphate metabolism

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isoleucine metabolism

isoleucine metabolism

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jadomycin biosynthesis

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PWY-6679

jasmonic acid biosynthesis

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PWY-735

L-alanine biosynthesis I

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ALANINE-VALINESYN-PWY

L-arginine degradation III (arginine decarboxylase/agmatinase pathway)

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PWY0-823

L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)

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ARGDEG-III-PWY

L-ascorbate degradation II (bacterial, aerobic)

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PWY-6961

L-ascorbate degradation III

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PWY-6960

L-cysteine biosynthesis I

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CYSTSYN-PWY

L-glutamate degradation IX (via 4-aminobutanoate)

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PWY0-1305

L-histidine biosynthesis

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HISTSYN-PWY

L-isoleucine biosynthesis I (from threonine)

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ILEUSYN-PWY

L-isoleucine biosynthesis II

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PWY-5101

L-isoleucine biosynthesis III

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PWY-5103

L-isoleucine biosynthesis IV

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PWY-5104

L-isoleucine biosynthesis V

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PWY-5108

L-isoleucine degradation I

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ILEUDEG-PWY

L-isoleucine degradation II

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PWY-5078

L-isoleucine degradation III (oxidative Stickland reaction)

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PWY-8184

L-leucine biosynthesis

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LEUSYN-PWY

L-leucine degradation I

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LEU-DEG2-PWY

L-leucine degradation III

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PWY-5076

L-leucine degradation IV (reductive Stickland reaction)

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PWY-7767

L-leucine degradation V (oxidative Stickland reaction)

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PWY-8185

L-lysine degradation XI

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LYSINE-DEG1-PWY

L-methionine degradation I (to L-homocysteine)

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METHIONINE-DEG1-PWY

L-methionine salvage cycle II (plants)

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PWY-7270

L-phenylalanine degradation IV (mammalian, via side chain)

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PWY-6318

L-threonine biosynthesis

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HOMOSER-THRESYN-PWY

L-tyrosine degradation I

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TYRFUMCAT-PWY

L-valine biosynthesis

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VALSYN-PWY

L-valine degradation I

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VALDEG-PWY

L-valine degradation II

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PWY-5057

L-valine degradation III (oxidative Stickland reaction)

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PWY-8183

leucine metabolism

leucine metabolism

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lipid metabolism

lipid metabolism

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Lipopolysaccharide biosynthesis

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Lysine degradation

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lysine metabolism

lysine metabolism

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Metabolic pathways

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metabolism of disaccharids

metabolism of disaccharids

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Methane metabolism

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methionine metabolism

methionine metabolism

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methylglyoxal degradation

methylglyoxal degradation

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methylglyoxal degradation I

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PWY-5386

methylglyoxal degradation VIII

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PWY-5386-1

Microbial metabolism in diverse environments

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Monobactam biosynthesis

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mycolate biosynthesis

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PWYG-321

N-methylpyrrolidone degradation

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PWY-7978

NAD metabolism

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NAD salvage (plants)

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PWY-5381

NAD salvage pathway I (PNC VI cycle)

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PYRIDNUCSAL-PWY

NAD salvage pathway II (PNC IV cycle)

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PWY-7761

NAD salvage pathway III (to nicotinamide riboside)

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NAD-BIOSYNTHESIS-II

NADPH to cytochrome c oxidase via plastocyanin

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PWY-8271

Nicotinate and nicotinamide metabolism

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non-pathway related

non-pathway related

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nucleoside and nucleotide degradation (archaea)

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PWY-5532

octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)

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PWY-7388

odd iso-branched-chain fatty acid biosynthesis

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PWY-8174

oleate biosynthesis II (animals and fungi)

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PWY-5996

oleate biosynthesis IV (anaerobic)

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PWY-7664

One carbon pool by folate

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ophthalmate biosynthesis

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PWY-8043

palmitate biosynthesis II (type II fatty acid synthase)

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PWY-5971

palmitate biosynthesis III

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PWY-8279

palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)

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PWY-6282

palmitoleate biosynthesis IV (fungi and animals)

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PWY3O-1801

Pantothenate and CoA biosynthesis

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petroselinate biosynthesis

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PWY-5367

phenolic malonylglucosides biosynthesis

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PWY-6930

Phenylalanine metabolism

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Phenylpropanoid biosynthesis

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phosphatidate metabolism, as a signaling molecule

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PWY-7039

phosphatidylcholine biosynthesis II

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PWY4FS-2

phosphatidylcholine biosynthesis III

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PWY4FS-3

phosphatidylcholine biosynthesis IV

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PWY4FS-4

phospholipases

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LIPASYN-PWY

Photosynthesis

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photosynthesis

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photosynthesis light reactions

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PWY-101

plastoquinol-9 biosynthesis I

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PWY-1581

polyamine pathway

polyamine pathway

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Porphyrin and chlorophyll metabolism

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proline metabolism

proline metabolism

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Propanoate metabolism

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protein S-nitrosylation and denitrosylation

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PWY-7798

Purine metabolism

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purine metabolism

purine metabolism

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putrescine biosynthesis I

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PWY-40

putrescine biosynthesis II

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PWY-43

pyridoxal 5'-phosphate salvage I

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PLPSAL-PWY

pyridoxal 5'-phosphate salvage II (plants)

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PWY-7204

Pyrimidine metabolism

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pyrimidine metabolism

pyrimidine metabolism

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Pyruvate metabolism

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reductive TCA cycle I

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P23-PWY

Rubisco shunt

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PWY-5723

S-adenosyl-L-methionine salvage II

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PWY-5041

S-methyl-L-methionine cycle

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PWY-5441

selenate reduction

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PWY-6932

seleno-amino acid biosynthesis (plants)

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PWY-6936

seleno-amino acid detoxification and volatilization I

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PWY-6931

seleno-amino acid detoxification and volatilization II

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PWY-6935

Selenocompound metabolism

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sinapate ester biosynthesis

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PWY-3301

sorgoleone biosynthesis

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PWY-5987

spermidine biosynthesis III

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PWY-6834

Starch and sucrose metabolism

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starch biosynthesis

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PWY-622

starch degradation

starch degradation

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starch degradation I

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PWY-842

starch degradation II

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PWY-6724

streptorubin B biosynthesis

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PWY1A0-6120

succinate to chytochrome c oxidase via cytochrome c6

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PWY1YI0-2

succinate to cytochrome c oxidase via plastocyanin

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PWY1YI0-3

sulfate activation for sulfonation

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PWY-5340

sulfate reduction

sulfate reduction

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sulfide oxidation IV (mitochondria)

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PWY-7927

sulfite oxidation II

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PWY-5279

sulfite oxidation III

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PWY-5278

sulfite oxidation IV (sulfite oxidase)

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PWY-5326

sulfolipid biosynthesis

sulfolipid biosynthesis

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sulfoquinovosyl diacylglycerol biosynthesis

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PWYQT-4427

Sulfur metabolism

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superpathway of fatty acid biosynthesis initiation

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FASYN-INITIAL-PWY

superpathway of indole-3-acetate conjugate biosynthesis

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PWY-1782

Taurine and hypotaurine metabolism

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tetrahydrofolate metabolism

tetrahydrofolate metabolism

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thioredoxin pathway

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THIOREDOX-PWY

threonine metabolism

threonine metabolism

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thymine degradation

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PWY-6430

trehalose degradation II (cytosolic)

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PWY0-1182

trehalose degradation VI (periplasmic)

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PWY0-1466

Tropane, piperidine and pyridine alkaloid biosynthesis

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Tyrosine metabolism

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tyrosine metabolism

tyrosine metabolism

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Ubiquinone and other terpenoid-quinone biosynthesis

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uracil degradation I (reductive)

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PWY-3982

valine metabolism

valine metabolism

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Valine, leucine and isoleucine biosynthesis

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Valine, leucine and isoleucine degradation

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Vitamin B6 metabolism

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vitamin B6 metabolism

vitamin B6 metabolism

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vitamin E biosynthesis (tocopherols)

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PWY-1422

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Arabidopsis sp.

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Arabidopsis sp.

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high activity

Manually annotated by BRENDA team

Arabidopsis sp.

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Manually annotated by BRENDA team

cell suspension culture

Arabidopsis sp.

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Manually annotated by BRENDA team

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Arabidopsis sp.

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Manually annotated by BRENDA team

show

Arabidopsis sp.

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-

Manually annotated by BRENDA team

show

show

Arabidopsis sp.

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during dark adaption PDH expression is significantly enhanced

Manually annotated by BRENDA team

show

show

Arabidopsis sp.

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vegetative tissue

Manually annotated by BRENDA team

additional information

Arabidopsis sp.

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leaf anti-oxidative system, antisense suppression of 2-cysteine peroxiredoxin does not enhances activity

Manually annotated by BRENDA team

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Arabidopsis sp.

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Manually annotated by BRENDA team

show

Arabidopsis sp.

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isoenzyme A

Manually annotated by BRENDA team

show

Arabidopsis sp.

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-

Manually annotated by BRENDA team

show

show

Arabidopsis sp.

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Manually annotated by BRENDA team

plasma membrane

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show

Arabidopsis sp.

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recombinant beta-UP expressed in Escherichia coli BL21

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Manually annotated by BRENDA team

Arabidopsis sp.

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Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.

Release 2023.1 (January 2023)