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Organism related
Word Map for Organism Agrobacterium sp.
- Agrobacterium sp.
- amidohydrolase
- curdlan
- epsps
- roundup
-
5-enolpyruvylshikimate-3-phosphate
-
salecan
-
glyphosate-tolerant
-
n-carbamyl-d-amino
TaxTree of Organism Agrobacterium sp.
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EC NUMBER 
COMMENTARY 
-
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
(5Z)-dodecenoate biosynthesis II
-
-
PWY-7858
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1,3-beta-D-glucan biosynthesis
-
-
PWY-6773
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,4-dichlorobenzene degradation
-
-
14DICHLORBENZDEG-PWY
1,5-anhydrofructose degradation
-
-
PWY-6992
1-methylpyrrolinium biosynthesis
-
-
PWY-5315
2,4,5-trichlorophenoxyacetate degradation
-
-
PWY-6200
2,4,6-trichlorophenol degradation
-
-
PWY-6178
2-chloroacrylate degradation I
-
-
PWY-7425
2-nitrotoluene degradation
-
-
PWY-5641
3,4,6-trichlorocatechol degradation
-
-
PWY-6094
3,5-dichlorocatechol degradation
-
-
PWY-6084
3-chlorocatechol degradation I (ortho)
-
-
PWY-6089
3-chlorocatechol degradation II (ortho)
-
-
PWY-6193
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
4,5-dichlorocatechol degradation
-
-
PWY-6093
4-aminophenol degradation
-
-
PWY-7081
4-chlorocatechol degradation
-
-
PWY-6087
4-hydroxyacetophenone degradation
-
-
PWY-7002
4-nitrophenol degradation I
-
-
PWY-5487
4-nitrophenol degradation II
-
-
PWY-5488
4-sulfocatechol degradation
-
-
PWY-6041
8-amino-7-oxononanoate biosynthesis I
-
-
PWY-6519
8-amino-7-oxononanoate biosynthesis IV
-
-
PWY-8203
acetaldehyde biosynthesis I
-
-
PWY-6333
acetaldehyde biosynthesis II
-
-
PWY-6330
acetylene degradation (anaerobic)
-
-
P161-PWY
acrylonitrile degradation I
-
-
PWY-7308
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
aldoxime degradation
-
-
P345-PWY
alpha-tomatine degradation
-
-
PWY18C3-5
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
amygdalin and prunasin degradation
-
-
PWY-6011
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
anteiso-branched-chain fatty acid biosynthesis
-
-
PWY-8173
arsenic detoxification (mammals)
-
-
PWY-4202
avenanthramide biosynthesis
-
-
PWY-8157
bacterial bioluminescence
-
-
PWY-7723
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
beta-alanine biosynthesis I
-
-
PWY-3981
beta-D-glucuronide and D-glucuronate degradation
-
-
PWY-7247
betanidin degradation
-
-
PWY-5461
Bifidobacterium shunt
-
-
P124-PWY
butachlor degradation
-
-
PWY-7771
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
carbaryl degradation
-
-
PWY-8111
carbofuran degradation I
-
-
PWY-8286
carbofuran degradation II
-
-
PWY-8287
carbofuran degradation III
-
-
PWY-8288
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
catechol degradation to beta-ketoadipate
-
-
CATECHOL-ORTHO-CLEAVAGE-PWY
CDP-6-deoxy-D-gulose biosynthesis
-
-
PWY-8139
cellulose biosynthesis
-
-
PWY-1001
cellulose degradation II (fungi)
-
-
PWY-6788
chitin biosynthesis
-
-
PWY-6981
chlorinated phenols degradation
-
-
PWY-6197
chlorosalicylate degradation
-
-
PWY-6107
chlorpyrifos degradation
-
-
PWY-8065
chorismate biosynthesis from 3-dehydroquinate
-
-
PWY-6163
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
cis-vaccenate biosynthesis
colanic acid building blocks biosynthesis
-
-
COLANSYN-PWY
coumarin biosynthesis (via 2-coumarate)
-
-
PWY-5176
creatine phosphate biosynthesis
-
-
PWY-6158
D-carnitine degradation I
-
-
PWY-7471
D-carnitine degradation II
-
-
PWY-7472
D-galactose degradation I (Leloir pathway)
-
-
PWY-6317
D-galactose detoxification
-
-
PWY-3821
D-lactate to cytochrome bo oxidase electron transfer
-
-
PWY0-1565
D-sorbitol biosynthesis I
-
-
PWY-5054
degradation of aromatic, nitrogen containing compounds
-
-
diethylphosphate degradation
-
-
PWY-5491
dTDP-beta-L-rhamnose biosynthesis
-
-
DTDPRHAMSYN-PWY
ephedrine biosynthesis
-
-
PWY-5883
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis III (microbes)
-
-
PWY-6854
even iso-branched-chain fatty acid biosynthesis
-
-
PWY-8175
fatty acid elongation -- saturated
-
-
FASYN-ELONG-PWY
Fe(II) oxidation
-
-
PWY-6692
firefly bioluminescence
-
-
PWY-7913
fluoroacetate and fluorothreonine biosynthesis
-
-
PWY-6644
fluoroacetate degradation
-
-
PWY-6646
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde oxidation I
-
-
RUMP-PWY
fructan degradation
-
-
PWY-862
gamma-hexachlorocyclohexane degradation
-
-
GAMMAHEXCHLORDEG-PWY
gamma-resorcylate degradation I
-
-
PWY-7773
gamma-resorcylate degradation II
-
-
PWY-7772
GDP-alpha-D-glucose biosynthesis
-
-
PWY-5661
GDP-mannose biosynthesis
-
-
PWY-5659
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucose and glucose-1-phosphate degradation
-
-
GLUCOSE1PMETAB-PWY
glucosylglycerol biosynthesis
-
-
PWY-7902
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
-
-
PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
-
-
PWY0-1582
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
GLYCOGENSYNTH-PWY
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
glyphosate degradation I
-
-
PWY-7804
gondoate biosynthesis (anaerobic)
-
-
PWY-7663
gossypol biosynthesis
-
-
PWY-5773
guanine and guanosine salvage I
-
-
PWY-6620
guanosine nucleotides degradation III
-
-
PWY-6608
heterolactic fermentation
-
-
P122-PWY
histamine degradation
-
-
PWY-6181
hydrogen to fumarate electron transfer
-
-
PWY0-1576
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
PWY-5026
inosine 5'-phosphate degradation
-
-
PWY-5695
inulin degradation
-
-
PWY-8314
justicidin B biosynthesis
-
-
PWY-6824
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-carnitine degradation III
-
-
PWY-3602
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-lysine degradation V
-
-
PWY-5283
L-methionine degradation III
-
-
PWY-5082
L-phenylalanine degradation III
-
-
PWY-5079
L-serine biosynthesis II
-
-
PWY-8011
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
linamarin degradation
-
-
PWY-3121
linustatin bioactivation
-
-
PWY-7091
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
lotaustralin degradation
-
-
PWY-6002
luteolin triglucuronide degradation
-
-
PWY-7445
matairesinol biosynthesis
-
-
PWY-5466
melibiose degradation
-
-
PWY0-1301
methanol oxidation to carbon dioxide
-
-
PWY-7616
methanol oxidation to formaldehyde II
-
-
PWY-6510
methyl indole-3-acetate interconversion
-
-
PWY-6303
methyl parathion degradation
-
-
PWY-5489
methylaspartate cycle
methylsalicylate degradation
-
-
PWY-6184, PWY18C3-24
mixed acid fermentation
-
-
FERMENTATION-PWY
mucin core 3 and core 4 O-glycosylation
-
-
PWY-7435
mycolate biosynthesis
-
-
PWYG-321
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
-
-
PWY-6397
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
-
-
PWY0-1567
NADH to fumarate electron transfer
-
-
PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
neolinustatin bioactivation
-
-
PWY-7092
nicotinate degradation III
-
-
PWY-5055
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction IV (dissimilatory)
-
-
PWY-5674
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
odd iso-branched-chain fatty acid biosynthesis
-
-
PWY-8174
oleate biosynthesis IV (anaerobic)
-
-
PWY-7664
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
-
-
PWY-6282
paraoxon degradation
-
-
PWY-5490
parathion degradation
-
-
PARATHION-DEGRADATION-PWY
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pentachlorophenol degradation
-
-
PCPDEG-PWY
phenol degradation I (aerobic)
-
-
PWY-5418
phenylethanol biosynthesis
-
-
PWY-5751
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phosalacine biosynthesis
-
-
PWY-7769
phosphatidylserine and phosphatidylethanolamine biosynthesis I
-
-
PWY-5669
phosphinothricin tripeptide biosynthesis
-
-
PWY-6322
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
phosphopantothenate biosynthesis III (archaea)
-
-
PWY-6654
photosynthesis light reactions
-
-
PWY-101
phytol degradation
-
-
PWY66-389
pinoresinol degradation
-
-
PWY-7982
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
protocatechuate degradation II (ortho-cleavage pathway)
-
-
PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
purine ribonucleosides degradation
-
-
PWY0-1296
pyrimidine nucleobases salvage I
-
-
PWY-7183
pyruvate fermentation to acetate VIII
-
-
PWY-5768
pyruvate fermentation to acetoin III
-
-
PWY3O-440
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
pyruvate to cytochrome bo oxidase electron transfer
-
-
PWY-7544
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
resorcinol degradation
resveratrol biosynthesis
-
-
PWY-84
retinol biosynthesis
-
-
PWY-6857
rosmarinic acid biosynthesis I
-
-
PWY-5048
salicylate degradation I
-
-
PWY-6183
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
serotonin degradation
-
-
PWY-6313
sesamin biosynthesis
-
-
PWY-5469
stachyose degradation
-
-
PWY-6527
starch biosynthesis
-
-
PWY-622
starch degradation III
-
-
PWY-6731
starch degradation V
-
-
PWY-6737
stearate biosynthesis II (bacteria and plants)
-
-
PWY-5989
streptomycin biosynthesis
-
-
PWY-5940
streptorubin B biosynthesis
-
-
PWY1A0-6120
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
-
PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of phospholipid biosynthesis II (plants)
-
-
PHOSLIPSYN2-PWY
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
-
-
PWY-7328
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
teichuronic acid biosynthesis (B. subtilis 168)
-
-
PWY-7820
thymine degradation
-
-
PWY-6430
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
trehalose degradation V
-
-
PWY-2723
type I lipoteichoic acid biosynthesis (S. aureus)
-
-
PWY-7817
UDP-alpha-D-galactose biosynthesis
-
-
PWY-7344
UDP-alpha-D-glucose biosynthesis
-
-
PWY-7343
UDP-alpha-D-glucuronate biosynthesis (from UDP-glucose)
-
-
PWY-7346
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
UMP biosynthesis I
-
-
PWY-5686
UMP biosynthesis II
-
-
PWY-7790
UMP biosynthesis III
-
-
PWY-7791
uracil degradation I (reductive)
-
-
PWY-3982
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xanthommatin biosynthesis
-
-
PWY-8249
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
cis-vaccenate biosynthesis
-
-
PWY-5973
methylaspartate cycle
-
-
PWY-6728
resorcinol degradation
-
-
P343-PWY
suberin monomers biosynthesis
-
-
PWY-1121
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
9587, 9588, 9589, 31893, 31896, 31897, 31898, 31900, 172066, 208351, 209290, 209296, 209297, 209298, 209300, 209301, 209303, 209305, 210654, 285734, 285738, 289293, 657376, 657616, 667850, 696848, 719572
-
-
DSM 8888, D-carnitine- and L-carnitine dehydrogenases are induced by D-carnitine and L-carnitine respectively
-
-
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
-
inner membrane of both Escherichia coli or Agrobacterium sp., integral membrane protein
: 
