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Information on Organism Desulfovibrio vulgaris str. Hildenborough

Synonyms:
Desulfovibrio vulgaris ATCC 29579; Desulfovibrio vulgaris Hildenborough; Desulfovibrio vulgaris (STRAIN HILDENBOROUGH); Desulfovibrio vulgaris str. Hildenborough; Desulfovibrio vulgaris subsp. vulgaris ATCC 29579; Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough); Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough; Desulfovibrio vulgaris vulgaris (strain Hildenborough);
Word Map for Organism Desulfovibrio vulgaris str. Hildenborough
TaxTree of Organism Desulfovibrio vulgaris str. Hildenborough
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cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
delta/epsilon subdivisions can be found in Brenda (subphylum)
Deltaproteobacteria can be found in Brenda BRENDA pathways(class)
Desulfovibrionales can be found in Brenda BRENDA pathways(order)
Desulfovibrionaceae can be found in Brenda BRENDA pathways(family)
Desulfovibrio can be found in Brenda BRENDA pathways(genus)
Desulfovibrio vulgaris can be found in Brenda BRENDA pathways(species)
Desulfovibrio vulgaris str. Hildenborough can be found in Brenda BRENDA pathways(strain)
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EC NUMBER
COMMENTARY hide
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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CHLOROPHYLL-SYN
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
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PWY-5531
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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PWY-7159
3-methylbutanol biosynthesis (engineered)
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PWY-6871
acetaldehyde biosynthesis I
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PWY-6333
acetate fermentation
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acetylene degradation (anaerobic)
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P161-PWY
adenosine ribonucleotides de novo biosynthesis
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PWY-7219
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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alpha-Linolenic acid metabolism
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ammonia oxidation II (anaerobic)
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P303-PWY
arsenite to oxygen electron transfer
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PWY-4521
arsenite to oxygen electron transfer (via azurin)
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PWY-7429
assimilatory sulfate reduction I
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SO4ASSIM-PWY
assimilatory sulfate reduction II
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SULFMETII-PWY
assimilatory sulfate reduction III
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PWY-6683
assimilatory sulfate reduction IV
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PWY1ZNC-1
ATP biosynthesis
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PWY-7980
baicalein degradation (hydrogen peroxide detoxification)
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PWY-7214
betanidin degradation
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PWY-5461
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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bis(tungstenpterin) cofactor biosynthesis
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PWY-8167
Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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carbon tetrachloride degradation II
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PWY-5372
Chloroalkane and chloroalkene degradation
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Citrate cycle (TCA cycle)
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citric acid cycle
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coenzyme B/coenzyme M regeneration I (methanophenazine-dependent)
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PWY-5207
coenzyme M biosynthesis
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Cysteine and methionine metabolism
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D-lactate to cytochrome bo oxidase electron transfer
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PWY0-1565
denitrification
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diethylphosphate degradation
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PWY-5491
dissimilatory sulfate reduction I (to hydrogen sufide))
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DISSULFRED-PWY
Drug metabolism - cytochrome P450
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Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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PWY66-162
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
ethene biosynthesis III (microbes)
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PWY-6854
Fatty acid degradation
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Fe(II) oxidation
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PWY-6692
Folate biosynthesis
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formate oxidation to CO2
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PWY-1881
formate to nitrite electron transfer
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PWY0-1585
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
Glutathione metabolism
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glycerol-3-phosphate to cytochrome bo oxidase electron transfer
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PWY0-1561
Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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heme b biosynthesis I (aerobic)
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HEME-BIOSYNTHESIS-II
heme b biosynthesis II (oxygen-independent)
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HEMESYN2-PWY
heme b biosynthesis IV (Gram-positive bacteria)
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PWY-7766
heme b biosynthesis V (aerobic)
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HEME-BIOSYNTHESIS-II-1
heme metabolism
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heterolactic fermentation
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P122-PWY
hydrogen oxidation I (aerobic)
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P283-PWY
hydrogen oxidation II (aerobic, NAD)
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PWY-5382
hydrogen oxidation III (anaerobic, NADP)
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PWY-6512
hydrogen production
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hydrogen production I
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PWY-6744
hydrogen production II
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PWY-6758
hydrogen production III
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PWY-6759
hydrogen production IV
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PWY-6765
hydrogen production VI
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PWY-6780
hydrogen production VIII
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PWY-6785
incomplete reductive TCA cycle
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P42-PWY
isopropanol biosynthesis (engineered)
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PWY-6876
justicidin B biosynthesis
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PWY-6824
L-alanine degradation IV
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PWY1-2
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-glutamate degradation VII (to butanoate)
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GLUDEG-II-PWY
L-histidine degradation V
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PWY-5031
L-isoleucine degradation II
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PWY-5078
L-lactaldehyde degradation
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L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
lactate fermentation
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lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
leucine metabolism
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lipoprotein posttranslational modification
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PWY-7884
luteolin triglucuronide degradation
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PWY-7445
matairesinol biosynthesis
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PWY-5466
Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methanogenesis from acetate
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METH-ACETATE-PWY
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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methylglyoxal degradation V
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PWY-5458
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
molybdenum cofactor biosynthesis
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PWY-8171
NAD(P)/NADPH interconversion
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PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
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PWY0-1567
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
Naphthalene degradation
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nitrate assimilation
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nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrate reduction IV (dissimilatory)
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PWY-5674
nitrate reduction VII (denitrification)
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PWY-6748
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
Nitrogen metabolism
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Nitrotoluene degradation
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non-pathway related
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noradrenaline and adrenaline degradation
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PWY-6342
oxalate degradation III
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PWY-6696
oxalate degradation VI
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PWY-7985
Oxidative phosphorylation
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oxidative phosphorylation
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partial TCA cycle (obligate autotrophs)
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PWY-5913
Penicillin and cephalosporin biosynthesis
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phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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phenylethanol biosynthesis
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PWY-5751
Phenylpropanoid biosynthesis
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Photosynthesis
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photosynthesis
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photosynthesis light reactions
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PWY-101
phytol degradation
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PWY66-389
Porphyrin and chlorophyll metabolism
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Porphyrin metabolism
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proline to cytochrome bo oxidase electron transfer
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PWY0-1544
Propanoate metabolism
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propanol degradation
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Purine metabolism
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purine metabolism
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purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
Pyrimidine metabolism
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pyrimidine metabolism
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pyrimidine nucleobases salvage I
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PWY-7183
pyruvate decarboxylation to acetyl CoA III
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PWY-8275
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to acetate I
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P142-PWY
pyruvate fermentation to acetate III
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PWY-5483
pyruvate fermentation to acetate VI
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PWY-5538
pyruvate fermentation to acetate VII
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PWY-5600
pyruvate fermentation to acetone
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PWY-6588
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to hexanol (engineered)
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PWY-6863
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
Pyruvate metabolism
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pyruvate to cytochrome bo oxidase electron transfer
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PWY-7544
reactive oxygen species degradation
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DETOX1-PWY-1
reductive acetyl coenzyme A pathway
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reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
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CODH-PWY
reductive glycine pathway of autotrophic CO2 fixation
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PWY-8303
reductive monocarboxylic acid cycle
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PWY-5493
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
Retinol metabolism
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salidroside biosynthesis
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PWY-6802
selenate reduction
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PWY-6932
serotonin degradation
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PWY-6313
serotonin metabolism
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sesamin biosynthesis
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PWY-5469
succinate to chytochrome c oxidase via cytochrome c6
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PWY1YI0-2
succinate to cytochrome bo oxidase electron transfer
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PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
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PWY1YI0-3
sulfate reduction
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sulfite oxidation II
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PWY-5279
sulfite oxidation III
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PWY-5278
sulfopterin metabolism
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Sulfur metabolism
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sulfur reduction I
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PWY-5332
sulfur reduction II (via polysulfide)
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PWY-5364
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
Taurine and hypotaurine metabolism
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TCA cycle I (prokaryotic)
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TCA
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
tetrapyrrole biosynthesis I (from glutamate)
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PWY-5188
tetrapyrrole biosynthesis II (from glycine)
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PWY-5189
Thiamine metabolism
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tRNA processing
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PWY0-1479
Tryptophan metabolism
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tryptophan metabolism
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Tyrosine metabolism
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tyrosine metabolism
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valine metabolism
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xanthommatin biosynthesis
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PWY-8249
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Desulfovibrio vulgaris str. Hildenborough)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA