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Information on Organism Capsella rubella

Synonyms:
Capsella rubella Reut.; Capsella rubella;
Word Map for Organism Capsella rubella
TaxTree of Organism Capsella rubella
Condensed Tree View
cellular organisms
Eukaryota can be found in Brenda BRENDA pathways(superkingdom)
Viridiplantae can be found in Brenda BRENDA pathways(kingdom)
Streptophyta can be found in Brenda BRENDA pathways(phylum)
Streptophytina can be found in Brenda (subphylum)
Embryophyta can be found in Brenda BRENDA pathways(clade)
Tracheophyta can be found in Brenda BRENDA pathways(clade)
Euphyllophyta can be found in Brenda BRENDA pathways(clade)
Spermatophyta can be found in Brenda BRENDA pathways(clade)
Magnoliopsida can be found in Brenda BRENDA pathways(class)
Mesangiospermae can be found in Brenda (clade)
eudicotyledons can be found in Brenda BRENDA pathways(clade)
Gunneridae can be found in Brenda BRENDA pathways(clade)
Pentapetalae can be found in Brenda (clade)
rosids can be found in Brenda BRENDA pathways(clade)
malvids can be found in Brenda BRENDA pathways(clade)
Brassicales can be found in Brenda BRENDA pathways(order)
Brassicaceae can be found in Brenda BRENDA pathways(family)
Camelineae can be found in Brenda (tribe)
Capsella can be found in Brenda BRENDA pathways(genus)
Capsella rubella can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(9Z)-tricosene biosynthesis
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PWY-7035
(R)-cysteate degradation
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PWY-6642
(S)-reticuline biosynthesis I
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PWY-3581
3-(4-hydroxyphenyl)pyruvate biosynthesis
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PWY-5886
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-hydroxybenzoate biosynthesis I (eukaryotes)
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PWY-5754
Alanine, aspartate and glutamate metabolism
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Aminobenzoate degradation
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anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)
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PWY-7601
arachidonate biosynthesis V (8-detaturase, mammals)
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PWY-7725
Arginine and proline metabolism
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Arginine biosynthesis
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aspartate and asparagine metabolism
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atromentin biosynthesis
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PWY-7518
bile acid biosynthesis, neutral pathway
Biosynthesis of secondary metabolites
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Biosynthesis of unsaturated fatty acids
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brassinolide biosynthesis I
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PWY-699
brassinolide biosynthesis II
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PWY-2582
Brassinosteroid biosynthesis
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
camalexin biosynthesis
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CAMALEXIN-SYN
Carbon fixation in photosynthetic organisms
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coenzyme M biosynthesis
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coenzyme M biosynthesis II
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PWY-6643
cyanide detoxification I
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ASPSYNII-PWY
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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cysteine metabolism
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Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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farnesene biosynthesis
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PWY-5725
Fatty acid elongation
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formaldehyde oxidation
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formaldehyde oxidation II (glutathione-dependent)
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PWY-1801
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis
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glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione metabolism
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glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
hydroxylated fatty acid biosynthesis (plants)
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PWY-6433
icosapentaenoate biosynthesis III (8-desaturase, mammals)
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PWY-7724
icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)
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PWY-7602
indole glucosinolate activation (herbivore attack)
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PWYQT-4476
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis V (bacteria and fungi)
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PWY-5026
indole-3-acetate biosynthesis VI (bacteria)
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TRPIAACAT-PWY
Isoquinoline alkaloid biosynthesis
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juniperonate biosynthesis
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PWY-7619
L-asparagine degradation III (mammalian)
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ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
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ASPARTATESYN-PWY
L-aspartate degradation I
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ASPARTATE-DEG1-PWY
L-glutamate degradation II
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GLUTDEG-PWY
L-phenylalanine biosynthesis I
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PHESYN
L-phenylalanine degradation II (anaerobic)
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ANAPHENOXI-PWY
L-phenylalanine degradation III
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PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
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PWY-6318
L-phenylalanine degradation VI (reductive Stickland reaction)
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PWY-8014
L-tryptophan degradation IV (via indole-3-lactate)
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TRPKYNCAT-PWY
L-tryptophan degradation VIII (to tryptophol)
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PWY-5081
L-tryptophan degradation XIII (reductive Stickland reaction)
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PWY-8017
L-tyrosine biosynthesis I
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TYRSYN
L-tyrosine degradation I
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TYRFUMCAT-PWY
L-tyrosine degradation II
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PWY-5151
L-tyrosine degradation III
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PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
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PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
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PWY-8016
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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Microbial metabolism in diverse environments
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Nitrogen metabolism
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non-pathway related
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Novobiocin biosynthesis
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octaprenyl diphosphate biosynthesis
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PWY-5783
pentachlorophenol degradation
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PCPDEG-PWY
Phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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photosynthesis
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Primary bile acid biosynthesis
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protein S-nitrosylation and denitrosylation
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PWY-7798
Pyruvate metabolism
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rosmarinic acid biosynthesis I
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PWY-5048
sciadonate biosynthesis
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PWY-6598
Sesquiterpenoid and triterpenoid biosynthesis
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Starch and sucrose metabolism
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starch degradation II
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PWY-6724
stearate biosynthesis I (animals)
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PWY-5972
Steroid hormone biosynthesis
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Styrene degradation
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sucrose degradation II (sucrose synthase)
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PWY-3801
sulfolactate degradation III
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PWY-6638
TCA cycle VIII (Chlamydia)
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TCA-1
Terpenoid backbone biosynthesis
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Tropane, piperidine and pyridine alkaloid biosynthesis
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Tryptophan metabolism
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tryptophan metabolism
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Tyrosine metabolism
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ubiquinone biosynthesis
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ultra-long-chain fatty acid biosynthesis
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PWY-8041
very long chain fatty acid biosynthesis I
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PWY-5080
very long chain fatty acid biosynthesis II
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PWY-7036
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
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amount of transcript increases 2fold after transfer into low temperature (12°C) or high light (750 microE) in all species
Manually annotated by BRENDA team
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LINKS TO OTHER DATABASES (specific for Capsella rubella)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA