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Information on Organism Bombiscardovia coagulans

Synonyms:
ATCC BAA-1568; Bifidobacteriaceae bacterium BLAPIII-AGV; Bombiscardovia coagulans Killer et al. 2014; Bombiscardovia coagulans; culture-collection:ATCC:BAA:1568; DSM 22924; strain BLAPIII-AGV; Bifidobacterium coagulans; Scardovia coagulans; "Bombiscardovia coagulans" Killer et al. 2010; "Bifidobacterium coagulans" Killer et al. 2007;
TaxTree of Organism Bombiscardovia coagulans
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Actinobacteria can be found in Brenda BRENDA pathways(phylum)
Actinomycetia can be found in Brenda BRENDA pathways(class)
Bifidobacteriales can be found in Brenda BRENDA pathways(order)
Bifidobacteriaceae can be found in Brenda BRENDA pathways(family)
Bombiscardovia can be found in Brenda (genus)
Bombiscardovia coagulans can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1,5-anhydrofructose degradation
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PWY-6992
1-methylpyrrolinium biosynthesis
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PWY-5315
3-methylbutanol biosynthesis (engineered)
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PWY-6871
acetaldehyde biosynthesis I
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PWY-6333
acetate fermentation
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acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetyl CoA biosynthesis
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acetylene degradation (anaerobic)
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P161-PWY
adenine and adenosine salvage I
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P121-PWY
adenine and adenosine salvage III
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PWY-6609
adenine and adenosine salvage V
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PWY-6611
adenosine nucleotides degradation II
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-
SALVADEHYPOX-PWY
alanine metabolism
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-
Alanine, aspartate and glutamate metabolism
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-
alpha-Linolenic acid metabolism
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alpha-tomatine degradation
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PWY18C3-5
Amaryllidacea alkaloids biosynthesis
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PWY-7826
Amino sugar and nucleotide sugar metabolism
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-
Aminobenzoate degradation
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ammonia oxidation II (anaerobic)
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P303-PWY
amygdalin and prunasin degradation
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PWY-6011
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anapleurotic synthesis of oxalacetate
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Arachidonic acid metabolism
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arachidonic acid metabolism
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Arginine and proline metabolism
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Arginine biosynthesis
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arsenic detoxification (mammals)
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PWY-4202
beta-alanine biosynthesis I
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PWY-3981
beta-Alanine metabolism
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Bifidobacterium shunt
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P124-PWY
bile acid biosynthesis, neutral pathway
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-
bile acids deconjugation
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PWY-8135
Biosynthesis of secondary metabolites
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bupropion degradation
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PWY66-241
Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
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PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
C5-Branched dibasic acid metabolism
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Caffeine metabolism
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Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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cellulose degradation
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cellulose degradation II (fungi)
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PWY-6788
Chloroalkane and chloroalkene degradation
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cholesterol biosynthesis
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Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation into oxaloacetate (anaplerotic)
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PWYQT-4429
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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cysteine metabolism
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D-arabinitol degradation I
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DARABITOLUTIL-PWY
d-xylose degradation
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D-xylose degradation I
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XYLCAT-PWY
degradation of pentoses
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degradation of sugar alcohols
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denitrification
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diethylphosphate degradation
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PWY-5491
Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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Entner-Doudoroff pathway I
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PWY-8004
Escherichia coli serotype O:1B/Salmonella enterica serotype O:42 O antigen biosynthesis
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PWY-8237
Escherichia coli serotype O:85/Salmonella enterica serotype O:17 O antigen biosynthesis
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PWY-8207
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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PWY66-162
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis V (engineered)
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PWY-7124
Fatty acid degradation
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firefly bioluminescence
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PWY-7913
fluoroacetate and fluorothreonine biosynthesis
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PWY-6644
Folate biosynthesis
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formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
fructan degradation
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PWY-862
Fructose and mannose metabolism
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Galactose metabolism
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gamma-glutamyl cycle
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PWY-4041
ginsenoside metabolism
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gluconeogenesis
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gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione metabolism
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glutathione-peroxide redox reactions
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PWY-4081
glycerol degradation II
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PWY-6131
glycerol degradation to butanol
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PWY-7003
glycerol degradation V
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GLYCEROLMETAB-PWY
Glycerolipid metabolism
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glycine metabolism
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Glycine, serine and threonine metabolism
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glycogen degradation I
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GLYCOCAT-PWY
glycogen metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
guanine and guanosine salvage I
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PWY-6620
guanosine nucleotides degradation III
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PWY-6608
heterolactic fermentation
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P122-PWY
histamine biosynthesis
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PWY-6173
histamine degradation
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PWY-6181
Histidine metabolism
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histidine metabolism
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hypoglycin biosynthesis
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PWY-5826
incomplete reductive TCA cycle
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P42-PWY
inosine 5'-phosphate degradation
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PWY-5695
L-alanine biosynthesis II
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ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation III
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ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-arabinose degradation I
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ARABCAT-PWY
L-cysteine biosynthesis I
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CYSTSYN-PWY
L-histidine degradation V
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PWY-5031
L-isoleucine degradation II
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PWY-5078
L-lactaldehyde degradation
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L-leucine degradation III
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PWY-5076
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
lactate fermentation
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lanosterol biosynthesis
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PWY-6132
leucine metabolism
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leukotriene biosynthesis
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PWY66-375
linamarin degradation
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PWY-3121
Linoleic acid metabolism
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linustatin bioactivation
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PWY-7091
lipid metabolism
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lotaustralin degradation
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PWY-6002
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
manganese oxidation I
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PWY-6591
melatonin degradation I
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PWY-6398
Metabolic pathways
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metabolism of amino sugars and derivatives
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metabolism of disaccharids
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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Methanobacterium thermoautotrophicum biosynthetic metabolism
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PWY-6146
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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methylaspartate cycle
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NAD metabolism
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Naphthalene degradation
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neolinustatin bioactivation
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PWY-7092
Nicotinate and nicotinamide metabolism
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nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
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PWY-6748
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
Nitrogen metabolism
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nitrogen remobilization from senescing leaves
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PWY-6549
non-pathway related
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noradrenaline and adrenaline degradation
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PWY-6342
nucleoside and nucleotide degradation (archaea)
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PWY-5532
O-Antigen nucleotide sugar biosynthesis
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Other glycan degradation
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oxidative decarboxylation of pyruvate
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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partial TCA cycle (obligate autotrophs)
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PWY-5913
Pentose and glucuronate interconversions
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peptido-conjugates in tissue regeneration biosynthesis
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PWY-8355
phenylalanine metabolism
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phenylethanol biosynthesis
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PWY-5751
Phenylpropanoid biosynthesis
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phosphate acquisition
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PWY-6348
phosphopantothenate biosynthesis I
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PANTO-PWY
photorespiration I
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PWY-181
photosynthesis
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phytol degradation
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PWY66-389
poly(3-O-beta-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis
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PWY-7819
poly(glycerol phosphate) wall teichoic acid biosynthesis
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TEICHOICACID-PWY
poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis)
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PWY-7815
poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus)
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PWY-7816
Primary bile acid biosynthesis
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Propanoate metabolism
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propanol degradation
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purine deoxyribonucleosides degradation I
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PWY-7179
purine deoxyribonucleosides degradation II
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PWY-7179-1
Purine metabolism
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purine metabolism
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purine ribonucleosides degradation
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PWY0-1296
Pyrimidine metabolism
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pyruvate decarboxylation to acetyl CoA I
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PYRUVDEHYD-PWY
pyruvate decarboxylation to acetyl CoA II
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PWY-6970
pyruvate fermentation to (R)-lactate
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PWY-8274
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to acetate IV
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PWY-5485
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
reductive monocarboxylic acid cycle
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PWY-5493
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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PWY-6857
Retinol metabolism
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-
Riboflavin metabolism
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salidroside biosynthesis
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PWY-6802
salinosporamide A biosynthesis
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PWY-6627
Salmonella enterica serotype O:54 O antigen biosynthesis
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PWY-8204
Secondary bile acid biosynthesis
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seleno-amino acid biosynthesis (plants)
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PWY-6936
serotonin degradation
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PWY-6313
serotonin metabolism
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Sphingolipid metabolism
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Starch and sucrose metabolism
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starch degradation
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starch degradation I
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PWY-842
Steroid biosynthesis
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-
Steroid hormone biosynthesis
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sucrose biosynthesis I (from photosynthesis)
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SUCSYN-PWY
sulfopterin metabolism
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Sulfur metabolism
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superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
Taurine and hypotaurine metabolism
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TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
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TCA-1
Thiamine metabolism
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threonine metabolism
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triacylglycerol degradation
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LIPAS-PWY
Tryptophan metabolism
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-
tryptophan metabolism
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-
Tyrosine metabolism
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tyrosine metabolism
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-
UDP-N-acetyl-alpha-D-mannosaminouronate biosynthesis
-
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PWY-7335
valine metabolism
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Valine, leucine and isoleucine biosynthesis
-
-
Valine, leucine and isoleucine degradation
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-
vancomycin resistance I
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-
PWY-6454
vanillin biosynthesis I
-
-
PWY-5665
vitamin B1 metabolism
-
-
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xylitol degradation I
-
-
LARABITOLUTIL-PWY
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
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LINKS TO OTHER DATABASES (specific for Bombiscardovia coagulans)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA