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(S)-lactate fermentation to propanoate, acetate and hydrogen
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Bifidobacterium shunt
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Biosynthesis of secondary metabolites
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Cysteine and methionine metabolism
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Glycolysis / Gluconeogenesis
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heterolactic fermentation
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L-histidine degradation V
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L-lactaldehyde degradation
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Microbial metabolism in diverse environments
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Propanoate metabolism
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pyruvate fermentation to (S)-lactate
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superpathway of glucose and xylose degradation
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cytosolic NADPH production (yeast)
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Entner-Doudoroff pathway I
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formaldehyde oxidation I
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Glutathione metabolism
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Pentose phosphate pathway
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pentose phosphate pathway
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pentose phosphate pathway (oxidative branch) I
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superpathway of glycolysis and the Entner-Doudoroff pathway
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2-deoxy-D-glucose 6-phosphate degradation
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3-dehydroquinate biosynthesis II (archaea)
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cremeomycin biosynthesis
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dipicolinate biosynthesis
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Glycine, serine and threonine metabolism
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grixazone biosynthesis
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L-homoserine biosynthesis
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L-lysine biosynthesis I
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L-lysine biosynthesis II
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L-lysine biosynthesis III
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L-lysine biosynthesis VI
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L-methionine biosynthesis IV
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Monobactam biosynthesis
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norspermidine biosynthesis
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platensimycin biosynthesis
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spermidine biosynthesis II
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Carbon fixation in photosynthetic organisms
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aerobic respiration I (cytochrome c)
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aerobic respiration II (cytochrome c) (yeast)
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aerobic respiration III (alternative oxidase pathway)
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Carbon fixation pathways in prokaryotes
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Citrate cycle (TCA cycle)
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Oxidative phosphorylation
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partial TCA cycle (obligate autotrophs)
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propionate fermentation
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succinate to chytochrome c oxidase via cytochrome c6
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succinate to cytochrome bd oxidase electron transfer
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succinate to cytochrome bo oxidase electron transfer
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succinate to cytochrome c oxidase via plastocyanin
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succinate to plastoquinol oxidase
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superpathway of glyoxylate cycle and fatty acid degradation
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TCA cycle I (prokaryotic)
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TCA cycle II (plants and fungi)
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TCA cycle III (animals)
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TCA cycle IV (2-oxoglutarate decarboxylase)
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TCA cycle V (2-oxoglutarate synthase)
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TCA cycle VII (acetate-producers)
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TCA cycle VIII (Chlamydia)
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Arginine and proline metabolism
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aromatic biogenic amine degradation (bacteria)
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Drug metabolism - cytochrome P450
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Isoquinoline alkaloid biosynthesis
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L-phenylalanine degradation IV (mammalian, via side chain)
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L-tryptophan degradation VI (via tryptamine)
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L-tryptophan degradation X (mammalian, via tryptamine)
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melatonin degradation II
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noradrenaline and adrenaline degradation
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Phenylalanine metabolism
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putrescine degradation III
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salidroside biosynthesis
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serotonin degradation
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Tryptophan metabolism
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tryptophan metabolism
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dTMP de novo biosynthesis (mitochondrial)
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folate transformations II (plants)
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folate transformations III (E. coli)
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One carbon pool by folate
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tetrahydrofolate biosynthesis
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tetrahydrofolate metabolism
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Ascorbate and aldarate metabolism
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ascorbate recycling (cytosolic)
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ammonia oxidation II (anaerobic)
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nitrate reduction I (denitrification)
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nitrate reduction VII (denitrification)
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nitrifier denitrification
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nitrite-dependent anaerobic methane oxidation
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glutathione metabolism
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glutathione-peroxide redox reactions
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Selenocompound metabolism
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o-diquinones biosynthesis
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gossypol biosynthesis
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justicidin B biosynthesis
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matairesinol biosynthesis
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ethanol degradation IV
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Glyoxylate and dicarboxylate metabolism
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methanol oxidation to formaldehyde IV
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reactive oxygen species degradation
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superoxide radicals degradation
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baicalein degradation (hydrogen peroxide detoxification)
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betanidin degradation
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luteolin triglucuronide degradation
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Phenylpropanoid biosynthesis
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xanthommatin biosynthesis
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Arachidonic acid metabolism
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arachidonic acid metabolism
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Drug metabolism - other enzymes
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alpha-Linolenic acid metabolism
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divinyl ether biosynthesis II
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jasmonic acid biosynthesis
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Linoleic acid metabolism
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traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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15-epi-lipoxin biosynthesis
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anandamide lipoxygenation
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aspirin triggered resolvin D biosynthesis
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aspirin triggered resolvin E biosynthesis
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leukotriene biosynthesis
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resolvin D biosynthesis
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3-hydroxy-4-methyl-anthranilate biosynthesis I
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3-hydroxy-4-methyl-anthranilate biosynthesis II
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L-tryptophan degradation I (via anthranilate)
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L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
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L-tryptophan degradation XI (mammalian, via kynurenine)
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procollagen hydroxylation and glycosylation
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Arginine biosynthesis
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nitric oxide biosynthesis II (mammals)
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1,5-anhydrofructose degradation
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acetone degradation I (to methylglyoxal)
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acetone degradation III (to propane-1,2-diol)
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Amaryllidacea alkaloids biosynthesis
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Aminobenzoate degradation
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bupropion degradation
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Fatty acid degradation
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melatonin degradation I
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Metabolism of xenobiotics by cytochrome P450
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nicotine degradation IV
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nicotine degradation V
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Steroid hormone biosynthesis
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vanillin biosynthesis I
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bacterial bioluminescence
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C20 prostanoid biosynthesis
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ethene biosynthesis III (microbes)
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Porphyrin and chlorophyll metabolism
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caffeine degradation III (bacteria, via demethylation)
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theophylline degradation
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pyrimidine deoxyribonucleosides salvage
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pyrimidine deoxyribonucleotides biosynthesis from CTP
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pyrimidine deoxyribonucleotides de novo biosynthesis I
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pyrimidine deoxyribonucleotides de novo biosynthesis II
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pyrimidine deoxyribonucleotides de novo biosynthesis IV
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Pyrimidine metabolism
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pyrimidine metabolism
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superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
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Glycerophospholipid metabolism
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D-Amino acid metabolism
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Cyanoamino acid metabolism
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hypoglycin biosynthesis
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Taurine and hypotaurine metabolism
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protein ubiquitination
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metabolism of disaccharids
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Starch and sucrose metabolism
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trehalose biosynthesis I
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Amino sugar and nucleotide sugar metabolism
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Pentose and glucuronate interconversions
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saponin biosynthesis II
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thyroid hormone metabolism II (via conjugation and/or degradation)
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Other types of O-glycan biosynthesis
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2'-deoxymugineic acid phytosiderophore biosynthesis
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ethene biosynthesis I (plants)
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L-methionine degradation I (to L-homocysteine)
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methionine metabolism
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S-adenosyl-L-methionine biosynthesis
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S-adenosyl-L-methionine salvage I
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S-adenosyl-L-methionine salvage II
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anhydromuropeptides recycling I
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Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
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UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing)
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4-hydroxy-2-nonenal detoxification
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camalexin biosynthesis
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gliotoxin biosynthesis
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glutathione-mediated detoxification I
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glutathione-mediated detoxification II
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indole glucosinolate activation (intact plant cell)
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pentachlorophenol degradation
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chorismate biosynthesis from 3-dehydroquinate
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chorismate metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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L-nicotianamine biosynthesis
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L-cysteine biosynthesis I
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seleno-amino acid biosynthesis (plants)
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Terpenoid backbone biosynthesis
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cis-zeatin biosynthesis
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(R)-cysteate degradation
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(S)-reticuline biosynthesis I
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3-(4-hydroxyphenyl)pyruvate biosynthesis
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4-hydroxybenzoate biosynthesis I (eukaryotes)
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Alanine, aspartate and glutamate metabolism
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anaerobic energy metabolism (invertebrates, cytosol)
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aspartate and asparagine metabolism
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atromentin biosynthesis
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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C4 photosynthetic carbon assimilation cycle, PEPCK type
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coenzyme M biosynthesis
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coenzyme M biosynthesis II
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glutamate and glutamine metabolism
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indole-3-acetate biosynthesis II
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indole-3-acetate biosynthesis VI (bacteria)
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L-asparagine degradation III (mammalian)
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L-aspartate biosynthesis
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L-aspartate degradation I
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L-glutamate degradation II
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L-phenylalanine biosynthesis I
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L-phenylalanine degradation II (anaerobic)
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L-phenylalanine degradation III
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L-phenylalanine degradation VI (reductive Stickland reaction)
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L-tryptophan degradation IV (via indole-3-lactate)
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L-tryptophan degradation VIII (to tryptophol)
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L-tryptophan degradation XIII (reductive Stickland reaction)
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L-tyrosine biosynthesis I
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L-tyrosine degradation I
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L-tyrosine degradation II
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L-tyrosine degradation III
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L-tyrosine degradation IV (to 4-methylphenol)
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L-tyrosine degradation V (reductive Stickland reaction)
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malate/L-aspartate shuttle pathway
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Novobiocin biosynthesis
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rosmarinic acid biosynthesis I
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sulfolactate degradation III
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Tropane, piperidine and pyridine alkaloid biosynthesis
-
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L-alanine biosynthesis II
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L-alanine degradation II (to D-lactate)
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L-alanine degradation III
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L-alanine degradation V (oxidative Stickland reaction)
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L-alanine degradation VI (reductive Stickland reaction)
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1,3-propanediol biosynthesis (engineered)
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Fructose and mannose metabolism
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GDP-alpha-D-glucose biosynthesis
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glucose and glucose-1-phosphate degradation
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glycogen degradation I
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glycogen degradation II
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glycolysis III (from glucose)
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Neomycin, kanamycin and gentamicin biosynthesis
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Streptomycin biosynthesis
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-
sucrose biosynthesis II
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sucrose degradation III (sucrose invertase)
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trehalose degradation I (low osmolarity)
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trehalose degradation II (cytosolic)
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trehalose degradation IV
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trehalose degradation V
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UDP-N-acetyl-D-galactosamine biosynthesis II
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UDP-N-acetyl-D-glucosamine biosynthesis II
-
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1-butanol autotrophic biosynthesis (engineered)
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Entner-Doudoroff pathway II (non-phosphorylative)
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Entner-Doudoroff pathway III (semi-phosphorylative)
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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glycerol degradation to butanol
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glycolysis I (from glucose 6-phosphate)
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glycolysis II (from fructose 6-phosphate)
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glycolysis V (Pyrococcus)
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mixed acid fermentation
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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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3-phosphoinositide biosynthesis
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Inositol phosphate metabolism
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Calvin-Benson-Bassham cycle
-
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formaldehyde assimilation III (dihydroxyacetone cycle)
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sucrose biosynthesis I (from photosynthesis)
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adenosine ribonucleotides de novo biosynthesis
-
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adenosine deoxyribonucleotides de novo biosynthesis I
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adenosine deoxyribonucleotides de novo biosynthesis II
-
-
guanosine deoxyribonucleotides de novo biosynthesis I
-
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guanosine deoxyribonucleotides de novo biosynthesis II
-
-
guanosine ribonucleotides de novo biosynthesis
-
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purine deoxyribonucleosides salvage
-
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pyrimidine deoxyribonucleotide phosphorylation
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pyrimidine deoxyribonucleotides de novo biosynthesis III
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-
UTP and CTP de novo biosynthesis
-
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C4 photosynthetic carbon assimilation cycle, NADP-ME type
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nitrogen remobilization from senescing leaves
-
-
methyl indole-3-acetate interconversion
-
-
methylsalicylate degradation
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-
superpathway of methylsalicylate metabolism
-
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Glycerolipid metabolism
-
-
triacylglycerol degradation
-
-
diethylphosphate degradation
-
-
sulfopterin metabolism
-
-
phosphate acquisition
-
-
Riboflavin metabolism
-
-
vitamin B1 metabolism
-
-
L-serine biosynthesis I
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-
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
mycolate biosynthesis
-
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trehalose biosynthesis II
-
-
trehalose biosynthesis III
-
-
cellulose degradation
-
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cellulose degradation II (fungi)
-
-
chitin degradation I (archaea)
-
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chitin degradation II (Vibrio)
-
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chitin degradation III (Serratia)
-
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Glycosphingolipid biosynthesis - globo and isoglobo series
-
-
melibiose degradation
-
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Sphingolipid metabolism
-
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stachyose degradation
-
-
Glycosaminoglycan degradation
-
-
Glycosphingolipid biosynthesis - ganglio series
-
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lactose degradation II
-
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Other glycan degradation
-
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xyloglucan degradation II (exoglucanase)
-
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trehalose degradation VI (periplasmic)
-
-
peptidoglycan biosynthesis II (staphylococci)
-
-
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
nocardicin A biosynthesis
-
-
lipoprotein posttranslational modification
-
-
allantoin degradation
-
-
urate conversion to allantoin I
-
-
urate conversion to allantoin II
-
-
urate conversion to allantoin III
-
-
canavanine degradation
-
-
L-arginine degradation I (arginase pathway)
-
-
L-arginine degradation VI (arginase 2 pathway)
-
-
L-arginine degradation VII (arginase 3 pathway)
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-
L-citrulline biosynthesis
-
-
L-Ndelta-acetylornithine biosynthesis
-
-
putrescine biosynthesis III
-
-
pyrimidine deoxyribonucleosides degradation
-
-
pyrimidine ribonucleosides degradation
-
-
pyrimidine ribonucleosides salvage I
-
-
pyrimidine ribonucleosides salvage II
-
-
superpathway of ornithine degradation
-
-
(S)-reticuline biosynthesis II
-
-
beta-carboline biosynthesis
-
-
Betalain biosynthesis
-
-
betaxanthin biosynthesis
-
-
betaxanthin biosynthesis (via dopamine)
-
-
catecholamine biosynthesis
hydroxycinnamic acid serotonin amides biosynthesis
-
-
hydroxycinnamic acid tyramine amides biosynthesis
-
-
L-dopa degradation II (bacterial)
-
-
methanofuran biosynthesis
-
-
octopamine biosynthesis
-
-
phenylethanol biosynthesis
-
-
psilocybin biosynthesis
-
-
secologanin and strictosidine biosynthesis
-
-
serotonin and melatonin biosynthesis
-
-
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
pentose phosphate pathway (non-oxidative branch) II
-
-
sedoheptulose bisphosphate bypass
-
-
sucrose degradation V (sucrose alpha-glucosidase)
-
-
ethene biosynthesis V (engineered)
-
-
formaldehyde assimilation I (serine pathway)
-
-
C5-Branched dibasic acid metabolism
-
-
L-glutamate degradation VI (to pyruvate)
-
-
isoprenoid biosynthesis
-
-
methylerythritol phosphate pathway I
-
-
methylerythritol phosphate pathway II
-
-
heme b biosynthesis I (aerobic)
-
-
heme b biosynthesis II (oxygen-independent)
-
-
heme b biosynthesis V (aerobic)
-
-
D-sorbitol biosynthesis I
-
-
GDP-mannose biosynthesis
-
-
sucrose biosynthesis III
-
-
sucrose degradation II (sucrose synthase)
-
-
sucrose degradation IV (sucrose phosphorylase)
-
-
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
eumelanin biosynthesis
-
-
CDP-6-deoxy-D-gulose biosynthesis
-
-
D-galactose degradation I (Leloir pathway)
-
-
degradation of hexoses
-
-
dTDP-beta-L-rhamnose biosynthesis
-
-
glucosylglycerol biosynthesis
-
-
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
starch degradation III
-
-
streptomycin biosynthesis
-
-
UDP-alpha-D-glucose biosynthesis
-
-
Entner Doudoroff pathway
-
-
2,3-dihydroxybenzoate biosynthesis
-
-
2-carboxy-1,4-naphthoquinol biosynthesis
-
-
Biosynthesis of siderophore group nonribosomal peptides
-
-
enterobactin biosynthesis
-
-
salicylate biosynthesis I
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
-
-
O-antigen building blocks biosynthesis (E. coli)
-
-
O-Antigen nucleotide sugar biosynthesis
-
-
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
-
-
UDP-alpha-D-galactofuranose biosynthesis
-
-
Aminoacyl-tRNA biosynthesis
-
-
beta-Alanine metabolism
-
-
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
phosphopantothenate biosynthesis I
-
-
ergothioneine biosynthesis I (bacteria)
-
-
glutathione biosynthesis
-
-
homoglutathione biosynthesis
-
-
ophthalmate biosynthesis
-
-
Aflatoxin biosynthesis
-
-
CO2 fixation in Crenarchaeota
-
-
Fatty acid biosynthesis
-
-
fatty acid biosynthesis initiation (mitochondria)
-
-
fatty acid biosynthesis initiation (type I)
-
-
jadomycin biosynthesis
-
-
formate to nitrite electron transfer
-
-
nitrate reduction X (dissimilatory, periplasmic)
-
-
oxidative phosphorylation
-
-
arsenite to oxygen electron transfer
-
-
arsenite to oxygen electron transfer (via azurin)
-
-
NADPH to cytochrome c oxidase via plastocyanin
-
-
arsenate detoxification I
-
-
oleandomycin activation/inactivation
-
-
methylaspartate cycle

-
-
methylaspartate cycle
-
-
urea cycle

-
-
catecholamine biosynthesis

-
-
catecholamine biosynthesis
-
-
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