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Information on Organism Clostridioides difficile 630

Clostridioides difficile 630; Clostridium difficile 630 (epidemic type X); Clostridium difficile 630; Clostridium difficile str. 630; Clostridium difficile strain 630; Peptoclostridium difficile 630;

TaxTree of Organism Clostridioides difficile 630

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cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Terrabacteria group can be found in Brenda

can be found in Brenda

(clade)

Firmicutes can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Clostridia can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Eubacteriales can be found in Brenda

can be found in Brenda

BRENDA pathways

(order)

Peptostreptococcaceae can be found in Brenda

can be found in Brenda

BRENDA pathways

(family)

Clostridioides can be found in Brenda

can be found in Brenda

BRENDA pathways

(genus)

Clostridioides difficile can be found in Brenda

can be found in Brenda

BRENDA pathways

(species)

Clostridioides difficile 630

can be found in Brenda

BRENDA pathways

(strain)

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preliminary BRENDA-supplied EC number

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3-dehydroquinate biosynthesis II (archaea)

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PWY-6160

alanine metabolism

alanine metabolism

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alanine racemization

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PWY-8072

Alanine, aspartate and glutamate metabolism

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Amino sugar and nucleotide sugar metabolism

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Aminoacyl-tRNA biosynthesis

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anaerobic energy metabolism (invertebrates, cytosol)

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PWY-7383

ansatrienin biosynthesis

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PWY-8040

Arginine and proline metabolism

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arginine dependent acid resistance

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PWY0-1299

aspartate and asparagine metabolism

aspartate and asparagine metabolism

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Biosynthesis of secondary metabolites

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bis(guanylyl molybdopterin) cofactor sulfurylation

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PWY-8164

Carbon fixation pathways in prokaryotes

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chitin degradation II (Vibrio)

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PWY-6902

chitin degradation III (Serratia)

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PWY-7822

chorismate biosynthesis from 3-dehydroquinate

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PWY-6163

chorismate metabolism

chorismate metabolism

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cremeomycin biosynthesis

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PWY-8296

Cyanoamino acid metabolism

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Cysteine and methionine metabolism

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cysteine metabolism

cysteine metabolism

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cytidylyl molybdenum cofactor sulfurylation

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PWY-8165

D-Amino acid metabolism

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D-mannose degradation I

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MANNCAT-PWY

denitrification

denitrification

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dipicolinate biosynthesis

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PWY-8088

ectoine biosynthesis

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P101-PWY

fructan degradation

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PWY-862

Fructose and mannose metabolism

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gallate biosynthesis

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PWY-6707

glycine degradation (reductive Stickland reaction)

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PWY-8015

glycine metabolism

glycine metabolism

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Glycine, serine and threonine metabolism

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Glycosaminoglycan degradation

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Glycosphingolipid biosynthesis - ganglio series

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Glycosphingolipid biosynthesis - globo and isoglobo series

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grixazone biosynthesis

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PWY-7153

L-alanine biosynthesis III

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PWY0-1021

L-alanine degradation I

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ALADEG-PWY

L-arginine degradation III (arginine decarboxylase/agmatinase pathway)

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PWY0-823

L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)

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ARGDEG-III-PWY

L-arginine degradation XIV (oxidative Stickland reaction)

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PWY-6344

L-asparagine biosynthesis II

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ASPARAGINESYN-PWY

L-homocysteine biosynthesis

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PWY-5344

L-homoserine biosynthesis

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HOMOSERSYN-PWY

L-lysine biosynthesis I

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DAPLYSINESYN-PWY

L-lysine biosynthesis II

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PWY-2941

L-lysine biosynthesis III

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PWY-2942

L-lysine biosynthesis VI

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PWY-5097

L-methionine biosynthesis IV

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PWY-7977

L-proline degradation II (reductive Stickland reaction)

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PWY-8186

Lysine biosynthesis

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Lysine degradation

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lysine metabolism

lysine metabolism

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Metabolic pathways

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methanogenesis from acetate

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METH-ACETATE-PWY

methionine metabolism

methionine metabolism

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Microbial metabolism in diverse environments

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molybdopterin biosynthesis

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PWY-6823

Monobactam biosynthesis

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nitrate reduction I (denitrification)

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DENITRIFICATION-PWY

nitrifier denitrification

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PWY-7084

Nitrogen metabolism

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nocardicin A biosynthesis

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PWY-7797

norspermidine biosynthesis

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PWY-6562

ornithine metabolism

ornithine metabolism

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Other glycan degradation

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peptidoglycan recycling I

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PWY0-1261

peptidoglycan recycling II

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PWY-7883

Phenylalanine, tyrosine and tryptophan biosynthesis

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platensimycin biosynthesis

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PWY-8179

polyamine pathway

polyamine pathway

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proline metabolism

proline metabolism

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Propanoate metabolism

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purine metabolism

purine metabolism

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purine nucleobases degradation I (anaerobic)

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P164-PWY

putrescine biosynthesis I

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PWY-40

putrescine biosynthesis II

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PWY-43

pyruvate fermentation to propanoate II (acrylate pathway)

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PWY-5494

quinate degradation I

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QUINATEDEG-PWY

quinate degradation II

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PWY-6416

reductive acetyl coenzyme A pathway

reductive acetyl coenzyme A pathway

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reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)

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CODH-PWY

reductive glycine pathway of autotrophic CO2 fixation

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PWY-8303

S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II

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PWY-7174

S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation III

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PWY-8132

Selenocompound metabolism

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spermidine biosynthesis II

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PWY-6559

spermidine biosynthesis III

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PWY-6834

Styrene degradation

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Thiamine metabolism

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thiazole component of thiamine diphosphate biosynthesis I

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PWY-6892

threonine metabolism

threonine metabolism

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tRNA charging

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TRNA-CHARGING-PWY

tRNA-uridine 2-thiolation and selenation (bacteria)

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PWY-7892

Various types of N-glycan biosynthesis

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vitamin B1 metabolism

vitamin B1 metabolism

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[2Fe-2S] iron-sulfur cluster biosynthesis

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PWY-7250

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Clostridioides difficile 630

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Clostridioides difficile 630

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Manually annotated by BRENDA team

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Clostridioides difficile 630

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Manually annotated by BRENDA team

Clostridioides difficile 630

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Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

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Release 2023.1 (January 2023)