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Literature summary extracted from

  • Giastas, P.; Andreou, A.; Papakyriakou, A.; Koutsioulis, D.; Balomenou, S.; Tzartos, S.J.; Bouriotis, V.; Eliopoulos, E.E.
    Structures of the peptidoglycan N-acetylglucosamine deacetylase Bc1974 and its complexes with zinc metalloenzyme inhibitors (2018), Biochemistry, 57, 753-763 .
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.5.1.104 gene BC_1974, sequence comaprisons Bacillus cereus

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
3.5.1.104 crystal structure analysis of Zn-bound and acetate-bound Bc1974 enzyme, PDB ID 5N1J, structure comparisons. Analysis of X-ray crystal structures of the NodB domain of Bc1974, the conserved catalytic core of CE4s, in the unliganded form and in complex with four known metalloenzyme inhibitors and two amino acid hydroxamates that target the active site metal Bacillus cereus

Inhibitors

EC Number Inhibitors Comment Organism Structure
3.5.1.104 1-naphthohydroxamic acid complete inhibition at 0.5 mM Bacillus cereus
3.5.1.104 3-biphenyl-hydroxamic acid
-
Bacillus cereus
3.5.1.104 acetazolamide
-
Bacillus cereus
3.5.1.104 actinonin
-
Bacillus cereus
3.5.1.104 batimastat
-
Bacillus cereus
3.5.1.104 CP-471474
-
Bacillus cereus
3.5.1.104 DL-methionine
-
Bacillus cereus
3.5.1.104 DL-phenylalanine
-
Bacillus cereus
3.5.1.104 DL-Serine hydroxamate
-
Bacillus cereus
3.5.1.104 L-Arginine hydroxamate
-
Bacillus cereus
3.5.1.104 L-Lysine hydroxamate
-
Bacillus cereus
3.5.1.104 marimastat
-
Bacillus cereus
3.5.1.104 N'-hydroxy-N-(2-methyl-5-nitrophenyl)oxamide
-
Bacillus cereus
3.5.1.104 N-hydroxy-(4-naphthalen-1-yl)benzazmide
-
Bacillus cereus
3.5.1.104 N-hydroxy-2,2-diphenylacetamide
-
Bacillus cereus
3.5.1.104 N-hydroxy-3-(naphthalen-1-yl)acrylamide
-
Bacillus cereus
3.5.1.104 N-hydroxy-3-phenoxybenzamide
-
Bacillus cereus
3.5.1.104 N-hydroxy-4-(isoquinolin-4-yl)benzamide
-
Bacillus cereus
3.5.1.104 N5-hydroxy-L-glutamine
-
Bacillus cereus
3.5.1.104 streptozotocin
-
Bacillus cereus
3.5.1.104 thiamet G
-
Bacillus cereus
3.5.1.104 UK-356618
-
Bacillus cereus
3.5.1.104 verinostat i.e. SAHA Bacillus cereus
3.5.1.104 Z-Pro-Leu-Gly hydroxamate
-
Bacillus cereus
3.5.1.104 Z-PUGNAc
-
Bacillus cereus

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
3.5.1.104 Zn2+ a zinc metalloenzyme, active site metal Bacillus cereus

Organism

EC Number Organism UniProt Comment Textmining
3.5.1.104 Bacillus cereus Q81EJ6
-
-
3.5.1.104 Bacillus cereus ATCC 14579 Q81EJ6
-
-
3.5.1.104 Bacillus cereus DSM 31 Q81EJ6
-
-
3.5.1.104 Bacillus cereus JCM 2152 Q81EJ6
-
-
3.5.1.104 Bacillus cereus NBRC 15305 Q81EJ6
-
-
3.5.1.104 Bacillus cereus NCIMB 9373 Q81EJ6
-
-
3.5.1.104 Bacillus cereus NRRL B-3711 Q81EJ6
-
-

Synonyms

EC Number Synonyms Comment Organism
3.5.1.104 Bc1974
-
Bacillus cereus
3.5.1.104 peptidoglycan N-acetylglucosamine deacetylase
-
Bacillus cereus

General Information

EC Number General Information Comment Organism
3.5.1.104 evolution Bacillus cereus, a close relative of the highly virulent Bacillus anthracis, contains 10 polysaccharide deacetylases. Among these, the peptidoglycan N-acetylglucosamine deacetylase Bc1974 is the highest homologue to the Bacillus anthracis Ba1977 that is required for full virulence and is involved in resistance to the host's lysozyme. These metalloenzymes belong to the carbohydrate esterase family 4 (CE4) Bacillus cereus
3.5.1.104 additional information Bc1974 substrate docking and molecular modelling, overview. Presence of two conformational states of a catalytic loop known as motif-4 (MT4) previously unknown for peptidoglycan deacetylases, comparison to structure of a Vibrio clolerae chitin deacetylase. The deduced catalytic mechanism probably involves initial binding of the substrate in a receptive, more open state of MT4 and optimal catalytic activity in the closed state of MT4 Bacillus cereus