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Literature summary extracted from

  • Friedrich, C.G.; Quentmeier, A.; Bardischewsky, F.; Rother, D.; Kraft, R.; Kostka, S.; Prinz, H.
    Novel genes coding for lithotrophic sulfur oxidation of Paracoccus pantotrophus GB17 (2000), J. Bacteriol., 182, 4677-4687 .
    View publication on PubMedView publication on EuropePMC

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
2.8.5.2 periplasm
-
 Paracoccus pantotrophus
-
-

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
3.1.6.20 Mn2+ contains 1.75 atoms of Mn per mol enzyme Paracoccus pantotrophus

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3.1.6.20 [SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O Paracoccus pantotrophus
-
 [SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
 ?
3.1.6.20 [SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O Paracoccus pantotrophus GB17
-
 [SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
 ?
3.1.6.20 [SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O Paracoccus pantotrophus
-
 [SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
 ?
3.1.6.20 [SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O Paracoccus pantotrophus GB17
-
 [SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
2.8.5.2 Paracoccus pantotrophus O33434 AND Q9LCV0 O33434: subunit SoxA, Q9LCV0: subunit SoxX
-
3.1.6.20 Paracoccus pantotrophus
-
-
-
3.1.6.20 Paracoccus pantotrophus GB17
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
2.8.5.2
-
 Paracoccus pantotrophus
3.1.6.20 Q Sepharose column chromatography, phenyl Sepharose column chromatography, and Sephacryl S-200 gel filtration Paracoccus pantotrophus

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.1.6.20 horse heart cytochrome c + sulfide
-
 Paracoccus pantotrophus ?
-
 ?
3.1.6.20 horse heart cytochrome c + sulfide
-
 Paracoccus pantotrophus GB17 ?
-
 ?
3.1.6.20 horse heart cytochrome c + thiosulfate
-
 Paracoccus pantotrophus ?
-
 ?
3.1.6.20 horse heart cytochrome c + thiosulfate
-
 Paracoccus pantotrophus GB17 ?
-
 ?
3.1.6.20 [SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
-
 Paracoccus pantotrophus [SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
 ?
3.1.6.20 [SoxYZ protein]-S-(2-sulfodisulfanyl)-L-cysteine + H2O
-
 Paracoccus pantotrophus GB17 [SoxYZ protein]-S-disulfanyl-L-cysteine + sulfate
-
 ?
3.1.6.20 [SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
-
 Paracoccus pantotrophus [SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
 ?
3.1.6.20 [SoxYZ protein]-S-sulfosulfanyl-L-cysteine + H2O
-
 Paracoccus pantotrophus GB17 [SoxYZ protein]-S-sulfanyl-L-cysteine + sulfate
-
 ?

Subunits

EC Number Subunits Comment Organism
2.8.5.2 dimer 1 * 30452 (subunit SoxA) + 1 * 14834 (subunit SoxX), electrospray ionization spectroscopy Paracoccus pantotrophus
3.1.6.20 ? x * 59000, SDS-PAGE Paracoccus pantotrophus
3.1.6.20 ? x * 58786, calculated from amino acid sequence Paracoccus pantotrophus
3.1.6.20 ? x * 58813, electrospray ionization mass spectroscopy Paracoccus pantotrophus

Synonyms

EC Number Synonyms Comment Organism
3.1.6.20 SoxB
-
 Paracoccus pantotrophus

Cofactor

EC Number Cofactor Comment Organism Structure
2.8.5.2 cytochrome c SoxXA represents a novel type of periplasmic c-type cytochromes, with SoxX as a monoheme and SoxA as a hybrid diheme cytochrome c Paracoccus pantotrophus
2.8.5.2 heme SoxXA represents a novel type of periplasmic c-type cytochromes, with SoxX as a monoheme and SoxA as a hybrid diheme cytochrome c Paracoccus pantotrophus