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Literature summary extracted from

  • Patel, S.N.; Sharma, M.; Lata, K.; Singh, U.; Kumar, V.; Sangwan, R.S.; Singh, S.P.
    Improved operational stability of D-psicose 3-epimerase by a novel protein engineering strategy, and D-psicose production from fruit and vegetable residues (2016), Biores. Technol., 216, 121-127 .
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
5.1.3.B12 gene dpe, DNA and amino acid sequence determination and analysis, recombinant expression of the engineered chimeric Smt3-D-psicose 3-epimerase conjugate in Escherichia coli strain BL21 Agrobacterium tumefaciens

Protein Variants

EC Number Protein Variants Comment Organism
5.1.3.B12 additional information improved operational stability of D-psicose 3-epimerase by a protein engineering strategy by introduction of a SUMO fusion system, using Saccharomyces cerevisiae Smt3, as the N-terminal tag, which can significantly enhance operational stability and bioconversion efficiency of D-psicose 3-epimerase. The Smt3-D-psicose 3-epimerase conjugate system exhibits relatively better catalytic efficiency, and improved productivity in terms of space-time yields of about 8.5 kg/l/day, it can serve as a catalytic tool for the pilot scale production of the functional sugar, D-psicose, D-psicose production from fruit and vegetable remains and agro-industrial by-products, overview. The bioprocessing leads to achievement of D-psicose production to the extent of 25-35% conversion w/w of D-fructose contained in the sample Agrobacterium tumefaciens

Inhibitors

EC Number Inhibitors Comment Organism Structure
5.1.3.B12 Ca2+ strong inhibition at 1 mM Agrobacterium tumefaciens
5.1.3.B12 Cu2+ almost complete inhibition at 1 mM Agrobacterium tumefaciens
5.1.3.B12 Ni2+ almost complete inhibition at 1 mM Agrobacterium tumefaciens
5.1.3.B12 Zn2+ almost complete inhibition at 1 mM Agrobacterium tumefaciens

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
5.1.3.B12 Co2+ activates strongly at 1 mM Agrobacterium tumefaciens
5.1.3.B12 Mn2+ activates strongly at 1 mM, even low levels of Mn2+ (0.025-0.1 mM) in the assay reaction are sufficient for enhancing the enzyme's activity Agrobacterium tumefaciens
5.1.3.B12 additional information Mg2+, Fe2+ and Ba2+ at 1 mM have no significant effct on the activity Agrobacterium tumefaciens

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
5.1.3.B12 132000
-
recombinant wild-type enzyme, gel filtration Agrobacterium tumefaciens
5.1.3.B12 180000
-
recombinant chimeric Smt3-D-psicose 3-epimerase conjugate, gel filtration Agrobacterium tumefaciens

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
5.1.3.B12 D-psicose Agrobacterium tumefaciens
-
D-fructose
-
r
5.1.3.B12 D-psicose Agrobacterium tumefaciens EHA 105 / NCIM 2942
-
D-fructose
-
r

Organism

EC Number Organism UniProt Comment Textmining
5.1.3.B12 Agrobacterium tumefaciens A9CH28 strain C58 / ATCC 33970
-
5.1.3.B12 Agrobacterium tumefaciens EHA 105 / NCIM 2942 A9CH28 strain C58 / ATCC 33970
-

Purification (Commentary)

EC Number Purification (Comment) Organism
5.1.3.B12 recombinant engineered Smt3-D-psicose 3-epimerase conjugate from Escherichia coli strain BL21 by nickel affinity and anion exchange chromatography Agrobacterium tumefaciens

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
5.1.3.B12 D-psicose
-
Agrobacterium tumefaciens D-fructose
-
r
5.1.3.B12 D-psicose
-
Agrobacterium tumefaciens EHA 105 / NCIM 2942 D-fructose
-
r

Subunits

EC Number Subunits Comment Organism
5.1.3.B12 tetramer 4 * 45000, recombinant chimeric Smt3-D-psicose 3-epimerase conjugate, SDS-PAGE, 4 * 33000, recombinant wild-type enzyme, SDS-PAGE Agrobacterium tumefaciens

Synonyms

EC Number Synonyms Comment Organism
5.1.3.B12 D-psicose-3-epimerase
-
Agrobacterium tumefaciens

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
5.1.3.B12 50
-
recombinant wild-type enzyme Agrobacterium tumefaciens
5.1.3.B12 65
-
recombinant chimeric enzyme Agrobacterium tumefaciens

Temperature Stability [°C]

EC Number Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
5.1.3.B12 50
-
purified recombinant chimeric enzyme, retains 45% of the initial activity after 12 h Agrobacterium tumefaciens

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
5.1.3.B12 8
-
recombinant and native enzyme Agrobacterium tumefaciens

pH Stability

EC Number pH Stability pH Stability Maximum Comment Organism
5.1.3.B12 5 10 purified recombinant chimeric enzyme, retains about 80% of the initial activity after 5 h, completely stable at pH 8.0 Agrobacterium tumefaciens