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Literature summary extracted from
- Identification and functional characterization of sesquiterpene synthases from Xanthium strumarium (2016), Plant Cell Physiol., 57, 630-641 .
Cloned(Commentary)
| EC Number | Cloned (Comment) | Organism |
|---|---|---|
| 4.2.3.75 | expressed in Saccharomyces cerevisiae | Xanthium strumarium |
| 4.2.3.179 | expression in Saccharomyces cerevisiae | Xanthium strumarium |
Protein Variants
| EC Number | Protein Variants | Comment | Organism |
|---|---|---|---|
| 4.2.3.179 | additional information | a deletion of two A bases in the TPS2 cDNA from the Hubei-cultivar, leads to a truncated protein that lacks activity | Xanthium strumarium |
Natural Substrates/ Products (Substrates)
| EC Number | Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 4.2.3.75 | (2E,6E)-farnesyl diphosphate | Xanthium strumarium | - |
(-)-germacrene D + beta-caryophyllene + beta-copaene + diphosphate | - |
? |  |
| 4.2.3.179 | (2E,6E)-farnesyl diphosphate | Xanthium strumarium | - |
guaia-4,6-diene + diphosphate | - |
? | |
Organism
| EC Number | Organism | UniProt | Comment | Textmining |
|---|---|---|---|---|
| 4.2.3.75 | Xanthium strumarium | A0A142BX70 | cultivar Hubei | - |
| 4.2.3.179 | Xanthium strumarium | A0A142BX74 | - |
- |
Source Tissue
| EC Number | Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|---|
| 4.2.3.75 | leaf | - |
Xanthium strumarium | - |
| 4.2.3.75 | stem | - |
Xanthium strumarium | - |
| 4.2.3.179 | leaf | high expression rate | Xanthium strumarium | - |
| 4.2.3.179 | root | low expression rate | Xanthium strumarium | - |
| 4.2.3.179 | stem | high expression rate | Xanthium strumarium | - |
| 4.2.3.179 | trichome | glandular trichome, high expression rate | Xanthium strumarium | - |
Substrates and Products (Substrate)
| EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 4.2.3.75 | (2E,6E)-farnesyl diphosphate | - |
Xanthium strumarium | (-)-germacrene D + beta-caryophyllene + beta-copaene + diphosphate | - |
? | |
| 4.2.3.179 | (2E,6E)-farnesyl diphosphate | - |
Xanthium strumarium | guaia-4,6-diene + diphosphate | - |
? | |
Synonyms
| EC Number | Synonyms | Comment | Organism |
|---|---|---|---|
| 4.2.3.75 | TPS1 | - |
Xanthium strumarium |
| 4.2.3.179 | TPS2 | - |
Xanthium strumarium |
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Release 2023.1 (January 2023)
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