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Literature summary extracted from

  • Hoeven, R.; Hardman, S.J.; Heyes, D.J.; Scrutton, N.S.
    Cross-species analysis of protein dynamics associated with hydride and proton transfer in the catalytic cycle of the light-driven enzyme protochlorophyllide oxidoreductase (2016), Biochemistry, 55, 903-913.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Chlamydomonas reinhardtii
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Zea mays
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Nicotiana tabacum
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Daucus carota
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Physcomitrium patens
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Marchantia paleacea
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Pinus mugo
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Nostoc punctiforme
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Cyanidioschyzon merolae
1.3.1.33 expressed in Escherichia coli BL21(DE3) pLysS cells Lyngbya majuscula

Inhibitors

EC Number Inhibitors Comment Organism Structure
1.3.1.33 protochlorophyllide
-
Chlamydomonas reinhardtii
1.3.1.33 protochlorophyllide
-
Cyanidioschyzon merolae
1.3.1.33 protochlorophyllide
-
Daucus carota
1.3.1.33 protochlorophyllide
-
Lyngbya majuscula
1.3.1.33 protochlorophyllide
-
Marchantia paleacea
1.3.1.33 protochlorophyllide
-
Nicotiana tabacum
1.3.1.33 protochlorophyllide
-
Nostoc punctiforme
1.3.1.33 protochlorophyllide
-
Physcomitrium patens
1.3.1.33 protochlorophyllide
-
Pinus mugo
1.3.1.33 protochlorophyllide
-
Zea mays

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
1.3.1.33 0.0012
-
protochlorophyllide pH and temperature not specified in the publication Cyanidioschyzon merolae
1.3.1.33 0.0013
-
NADPH pH and temperature not specified in the publication Zea mays
1.3.1.33 0.0017
-
protochlorophyllide pH and temperature not specified in the publication Chlamydomonas reinhardtii
1.3.1.33 0.002
-
protochlorophyllide pH and temperature not specified in the publication Nostoc punctiforme
1.3.1.33 0.0022
-
NADPH pH and temperature not specified in the publication Physcomitrium patens
1.3.1.33 0.0023
-
protochlorophyllide pH and temperature not specified in the publication Physcomitrium patens
1.3.1.33 0.0023
-
protochlorophyllide pH and temperature not specified in the publication Marchantia paleacea
1.3.1.33 0.0024
-
protochlorophyllide pH and temperature not specified in the publication Pinus mugo
1.3.1.33 0.0043
-
protochlorophyllide pH and temperature not specified in the publication Nicotiana tabacum
1.3.1.33 0.0048
-
NADPH pH and temperature not specified in the publication Nostoc punctiforme
1.3.1.33 0.0055
-
protochlorophyllide pH and temperature not specified in the publication Daucus carota
1.3.1.33 0.0059
-
NADPH pH and temperature not specified in the publication Nicotiana tabacum
1.3.1.33 0.0077
-
protochlorophyllide pH and temperature not specified in the publication Zea mays
1.3.1.33 0.0078
-
protochlorophyllide pH and temperature not specified in the publication Lyngbya majuscula
1.3.1.33 0.0098
-
NADPH pH and temperature not specified in the publication Pinus mugo
1.3.1.33 0.0578
-
NADPH pH and temperature not specified in the publication Lyngbya majuscula
1.3.1.33 0.124
-
NADPH pH and temperature not specified in the publication Daucus carota
1.3.1.33 0.138
-
NADPH pH and temperature not specified in the publication Marchantia paleacea
1.3.1.33 0.157
-
NADPH pH and temperature not specified in the publication Chlamydomonas reinhardtii
1.3.1.33 0.172
-
NADPH pH and temperature not specified in the publication Cyanidioschyzon merolae

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.3.1.33 protochlorophyllide + NADPH + H+ Chlamydomonas reinhardtii
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Zea mays
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Nicotiana tabacum
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Daucus carota
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Physcomitrium patens
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Marchantia paleacea
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Pinus mugo
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Nostoc punctiforme
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Cyanidioschyzon merolae
-
chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+ Lyngbya majuscula
-
chlorophyllide a + NADP+
-
?

Organism

EC Number Organism UniProt Comment Textmining
1.3.1.33 Chlamydomonas reinhardtii
-
-
-
1.3.1.33 Cyanidioschyzon merolae
-
-
-
1.3.1.33 Daucus carota
-
-
-
1.3.1.33 Lyngbya majuscula
-
-
-
1.3.1.33 Marchantia paleacea
-
-
-
1.3.1.33 Nicotiana tabacum
-
-
-
1.3.1.33 Nostoc punctiforme
-
-
-
1.3.1.33 Physcomitrium patens
-
-
-
1.3.1.33 Pinus mugo
-
-
-
1.3.1.33 Zea mays
-
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.3.1.33 protochlorophyllide + NADPH + H+
-
Chlamydomonas reinhardtii chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Zea mays chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Nicotiana tabacum chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Daucus carota chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Physcomitrium patens chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Marchantia paleacea chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Pinus mugo chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Nostoc punctiforme chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Cyanidioschyzon merolae chlorophyllide a + NADP+
-
?
1.3.1.33 protochlorophyllide + NADPH + H+
-
Lyngbya majuscula chlorophyllide a + NADP+
-
?

Synonyms

EC Number Synonyms Comment Organism
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Chlamydomonas reinhardtii
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Zea mays
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Nicotiana tabacum
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Daucus carota
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Physcomitrium patens
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Marchantia paleacea
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Pinus mugo
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Nostoc punctiforme
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Cyanidioschyzon merolae
1.3.1.33 light-driven enzyme protochlorophyllide oxidoreductase
-
Lyngbya majuscula
1.3.1.33 POR
-
Chlamydomonas reinhardtii
1.3.1.33 POR
-
Zea mays
1.3.1.33 POR
-
Nicotiana tabacum
1.3.1.33 POR
-
Daucus carota
1.3.1.33 POR
-
Physcomitrium patens
1.3.1.33 POR
-
Marchantia paleacea
1.3.1.33 POR
-
Pinus mugo
1.3.1.33 POR
-
Nostoc punctiforme
1.3.1.33 POR
-
Cyanidioschyzon merolae
1.3.1.33 POR
-
Lyngbya majuscula

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
1.3.1.33 0.017
-
NADPH pH and temperature not specified in the publication Nicotiana tabacum
1.3.1.33 0.019
-
NADPH pH and temperature not specified in the publication Physcomitrium patens
1.3.1.33 0.019
-
NADPH pH and temperature not specified in the publication Marchantia paleacea
1.3.1.33 0.02
-
NADPH pH and temperature not specified in the publication Pinus mugo
1.3.1.33 0.026
-
NADPH pH and temperature not specified in the publication Zea mays
1.3.1.33 0.035
-
NADPH pH and temperature not specified in the publication Nostoc punctiforme
1.3.1.33 0.042
-
NADPH pH and temperature not specified in the publication Cyanidioschyzon merolae
1.3.1.33 0.043
-
NADPH pH and temperature not specified in the publication Chlamydomonas reinhardtii
1.3.1.33 0.058
-
NADPH pH and temperature not specified in the publication Daucus carota
1.3.1.33 0.102
-
NADPH pH and temperature not specified in the publication Lyngbya majuscula

Cofactor

EC Number Cofactor Comment Organism Structure
1.3.1.33 NADPH
-
Chlamydomonas reinhardtii
1.3.1.33 NADPH
-
Zea mays
1.3.1.33 NADPH
-
Nicotiana tabacum
1.3.1.33 NADPH
-
Daucus carota
1.3.1.33 NADPH
-
Physcomitrium patens
1.3.1.33 NADPH
-
Marchantia paleacea
1.3.1.33 NADPH
-
Pinus mugo
1.3.1.33 NADPH
-
Nostoc punctiforme
1.3.1.33 NADPH
-
Cyanidioschyzon merolae
1.3.1.33 NADPH
-
Lyngbya majuscula

Ki Value [mM]

EC Number Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
1.3.1.33 0.00215
-
protochlorophyllide pH and temperature not specified in the publication Nicotiana tabacum
1.3.1.33 0.00322
-
protochlorophyllide pH and temperature not specified in the publication Zea mays
1.3.1.33 0.0073
-
protochlorophyllide pH and temperature not specified in the publication Pinus mugo