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Literature summary extracted from

  • Santos, S.C.; Alviano, D.S.; Alviano, C.S.; Padula, M.; Leitao, A.C.; Martins, O.B.; Ribeiro, C.M.; Sassaki, M.Y.; Matta, C.P.; Bevilaqua, J.; Sebastian, G.V.; Seldin, L.
    Characterization of Gordonia sp. strain F.5.25.8 capable of dibenzothiophene desulfurization and carbazole utilization (2006), Appl. Microbiol. Biotechnol., 71, 355-362.
    View publication on PubMed

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.14.14.21 dibenzothiophene + 2 FMNH2 + 2 O2 Gordonia sp.
-
 dibenzothiophene-5,5-dioxide + 2 FMN + 2 H2O
-
 ?
1.14.14.21 dibenzothiophene + 2 FMNH2 + 2 O2 Gordonia sp. F.5.25.8
-
 dibenzothiophene-5,5-dioxide + 2 FMN + 2 H2O
-
 ?
1.14.14.22 dibenzothiophene-5,5-dioxide + 2 FMNH2 + O2 Gordonia sp.
-
 2'-hydroxybiphenyl-2-sulfinate + 2 FMN + H2O
-
 ?
1.14.14.22 dibenzothiophene-5,5-dioxide + 2 FMNH2 + O2 Gordonia sp. F.5.25.8
-
 2'-hydroxybiphenyl-2-sulfinate + 2 FMN + H2O
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
1.14.14.21 Gordonia sp.
-
-
-
1.14.14.21 Gordonia sp. F.5.25.8
-
-
-
1.14.14.22 Gordonia sp.
-
-
-
1.14.14.22 Gordonia sp. F.5.25.8
-
-
-

Source Tissue

EC Number Source Tissue Comment Organism Textmining
1.14.14.21 additional information strain F.5.25.8 grows at 37-40°C Gordonia sp.
-
1.14.14.22 additional information strain F.5.25.8 grows at 37-40°C Gordonia sp.
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.14.14.21 dibenzothiophene + 2 FMNH2 + 2 O2
-
 Gordonia sp. dibenzothiophene-5,5-dioxide + 2 FMN + 2 H2O
-
 ?
1.14.14.21 dibenzothiophene + 2 FMNH2 + 2 O2
-
 Gordonia sp. F.5.25.8 dibenzothiophene-5,5-dioxide + 2 FMN + 2 H2O
-
 ?
1.14.14.22 dibenzothiophene-5,5-dioxide + 2 FMNH2 + O2
-
 Gordonia sp. 2'-hydroxybiphenyl-2-sulfinate + 2 FMN + H2O
-
 ?
1.14.14.22 dibenzothiophene-5,5-dioxide + 2 FMNH2 + O2
-
 Gordonia sp. F.5.25.8 2'-hydroxybiphenyl-2-sulfinate + 2 FMN + H2O
-
 ?

Cofactor

EC Number Cofactor Comment Organism Structure
1.14.14.21 FMNH2
-
 Gordonia sp.
1.14.14.22 FMNH2
-
 Gordonia sp.

General Information

EC Number General Information Comment Organism
1.14.14.21 metabolism dibenzothiophene is converted to 2'-hydroxybiphenyl-2-sulfinate by ec1.14.14.21 and 1.14.14.22 in strain F.5.25.8, and the 2'-hydroxybiphenyl-2-sulfinate concentration does not decrease during the stationary phase. Although the production of 2'-hydroxybiphenyl-2-sulfinate appears to proceed in parallel with the increase in biomass, the relationship between the decrease in dibenzothiophene and increase in 2'-hydroxybiphenyl-2-sulfinate does not seem stoichiometric due to the volatile nature of 2'-hydroxybiphenyl-2-sulfinate Gordonia sp.
1.14.14.22 metabolism dibenzothiophene is converted to 2'-hydroxybiphenyl-2-sulfinate by ec1.14.14.21 and 1.14.14.22 in strain F.5.25.8, and the 2'-hydroxybiphenyl-2-sulfinate concentration does not decrease during the stationary phase. Although the production of 2'-hydroxybiphenyl-2-sulfinate appears to proceed in parallel with the increase in biomass, the relationship between the decrease in dibenzothiophene and increase in 2'-hydroxybiphenyl-2-sulfinate does not seem stoichiometricdue to the volatile nature of 2'-hydroxybiphenyl-2-sulfinate Gordonia sp.