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Literature summary extracted from

  • Oehlenschlaeger, C.B.; L?vgreen, M.N.; Reinauer, E.; Lehtinen, E.; Pind, M.L.; Harris, P.; Martinussen, J.; Willemoes, M.
    Bacillus halodurans strain C125 encodes and synthesizes enzymes from both known pathways to form dump directly from cytosine deoxyribonucleotides (2015), Appl. Environ. Microbiol., 81, 3395-3404.
    View publication on PubMedView publication on EuropePMC

Activating Compound

EC Number Activating Compound Comment Organism Structure
3.5.4.13 dCTP
-
Halalkalibacterium halodurans

Cloned(Commentary)

EC Number Cloned (Comment) Organism
3.5.4.13 expressed in Escherichia coli BL21(DE3) cells Halalkalibacterium halodurans
3.5.4.30 expressed in Escherichia coli BL21(DE3) cells Halalkalibacterium halodurans

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
3.5.4.13 in complex with dTTP, hanging drop vapor diffusion method, using 200 mM lithium citrate and 20% (w/v) polyethylene glycol 4000 Halalkalibacterium halodurans
3.5.4.30 in complex with dTTP, hanging drop vapor diffusion method, using 200 mM lithium citrate and 20% (w/v) polyethylene glycol 4000 Halalkalibacterium halodurans

Inhibitors

EC Number Inhibitors Comment Organism Structure
3.5.4.13 dTTP
-
Halalkalibacterium halodurans
3.5.4.30 dTTP
-
Halalkalibacterium halodurans

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
3.5.4.13 dCTP + H2O Halalkalibacterium halodurans
-
dUTP + NH3
-
?
3.5.4.13 dCTP + H2O Halalkalibacterium halodurans C-125
-
dUTP + NH3
-
?
3.5.4.30 dCTP + H2O Halalkalibacterium halodurans
-
dUMP + diphosphate + NH3
-
?
3.5.4.30 dCTP + H2O Halalkalibacterium halodurans C-125
-
dUMP + diphosphate + NH3
-
?

Organism

EC Number Organism UniProt Comment Textmining
3.5.4.13 Halalkalibacterium halodurans Q9KFV3
-
-
3.5.4.13 Halalkalibacterium halodurans C-125 Q9KFV3
-
-
3.5.4.30 Halalkalibacterium halodurans Q9KFV3
-
-
3.5.4.30 Halalkalibacterium halodurans C-125 Q9KFV3
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
3.5.4.13 ammonium sulfate precipitation and DE-52 anion-exchange column chromatography Halalkalibacterium halodurans
3.5.4.30 ammonium sulfate precipitation and DE-52 anion-exchange column chromatography Halalkalibacterium halodurans

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3.5.4.13 dCTP + H2O
-
Halalkalibacterium halodurans dUTP + NH3
-
?
3.5.4.13 dCTP + H2O
-
Halalkalibacterium halodurans C-125 dUTP + NH3
-
?
3.5.4.30 dCTP + H2O
-
Halalkalibacterium halodurans dUMP + diphosphate + NH3
-
?
3.5.4.30 dCTP + H2O
-
Halalkalibacterium halodurans C-125 dUMP + diphosphate + NH3
-
?

Subunits

EC Number Subunits Comment Organism
3.5.4.30 homotrimer x-ray crystallography Halalkalibacterium halodurans

Synonyms

EC Number Synonyms Comment Organism
3.5.4.13 DCD:DUT bifunctional enzyme with dCTP deaminase and dUTPase activities Halalkalibacterium halodurans
3.5.4.13 dcdB
-
Halalkalibacterium halodurans
3.5.4.30 DCD:DUT bifunctional enzyme with dCTP deaminase and dUTPase activities Halalkalibacterium halodurans
3.5.4.30 dcdB
-
Halalkalibacterium halodurans