EC Number | Cloned (Comment) | Organism |
---|---|---|
3.4.14.13 | - |
Bacillus subtilis |
5.1.1.20 | - |
Bacillus subtilis |
5.1.1.20 | - |
Escherichia coli |
EC Number | KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
3.4.14.13 | 0.12 | - |
L-Ala-gamma-D-Glu-L-Lys-D-Ala | pH and temperature not specified in the publication | Bacillus subtilis | |
3.4.14.13 | 0.29 | - |
L-Ala-gamma-D-Glu-L-Lys | pH and temperature not specified in the publication | Bacillus subtilis | |
3.4.14.13 | 0.31 | - |
L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala | pH and temperature not specified in the publication | Bacillus subtilis | |
5.1.1.20 | 0.028 | - |
L-Ala-D-Asp | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 0.13 | - |
L-Ala-D-Glu | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 0.19 | - |
L-Ala-D-Asp | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 0.32 | - |
L-Ala-D-Glu | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 0.51 | - |
L-Ala-D-Met | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 0.69 | - |
L-Ala-D-Met | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 1.8 | - |
L-Ala-D-Gln | pH 8.5, 37°C | Escherichia coli |
EC Number | Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|---|
5.1.1.20 | 34955 | - |
x * 34955, calculated from sequence | Escherichia coli |
5.1.1.20 | 34994 | - |
x * 34994, electrospray ionization mass spectrometry | Escherichia coli |
5.1.1.20 | 39472 | - |
x * 39472, calculated from sequence | Bacillus subtilis |
5.1.1.20 | 39500 | - |
x * 39500, electrospray ionization mass spectrometry | Bacillus subtilis |
EC Number | Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|---|
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala + H2O | Bacillus subtilis | the enzyme from is involved in the recycling of the murein peptide | L-Ala-D-Glu + L-Lys-D-Ala-D-Ala | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala + H2O | Bacillus subtilis 168 | the enzyme from is involved in the recycling of the murein peptide | L-Ala-D-Glu + L-Lys-D-Ala-D-Ala | - |
? | |
5.1.1.20 | L-Ala-D-Glu | Bacillus subtilis | the enzyme is involved in the recycling of the murein peptide, of which L-Ala-D-Glu is a component. The murein hydrolases degrade peptidoglycan to the final dipeptide L-Ala-D-Glu. If L-Ala-D-Glu is epimerized to L-Ala-L-Glu, hydrolysis can occur with bacterial dipeptidases | L-Ala-L-Glu | - |
r |
EC Number | Organism | UniProt | Comment | Textmining |
---|---|---|---|---|
3.4.14.13 | Bacillus subtilis | O35010 | - |
- |
3.4.14.13 | Bacillus subtilis 168 | O35010 | - |
- |
5.1.1.20 | Bacillus subtilis | O34508 | - |
- |
5.1.1.20 | Escherichia coli | P51981 | - |
- |
EC Number | Purification (Comment) | Organism |
---|---|---|
3.4.14.13 | His-tagged enzyme | Bacillus subtilis |
5.1.1.20 | - |
Bacillus subtilis |
5.1.1.20 | - |
Escherichia coli |
EC Number | Storage Stability | Organism |
---|---|---|
3.4.14.13 | -20°C, 40% glycerol, significant loss of activity | Bacillus subtilis |
3.4.14.13 | 4°C, stable in absence of glycerol for 48h | Bacillus subtilis |
EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|---|
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys + H2O | - |
Bacillus subtilis | L-Ala-D-Glu + L-Lys | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys + H2O | - |
Bacillus subtilis 168 | L-Ala-D-Glu + L-Lys | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala + H2O | - |
Bacillus subtilis | L-Ala-D-Glu + L-Lys-D-Ala | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala + H2O | - |
Bacillus subtilis 168 | L-Ala-D-Glu + L-Lys-D-Ala | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala + H2O | the enzyme from is involved in the recycling of the murein peptide | Bacillus subtilis | L-Ala-D-Glu + L-Lys-D-Ala-D-Ala | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala + H2O | the enzyme is specific for the gamma-D-Glu-L-Lys bond. No activity with L-Ala-D-Glu-L-Lys-D-Ala-D-Ala or L-Ala-gamma-L-Glu-L-Lys-D-Ala-D-Ala | Bacillus subtilis | L-Ala-D-Glu + L-Lys-D-Ala-D-Ala | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala + H2O | the enzyme from is involved in the recycling of the murein peptide | Bacillus subtilis 168 | L-Ala-D-Glu + L-Lys-D-Ala-D-Ala | - |
? | |
3.4.14.13 | L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala + H2O | the enzyme is specific for the gamma-D-Glu-L-Lys bond. No activity with L-Ala-D-Glu-L-Lys-D-Ala-D-Ala or L-Ala-gamma-L-Glu-L-Lys-D-Ala-D-Ala | Bacillus subtilis 168 | L-Ala-D-Glu + L-Lys-D-Ala-D-Ala | - |
? | |
5.1.1.20 | Gly-L-Glu | - |
Escherichia coli | Gly-D-Glu | - |
r | |
5.1.1.20 | L-Ala-D-Asp | - |
Bacillus subtilis | L-Ala-L-Asp | - |
r | |
5.1.1.20 | L-Ala-D-Asp | - |
Escherichia coli | L-Ala-L-Asp | - |
r | |
5.1.1.20 | L-Ala-D-Gln | - |
Escherichia coli | L-Ala-L-Gln | - |
r | |
5.1.1.20 | L-Ala-D-Glu | - |
Bacillus subtilis | L-Ala-L-Glu | - |
r | |
5.1.1.20 | L-Ala-D-Glu | - |
Escherichia coli | L-Ala-L-Glu | - |
r | |
5.1.1.20 | L-Ala-D-Glu | the enzyme is involved in the recycling of the murein peptide, of which L-Ala-D-Glu is a component. The murein hydrolases degrade peptidoglycan to the final dipeptide L-Ala-D-Glu. If L-Ala-D-Glu is epimerized to L-Ala-L-Glu, hydrolysis can occur with bacterial dipeptidases | Bacillus subtilis | L-Ala-L-Glu | - |
r | |
5.1.1.20 | L-Ala-D-Met | - |
Bacillus subtilis | L-Ala-L-Met | - |
r | |
5.1.1.20 | L-Ala-D-Met | - |
Escherichia coli | L-Ala-L-Met | - |
r | |
5.1.1.20 | L-Ala-L-Ala | - |
Escherichia coli | L-Ala-D-Ala | - |
r | |
5.1.1.20 | L-Ala-L-Asn | - |
Escherichia coli | L-Ala-D-Asn | - |
r | |
5.1.1.20 | L-Ala-L-Asp | - |
Bacillus subtilis | L-Ala-D-Asp | - |
r | |
5.1.1.20 | L-Ala-L-Asp | - |
Escherichia coli | L-Ala-D-Asp | - |
r | |
5.1.1.20 | L-Ala-L-Gln | - |
Escherichia coli | L-Ala-D-Gln | - |
r | |
5.1.1.20 | L-Ala-L-Glu | - |
Bacillus subtilis | L-Ala-D-Glu | - |
r | |
5.1.1.20 | L-Ala-L-Glu | - |
Escherichia coli | L-Ala-D-Glu | - |
r | |
5.1.1.20 | L-Ala-L-His | L-Ala-L-His is epimerized by YcjG at pH 8 but not at pH 6 | Escherichia coli | L-Ala-D-His | - |
r | |
5.1.1.20 | L-Ala-L-Ile | - |
Escherichia coli | L-Ala-D-Ile | - |
r | |
5.1.1.20 | L-Ala-L-Leu | - |
Bacillus subtilis | L-Ala-D-Leu | - |
r | |
5.1.1.20 | L-Ala-L-Leu | - |
Escherichia coli | L-Ala-D-Leu | - |
r | |
5.1.1.20 | L-Ala-L-Met | - |
Bacillus subtilis | L-Ala-D-Met | - |
r | |
5.1.1.20 | L-Ala-L-Met | - |
Escherichia coli | L-Ala-D-Met | - |
r | |
5.1.1.20 | L-Ala-L-Phe | - |
Escherichia coli | L-Ala-D-Phe | - |
r | |
5.1.1.20 | L-Ala-L-Ser | - |
Bacillus subtilis | L-Ala-D-Ser | - |
r | |
5.1.1.20 | L-Ala-L-Ser | - |
Escherichia coli | L-Ala-D-Ser | - |
r | |
5.1.1.20 | L-Ala-L-Thr | - |
Escherichia coli | L-Ala-D-Thr | - |
r | |
5.1.1.20 | L-Ala-L-Trp | - |
Escherichia coli | L-Ala-D-Trp | - |
r | |
5.1.1.20 | L-Ala-L-Tyr | - |
Escherichia coli | L-Ala-D-Tyr | - |
r | |
5.1.1.20 | L-Ala-L-Val | - |
Escherichia coli | L-Ala-D-Val | - |
r | |
5.1.1.20 | L-Phe-L-Glu | - |
Escherichia coli | L-Phe-D-Glu | - |
r | |
5.1.1.20 | L-Pro-L-Glu | - |
Bacillus subtilis | L-Pro-D-Glu | - |
r | |
5.1.1.20 | L-Ser-L-Glu | - |
Bacillus subtilis | L-Ser-D-Glu | - |
r | |
5.1.1.20 | L-Ser-L-Glu | - |
Escherichia coli | L-Ser-D-Glu | - |
r | |
5.1.1.20 | additional information | no activity with L-Ala-L-Arg, L-Ala-L-Lys, L-Ala-L-Pro, L-Glu-L-Glu, L-Lys-L-Glu, L-Pro-L-Glu, L-Lys-L-Ala, or D-Ala-D-Ala | Bacillus subtilis | ? | - |
? | |
5.1.1.20 | additional information | no activity with L-Ala-L-Arg, L-Ala-L-Lys, L-Ala-L-Pro, L-Glu-L-Glu, L-Lys-L-Glu, L-Pro-L-Glu, L-Lys-L-Ala, or D-Ala-D-Ala | Escherichia coli | ? | - |
? |
EC Number | Subunits | Comment | Organism |
---|---|---|---|
5.1.1.20 | ? | x * 34955, calculated from sequence | Escherichia coli |
5.1.1.20 | ? | x * 34994, electrospray ionization mass spectrometry | Escherichia coli |
5.1.1.20 | ? | x * 39472, calculated from sequence | Bacillus subtilis |
5.1.1.20 | ? | x * 39500, electrospray ionization mass spectrometry | Bacillus subtilis |
EC Number | Synonyms | Comment | Organism |
---|---|---|---|
3.4.14.13 | gamma-D-glutamyl-L-lysine endopeptidase | - |
Bacillus subtilis |
3.4.14.13 | YkfC | - |
Bacillus subtilis |
5.1.1.20 | AEE | - |
Bacillus subtilis |
5.1.1.20 | YcjG | - |
Escherichia coli |
5.1.1.20 | YkfB | - |
Bacillus subtilis |
EC Number | Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|---|
3.4.14.13 | 37 | - |
assay at | Bacillus subtilis |
5.1.1.20 | 37 | - |
assay at | Bacillus subtilis |
5.1.1.20 | 37 | - |
assay at | Escherichia coli |
EC Number | Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
3.4.14.13 | 1.2 | - |
L-Ala-gamma-D-Glu-L-Lys | pH and temperature not specified in the publication | Bacillus subtilis | |
3.4.14.13 | 2.6 | - |
L-Ala-gamma-D-Glu-L-Lys-D-Ala | pH and temperature not specified in the publication | Bacillus subtilis | |
3.4.14.13 | 5.7 | - |
L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala | pH and temperature not specified in the publication | Bacillus subtilis | |
5.1.1.20 | 0.053 | - |
L-Ala-D-Asp | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 1.1 | - |
L-Ala-D-Met | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 1.9 | - |
L-Ala-D-Met | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 3.3 | - |
L-Ala-D-Gln | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 10 | - |
L-Ala-D-Glu | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 15 | - |
L-Ala-D-Glu | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 17 | - |
L-Ala-D-Asp | pH 8.5, 37°C | Escherichia coli |
EC Number | pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|---|
3.4.14.13 | 8.5 | - |
assay at | Bacillus subtilis |
5.1.1.20 | 8.5 | - |
assay at | Bacillus subtilis |
5.1.1.20 | 8.5 | - |
assay at | Escherichia coli |
EC Number | General Information | Comment | Organism |
---|---|---|---|
3.4.14.13 | physiological function | the enzyme is involved in the recycling of the murein peptide | Bacillus subtilis |
5.1.1.20 | physiological function | the enzyme is involved in the recycling of the murein peptide, of which L-Ala-D-Glu is a component | Bacillus subtilis |
5.1.1.20 | physiological function | the enzyme is involved in the recycling of the murein peptide, of which L-Ala-D-Glu is a component | Escherichia coli |
EC Number | kcat/KM Value [1/mMs-1] | kcat/KM Value Maximum [1/mMs-1] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
3.4.14.13 | 4.1 | - |
L-Ala-gamma-D-Glu-L-Lys | pH and temperature not specified in the publication | Bacillus subtilis | |
3.4.14.13 | 18 | - |
L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala | pH and temperature not specified in the publication | Bacillus subtilis | |
3.4.14.13 | 22 | - |
L-Ala-gamma-D-Glu-L-Lys-D-Ala | pH and temperature not specified in the publication | Bacillus subtilis | |
5.1.1.20 | 1.8 | - |
L-Ala-D-Gln | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 1.9 | - |
L-Ala-D-Asp | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 2.2 | - |
L-Ala-D-Met | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 2.8 | - |
L-Ala-D-Met | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 47 | - |
L-Ala-D-Glu | pH 8.5, 37°C | Bacillus subtilis | |
5.1.1.20 | 77 | - |
L-Ala-D-Glu | pH 8.5, 37°C | Escherichia coli | |
5.1.1.20 | 89 | - |
L-Ala-D-Asp | pH 8.5, 37°C | Escherichia coli |