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Literature summary extracted from

  • Matsumura, H.; Mizohata, E.; Ishida, H.; Kogami, A.; Ueno, T.; Makino, A.; Inoue, T.; Yokota, A.; Mae, T.; Kai, Y.
    Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate (2012), J. Mol. Biol., 422, 75-86.
    View publication on PubMed

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
4.1.1.39 in complex with NADPH, 6-phosphogluconate, or 2-carboxy-D-arabinitol 1,5-bisphosphate, hanging drop vapor diffusion method, using 75 mM HEPES-KOH (pH 7.75 at 20°C), 9% (w/v) polyethylene glycol 4000, and 25% (v/v) glycerol Oryza sativa

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
4.1.1.39 chloroplast
-
 Oryza sativa 9507
-

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
4.1.1.39 Mg2+ required Oryza sativa

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
4.1.1.39 15000
-
 8 * 55000 + 8 * 15000, calculated from amino acid sequence Oryza sativa
4.1.1.39 55000
-
 8 * 55000 + 8 * 15000, calculated from amino acid sequence Oryza sativa

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Oryza sativa
-
 3-phospho-D-glycerate + H+
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Oryza sativa P0C512 and Q0INY7 large and small subunit; cultivar Notohikari
-

Purification (Commentary)

EC Number Purification (Comment) Organism
4.1.1.39 Superdex 200 gel filtration Oryza sativa

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Oryza sativa 3-phospho-D-glycerate + H+
-
 ?

Subunits

EC Number Subunits Comment Organism
4.1.1.39 heterohexadecamer 8 * 55000 + 8 * 15000, calculated from amino acid sequence Oryza sativa

Synonyms

EC Number Synonyms Comment Organism
4.1.1.39 D-ribulose 1,5-bisphosphate carboxylase/oxygenase
-
 Oryza sativa
4.1.1.39 Rubisco
-
 Oryza sativa