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Literature summary extracted from

  • Stokes, S.S.; Huynh, H.; Gowravaram, M.; Albert, R.; Cavero-Tomas, M.; Chen, B.; Harang, J.; Loch, J.T.; Lu, M.; Mullen, G.B.; Zhao, S.; Liu, C.F.; Mills, S.D.
    Discovery of bacterial NAD+-dependent DNA ligase inhibitors: optimization of antibacterial activity (2011), Bioorg. Med. Chem. Lett., 21, 4556-4560.
    View publication on PubMed

Cloned(Commentary)

EC Number Cloned (Comment) Organism
6.5.1.2 recombinantly expressed Staphylococcus aureus
6.5.1.2 recombinantly expressed Streptococcus pneumoniae

Inhibitors

EC Number Inhibitors Comment Organism Structure
6.5.1.2 2-(butylsulfanyl)-5'-deoxyadenosine
-
 Staphylococcus aureus
6.5.1.2 2-(butylsulfanyl)-5'-deoxyadenosine
-
 Streptococcus pneumoniae
6.5.1.2 2-(butylsulfanyl)adenosine
-
 Staphylococcus aureus
6.5.1.2 2-(butylsulfanyl)adenosine
-
 Streptococcus pneumoniae
6.5.1.2 2-(cyclobutylmethoxy)-5'-deoxy-5'-fluoroadenosine
-
 Staphylococcus aureus
6.5.1.2 2-(cyclobutylmethoxy)-5'-deoxy-5'-fluoroadenosine
-
 Streptococcus pneumoniae
6.5.1.2 2-(cyclopentyloxy)-5'-deoxy-3'-O-(3,4-dichlorobenzyl)adenosine
-
 Staphylococcus aureus
6.5.1.2 2-(cyclopentyloxy)-5'-deoxy-3'-O-(3,4-dichlorobenzyl)adenosine
-
 Streptococcus pneumoniae
6.5.1.2 2-(cyclopentyloxy)-9-[3,5-dideoxy-5-fluoro-3-(2l5-triaz-1-en-2-yn-1-yl)-b-D-xylofuranosyl]-9H-purin-6-amine
-
 Staphylococcus aureus
6.5.1.2 2-(cyclopentyloxy)-9-[3,5-dideoxy-5-fluoro-3-(2l5-triaz-1-en-2-yn-1-yl)-b-D-xylofuranosyl]-9H-purin-6-amine
-
 Streptococcus pneumoniae
6.5.1.2 2-(pentyloxy)adenosine
-
 Staphylococcus aureus
6.5.1.2 2-(pentyloxy)adenosine
-
 Streptococcus pneumoniae
6.5.1.2 2-(pentylsulfanyl)adenosine
-
 Staphylococcus aureus
6.5.1.2 2-(pentylsulfanyl)adenosine
-
 Streptococcus pneumoniae
6.5.1.2 5'-deoxy-2-(pentyloxy)adenosine
-
 Staphylococcus aureus
6.5.1.2 5'-deoxy-2-(pentyloxy)adenosine
-
 Streptococcus pneumoniae
6.5.1.2 5'-deoxy-2-phenoxyadenosine
-
 Staphylococcus aureus
6.5.1.2 5'-deoxy-2-phenoxyadenosine
-
 Streptococcus pneumoniae
6.5.1.2 5'-deoxy-2-[(trans-4-methylcyclohexyl)oxy]adenosine
-
 Staphylococcus aureus
6.5.1.2 5'-deoxy-2-[(trans-4-methylcyclohexyl)oxy]adenosine
-
 Streptococcus pneumoniae
6.5.1.2 5'-deoxy-5'-fluoro-2-(pentyloxy)adenosine
-
 Staphylococcus aureus
6.5.1.2 5'-deoxy-5'-fluoro-2-(pentyloxy)adenosine
-
 Streptococcus pneumoniae
6.5.1.2 5'-deoxy-5'-fluoro-2-[[1-(hydroxymethyl)cyclopropyl]methoxy]adenosine
-
 Staphylococcus aureus
6.5.1.2 5'-deoxy-5'-fluoro-2-[[1-(hydroxymethyl)cyclopropyl]methoxy]adenosine
-
 Streptococcus pneumoniae
6.5.1.2 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
-
 Staphylococcus aureus
6.5.1.2 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
-
 Streptococcus pneumoniae
6.5.1.2 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(spiro[2.2]pent-1-ylmethoxy)-9H-purin-6-amine
-
 Staphylococcus aureus
6.5.1.2 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(spiro[2.2]pent-1-ylmethoxy)-9H-purin-6-amine
-
 Streptococcus pneumoniae
6.5.1.2 9-(3-chloro-3-deoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
-
 Staphylococcus aureus
6.5.1.2 9-(3-chloro-3-deoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
-
 Streptococcus pneumoniae

Organism

EC Number Organism UniProt Comment Textmining
6.5.1.2 Staphylococcus aureus
-
-
-
6.5.1.2 Streptococcus pneumoniae
-
-
-

Synonyms

EC Number Synonyms Comment Organism
6.5.1.2 LigA
-
 Staphylococcus aureus
6.5.1.2 LigA
-
 Streptococcus pneumoniae
6.5.1.2 NAD+-dependent DNA ligase
-
 Staphylococcus aureus
6.5.1.2 NAD+-dependent DNA ligase
-
 Streptococcus pneumoniae

IC50 Value

EC Number IC50 Value IC50 Value Maximum Comment Organism Inhibitor Structure
6.5.1.2 0.00001
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 2-(cyclopentyloxy)-5'-deoxy-3'-O-(3,4-dichlorobenzyl)adenosine
6.5.1.2 0.00002
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(spiro[2.2]pent-1-ylmethoxy)-9H-purin-6-amine
6.5.1.2 0.00003
-
 pH and temperature not specified in the publication Staphylococcus aureus 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(spiro[2.2]pent-1-ylmethoxy)-9H-purin-6-amine
6.5.1.2 0.00004
-
 pH and temperature not specified in the publication Staphylococcus aureus 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
6.5.1.2 0.00004
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 9-(3-chloro-3,5-dideoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
6.5.1.2 0.00005
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 2-(cyclobutylmethoxy)-5'-deoxy-5'-fluoroadenosine
6.5.1.2 0.00005
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 5'-deoxy-2-[(trans-4-methylcyclohexyl)oxy]adenosine
6.5.1.2 0.00006
-
 pH and temperature not specified in the publication Staphylococcus aureus 2-(cyclobutylmethoxy)-5'-deoxy-5'-fluoroadenosine
6.5.1.2 0.00007
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 2-(cyclopentyloxy)-9-[3,5-dideoxy-5-fluoro-3-(2l5-triaz-1-en-2-yn-1-yl)-b-D-xylofuranosyl]-9H-purin-6-amine
6.5.1.2 0.00008
-
 pH and temperature not specified in the publication Staphylococcus aureus 2-(butylsulfanyl)adenosine
6.5.1.2 0.00008
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 5'-deoxy-2-(pentyloxy)adenosine
6.5.1.2 0.00008
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 9-(3-chloro-3-deoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
6.5.1.2 0.00009
-
 pH and temperature not specified in the publication Staphylococcus aureus 2-(cyclopentyloxy)-9-[3,5-dideoxy-5-fluoro-3-(2l5-triaz-1-en-2-yn-1-yl)-b-D-xylofuranosyl]-9H-purin-6-amine
6.5.1.2 0.00011
-
 pH and temperature not specified in the publication Staphylococcus aureus 9-(3-chloro-3-deoxy-beta-D-xylofuranosyl)-2-(cyclopentyloxy)-9H-purin-6-amine
6.5.1.2 0.00012
-
 pH and temperature not specified in the publication Staphylococcus aureus 5'-deoxy-5'-fluoro-2-(pentyloxy)adenosine
6.5.1.2 0.00012
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 5'-deoxy-5'-fluoro-2-(pentyloxy)adenosine
6.5.1.2 0.00012
-
 pH and temperature not specified in the publication Staphylococcus aureus 5'-deoxy-2-(pentyloxy)adenosine
6.5.1.2 0.00013
-
 pH and temperature not specified in the publication Staphylococcus aureus 2-(cyclopentyloxy)-5'-deoxy-3'-O-(3,4-dichlorobenzyl)adenosine
6.5.1.2 0.00013
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 2-(butylsulfanyl)-5'-deoxyadenosine
6.5.1.2 0.00014
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 2-(butylsulfanyl)adenosine
6.5.1.2 0.00014
-
 pH and temperature not specified in the publication Staphylococcus aureus 5'-deoxy-2-phenoxyadenosine
6.5.1.2 0.00015
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 2-(pentyloxy)adenosine
6.5.1.2 0.00016
-
 pH and temperature not specified in the publication Staphylococcus aureus 5'-deoxy-2-[(trans-4-methylcyclohexyl)oxy]adenosine
6.5.1.2 0.00017
-
 pH and temperature not specified in the publication Staphylococcus aureus 2-(butylsulfanyl)-5'-deoxyadenosine
6.5.1.2 0.00037
-
 pH and temperature not specified in the publication Staphylococcus aureus 5'-deoxy-5'-fluoro-2-[[1-(hydroxymethyl)cyclopropyl]methoxy]adenosine
6.5.1.2 0.00038
-
 pH and temperature not specified in the publication Staphylococcus aureus 2-(pentylsulfanyl)adenosine
6.5.1.2 0.0004
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 5'-deoxy-5'-fluoro-2-[[1-(hydroxymethyl)cyclopropyl]methoxy]adenosine
6.5.1.2 0.00043
-
 pH and temperature not specified in the publication Staphylococcus aureus 2-(pentyloxy)adenosine
6.5.1.2 0.00044
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 2-(pentylsulfanyl)adenosine
6.5.1.2 0.00267
-
 pH and temperature not specified in the publication Streptococcus pneumoniae 5'-deoxy-2-phenoxyadenosine