EC Number | Cloned (Comment) | Organism |
---|---|---|
1.4.3.3 | expressed in Escherichia coli BL21(DE3) CodonPlus/pLysS cells | Trigonopsis variabilis |
EC Number | Protein Variants | Comment | Organism |
---|---|---|---|
1.4.3.3 | F258A | the improvement of catalytic efficiency with D-Tyr, D-Phe, and D-Leu for mutant enzyme F258A is 3.66, 11.7, and 1.5fold, respectively. The mutant is inactive with D-Ala, D-Ser, D-Lys, and D-Thr, while the activity with D-Tyr, D-Leu and especially with D-Phe significantly increases | Trigonopsis variabilis |
1.4.3.3 | F258S | the improvement of catalytic efficiency with D-Tyr, D-Phe, and D-Leu for mutant enzyme F258S is 1.7, 4.75, and 6.61fold, respectively. The mutant is inactive with D-Ala, D-Ser, D-Lys, and D-Thr, while the activity with D-Tyr, D-Leu and especially with D-Phe significantly increases | Trigonopsis variabilis |
1.4.3.3 | F258Y | the mutant is inactive with D-Val, D-Tyr, D-Ala, D-Ser, D-Lys, and D-Thr | Trigonopsis variabilis |
EC Number | KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
1.4.3.3 | 0.068 | - |
D-Phe | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.087 | - |
D-Tyr | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.134 | - |
D-Phe | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.227 | - |
D-Leu | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.37 | - |
D-Phe | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.45 | - |
D-Trp | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.45 | - |
D-Tyr | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.46 | - |
D-Trp | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.46 | - |
D-Met | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.49 | - |
D-Trp | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.78 | - |
D-Leu | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.84 | - |
D-Tyr | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 1.19 | - |
D-Leu | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 1.68 | - |
D-Phe | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 1.81 | - |
D-Leu | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 2.7 | - |
D-Trp | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 2.9 | - |
D-Met | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 3.3 | - |
D-Met | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 4.2 | - |
D-Met | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 11.1 | - |
D-Thr | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 14.4 | - |
D-Val | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 16.7 | - |
D-Ala | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 22 | - |
D-Asn | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 22.6 | - |
D-Asn | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 29 | - |
D-Asn | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 29.3 | - |
D-Lys | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 36.6 | - |
D-Ser | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 41 | - |
D-Val | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 46 | - |
D-Val | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 50 | - |
D-Asn | Km above 50 mM, mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis |
EC Number | Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|---|
1.4.3.3 | 38000 | - |
x * 38000, SDS-PAGE | Trigonopsis variabilis |
EC Number | Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|---|
1.4.3.3 | D-amino acid + H2O + O2 | Trigonopsis variabilis | - |
2-oxocarboxylate + NH3 + H2O2 | - |
? |
EC Number | Organism | UniProt | Comment | Textmining |
---|---|---|---|---|
1.4.3.3 | Trigonopsis variabilis | - |
- |
- |
EC Number | Purification (Comment) | Organism |
---|---|---|
1.4.3.3 | MonoQ column chromatography and Sephadex G-25 gel filtration | Trigonopsis variabilis |
EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|---|
1.4.3.3 | D-Ala + H2O + O2 | - |
Trigonopsis variabilis | pyruvate + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-amino acid + H2O + O2 | - |
Trigonopsis variabilis | 2-oxocarboxylate + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Asn + H2O + O2 | - |
Trigonopsis variabilis | 2-oxosuccinamate + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Leu + H2O + O2 | - |
Trigonopsis variabilis | 4-methyl-2-oxopentanoic acid + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Lys + H2O + O2 | - |
Trigonopsis variabilis | 6-amino-2-oxohexanoic acid + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Met + H2O + O2 | best substrate | Trigonopsis variabilis | 4-methylthio-2-oxobutanoic acid + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Phe + H2O + O2 | - |
Trigonopsis variabilis | phenylpyruvate + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Ser + H2O + O2 | - |
Trigonopsis variabilis | 2-oxo-3-hydroxypropionic acid + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Thr + H2O + O2 | - |
Trigonopsis variabilis | 2-oxo-3-hydroxybutyrate + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Trp + H2O + O2 | - |
Trigonopsis variabilis | indol-3-pyruvate + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Tyr + H2O + O2 | - |
Trigonopsis variabilis | 4-hydroxyphenylpyruvic acid + NH3 + H2O2 | - |
? | |
1.4.3.3 | D-Val + H2O + O2 | - |
Trigonopsis variabilis | 2-oxoisovalerate + NH3 + H2O2 | - |
? |
EC Number | Subunits | Comment | Organism |
---|---|---|---|
1.4.3.3 | ? | x * 38000, SDS-PAGE | Trigonopsis variabilis |
EC Number | Synonyms | Comment | Organism |
---|---|---|---|
1.4.3.3 | D-amino acid oxidase | - |
Trigonopsis variabilis |
1.4.3.3 | DAAO | - |
Trigonopsis variabilis |
EC Number | Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
1.4.3.3 | 0.7 | - |
D-Asn | Km less than 0.7 s-1, mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 1.75 | - |
D-Thr | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 3.54 | - |
D-Lys | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 7.7 | - |
D-Trp | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 11.5 | - |
D-Val | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 13 | - |
D-Asn | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 14.6 | - |
D-Val | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 15.9 | - |
D-Tyr | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 20.5 | - |
D-Ser | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 22.5 | - |
D-Tyr | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 27.2 | - |
D-Phe | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 29.1 | - |
D-Leu | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 31 | - |
D-Trp | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 33 | - |
D-Trp | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 42 | - |
D-Met | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 42.4 | - |
D-Trp | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 46 | - |
D-Leu | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 47.1 | - |
D-Phe | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 50 | - |
D-Asn | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 56 | - |
D-Leu | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 58.8 | - |
D-Phe | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 62.4 | - |
D-Asn | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 63 | - |
D-Met | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 63 | - |
D-Phe | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 66.6 | - |
D-Leu | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 72 | - |
D-Tyr | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 80.5 | - |
D-Met | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 85.3 | - |
D-Val | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 89 | - |
D-Met | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 108.6 | - |
D-Ala | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis |
EC Number | Cofactor | Comment | Organism | Structure |
---|---|---|---|---|
1.4.3.3 | FAD | - |
Trigonopsis variabilis |
EC Number | kcat/KM Value [1/mMs-1] | kcat/KM Value Maximum [1/mMs-1] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
1.4.3.3 | 0.12 | - |
D-Lys | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.16 | - |
D-Thr | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.25 | - |
D-Val | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.36 | - |
D-Val | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.56 | - |
D-Ser | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 0.59 | - |
D-Asn | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 1.7 | - |
D-Asn | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 2.8 | - |
D-Asn | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 5.9 | - |
D-Val | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 6.5 | - |
D-Ala | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 12 | - |
D-Trp | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 12.7 | - |
D-Met | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 14.8 | - |
D-Asn | Km less than 14.8 mM-1 s-1, mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 17 | - |
D-Trp | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 21 | - |
D-Met | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 22 | - |
D-Met | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 25 | - |
D-Leu | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 37 | - |
D-Phe | mutant enzyme F258Y, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 37.3 | - |
D-Leu | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 50 | - |
D-Tyr | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 56 | - |
D-Leu | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 67.3 | - |
D-Trp | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 73.9 | - |
D-Phe | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 85.8 | - |
D-Tyr | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 86.5 | - |
D-Trp | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 175 | - |
D-Met | wild type enzyme, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 183 | - |
D-Tyr | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 245 | - |
D-Leu | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 351 | - |
D-Phe | mutant enzyme F258S, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis | |
1.4.3.3 | 865 | - |
D-Phe | mutant enzyme F258A, in 50 mM potassium phosphate buffer, pH 8.0, at 30°C | Trigonopsis variabilis |