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Literature summary extracted from

  • Nagae, T.; Kato, C.; Watanabe, N.
    Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1 (2012), Acta Crystallogr. Sect. F, 68, 265-268.
    View publication on PubMedView publication on EuropePMC

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
1.1.1.85 to 1.5 A resolution. Comparison of enzyme structures from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1. The Shewanella benthica enzyme is in a more open form and has a larger internal cavity volume than Shewanella oneidensis IPMDH at atmospheric pressure. The loosely packed structure of Shewanella benthica IPMDH may help it to avoid pressure-induced distortion of the native structure and to remain active at higher pressures than Shewanella oneidensis IPMDH Shewanella benthica
1.1.1.85 to 1.5 A resolution. Comparison of enzyme structures from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1. The Shewanella benthica enzyme is in a more open form and has a larger internal cavity volume than Shewanella oneidensis IPMDH at atmospheric pressure. The loosely packed structure of Shewanella benthica IPMDH may help it to avoid pressure-induced distortion of the native structure and to remain active at higher pressures than Shewanella oneidensis IPMDH Shewanella oneidensis

Organism

EC Number Organism UniProt Comment Textmining
1.1.1.85 Shewanella benthica D2YZL2
-
-
1.1.1.85 Shewanella benthica DB21 MT-2 D2YZL2
-
-
1.1.1.85 Shewanella oneidensis Q8E9N3
-
-
1.1.1.85 Shewanella oneidensis MR-1 / ATCC 700550 Q8E9N3
-
-

Synonyms

EC Number Synonyms Comment Organism
1.1.1.85 IPMDH
-
Shewanella benthica
1.1.1.85 IPMDH
-
Shewanella oneidensis