Literature summary extracted from
Shaik, M.M.; Cendron, L.; Percudani, R.; Zanotti, G.
The structure of Helicobacter pylori HP0310 reveals an atypical peptidoglycan deacetylase (2011), PLoS ONE, 6, e19207.
Cloned(Commentary)
EC Number |
Cloned (Comment) |
Organism |
---|
3.5.1.104 |
expression in Escherichia coli |
Helicobacter pylori |
Crystallization (Commentary)
EC Number |
Crystallization (Comment) |
Organism |
---|
3.5.1.104 |
to 2.57 A resolution. The polypeptide folds into a single domain, characterized by a non-canonical TIM-barrel fold. Nine beta-strands are arranged in a central barrel surrounded by six alpha-helices. Four monomers are present in the asymmetric unit, arranged around a four-fold rotation axis |
Helicobacter pylori |
Organism
EC Number |
Organism |
UniProt |
Comment |
Textmining |
---|
3.5.1.104 |
Helicobacter pylori |
B5ZA76 |
- |
- |
Substrates and Products (Substrate)
EC Number |
Substrates |
Comment Substrates |
Organism |
Products |
Comment (Products) |
Rev. |
Reac. |
---|
3.5.1.104 |
additional information |
no substrates: N-acetyl putrescine, N-acetyl spermidine, N-acetyl cadaverine, and N-acetyl dipeptides Ac-D-Ala-D-Ala-OH, Ac-D-Ala-D-Ala-OCH3, Ac-DAla-L-Ala-OH, Ac-D-Ala-L-Ala-OCH3 |
Helicobacter pylori |
? |
- |
? |
|
Subunits
EC Number |
Subunits |
Comment |
Organism |
---|
3.5.1.104 |
tetramer |
crystallization data and gel filtration |
Helicobacter pylori |
Synonyms
EC Number |
Synonyms |
Comment |
Organism |
---|
3.5.1.104 |
HP0310 |
- |
Helicobacter pylori |
3.5.1.104 |
HpPgdA |
- |
Helicobacter pylori |