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Literature summary extracted from

  • Espie, G.S.; Kimber, M.S.
    Carboxysomes: cyanobacterial RubisCO comes in small packages (2011), Photosynth. Res., 109, 7-20.
    View publication on PubMed

Activating Compound

EC Number Activating Compound Comment Organism Structure
4.1.1.39 additional information the carboxysome shell does not enhance RubisCO activity Halothiobacillus neapolitanus
4.1.1.39 additional information the carboxysome shell does not enhance RubisCO activity Synechococcus sp.
4.1.1.39 additional information the carboxysome shell does not enhance RubisCO activity Synechocystis sp.
4.1.1.39 additional information the carboxysome shell does not enhance RubisCO activity Prochlorococcus marinus

Localization

EC Number Localization Comment Organism GeneOntology No. Textmining
4.1.1.39 carboxysome
-
 Halothiobacillus neapolitanus 31470
-
4.1.1.39 carboxysome
-
 Synechococcus sp. 31470
-
4.1.1.39 carboxysome
-
 Synechocystis sp. 31470
-
4.1.1.39 carboxysome
-
 Prochlorococcus marinus 31470
-

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Halothiobacillus neapolitanus
-
 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Synechococcus sp.
-
 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Synechocystis sp.
-
 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Prochlorococcus marinus
-
 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Synechococcus sp. PCC 7942
-
 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O Prochlorococcus marinus MED4
-
 3-phospho-D-glycerate
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Halothiobacillus neapolitanus
-
-
-
4.1.1.39 Prochlorococcus marinus
-
-
-
4.1.1.39 Prochlorococcus marinus MED4
-
-
-
4.1.1.39 Synechococcus sp.
-
-
-
4.1.1.39 Synechococcus sp. PCC 7942
-
-
-
4.1.1.39 Synechocystis sp.
-
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Halothiobacillus neapolitanus 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Synechococcus sp. 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Synechocystis sp. 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Prochlorococcus marinus 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Synechococcus sp. PCC 7942 3-phospho-D-glycerate
-
 ?
4.1.1.39 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 Prochlorococcus marinus MED4 3-phospho-D-glycerate
-
 ?

Synonyms

EC Number Synonyms Comment Organism
4.1.1.39 Ribulose 1,5-bisphosphate carboxylase/oxygenase
-
 Halothiobacillus neapolitanus
4.1.1.39 Ribulose 1,5-bisphosphate carboxylase/oxygenase
-
 Synechococcus sp.
4.1.1.39 Ribulose 1,5-bisphosphate carboxylase/oxygenase
-
 Synechocystis sp.
4.1.1.39 Ribulose 1,5-bisphosphate carboxylase/oxygenase
-
 Prochlorococcus marinus
4.1.1.39 Rubisco
-
 Halothiobacillus neapolitanus
4.1.1.39 Rubisco
-
 Synechococcus sp.
4.1.1.39 Rubisco
-
 Synechocystis sp.
4.1.1.39 Rubisco
-
 Prochlorococcus marinus

General Information

EC Number General Information Comment Organism
4.1.1.39 physiological function RubisCO is not needed for correct a-carboxysome shell assembly Halothiobacillus neapolitanus
4.1.1.39 physiological function RubisCO is not needed for correct a-carboxysome shell assembly Synechococcus sp.
4.1.1.39 physiological function RubisCO is not needed for correct a-carboxysome shell assembly Synechocystis sp.
4.1.1.39 physiological function RubisCO is not needed for correct a-carboxysome shell assembly Prochlorococcus marinus