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Literature summary extracted from

  • Zubieta, C.; Joseph, R.; Krishna, S.S.; McMullan, D.; Kapoor, M.; Axelrod, H.L.; Miller, M.D.; Abdubek, P.; Acosta, C.; Astakhova, T.; et al
    Identification and structural characterization of heme binding in a novel dye-decolorizing peroxidase, TyrA (2007), Proteins Struct. Funct. Bioinform., 69, 234-243.
    View publication on PubMed

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
1.11.1.19 TyrA in complex with iron protoporphyrin (IX), hanging drop vapor diffusion method, using 0.1 M Tris pH 8.0, 5% (v/v) 2-propanol, 20% (w/v) polyethylene glycol 4000, and 1 mM hemin Shewanella oneidensis MR-1

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
1.11.1.19 0.084
-
 Reactive Blue 5 in 25 mM citrate buffer, pH 3.2, at 25°C Shewanella oneidensis MR-1

Organism

EC Number Organism UniProt Comment Textmining
1.11.1.19 Shewanella oneidensis MR-1 Q8EIU4
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.11.1.19 Reactive Blue 5 + H2O2 + H+
-
 Shewanella oneidensis MR-1 oxidized Reactive Blue 5 + H2O
-
 ?

Subunits

EC Number Subunits Comment Organism
1.11.1.19 homodimer 2 * 000, SDS-PAGE Shewanella oneidensis MR-1

Synonyms

EC Number Synonyms Comment Organism
1.11.1.19 dye-decolorizing peroxidase
-
 Shewanella oneidensis MR-1
1.11.1.19 DyP
-
 Shewanella oneidensis MR-1
1.11.1.19 tyrA
-
 Shewanella oneidensis MR-1

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
1.11.1.19 5.9
-
 Reactive Blue 5 in 25 mM citrate buffer, pH 3.2, at 25°C Shewanella oneidensis MR-1

Cofactor

EC Number Cofactor Comment Organism Structure
1.11.1.19 heme
-
 Shewanella oneidensis MR-1