Literature summary extracted from
Luo, H.B.; Zheng, H.; Zimmerman, M.D.; Chruszcz, M.; Skarina, T.; Egorova, O.; Savchenko, A.; Edwards, A.M.; Minor, W.
Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum (2010), J. Struct. Biol., 169, 304-311.
Cloned(Commentary)
EC Number |
Cloned (Comment) |
Organism |
---|
3.5.1.59 |
the small regulatory subunit is cloned, expressed and purified |
Thermoplasma acidophilum |
Crystallization (Commentary)
EC Number |
Crystallization (Comment) |
Organism |
---|
3.5.1.59 |
structure solved and refined at a resolution of 2.35 A. The enzyme shares a similar fold and a highly conserved C-D-K-catalytic triad, Cys123, Asp9, and Lys90 with the structures of three cysteine hydrolases (PDB codes: 1NBA, 1IM5, and 2HOR). Molecular dynamics simulations of Ta0454/N-carbamoylsarcosine and Ta0454/pyrazinamide complexes are performed to determine the structural basis of the substrate binding pattern for each ligand. The predicted binding free energies suggest that Ta0454 is selective for N-carbamoylsarcosine over pyrazinamide, and zinc ions play an important role in the favorable substrate bound states |
Thermoplasma acidophilum |
Metals/Ions
EC Number |
Metals/Ions |
Comment |
Organism |
Structure |
---|
3.5.1.59 |
Zinc |
zinc ions play an important role in the favorable substrate bound staes |
Thermoplasma acidophilum |
|
Organism
EC Number |
Organism |
UniProt |
Comment |
Textmining |
---|
3.5.1.59 |
Thermoplasma acidophilum |
Q9HKY9 |
- |
- |
Purification (Commentary)
EC Number |
Purification (Comment) |
Organism |
---|
3.5.1.59 |
the small regulatory subunit is cloned, expressed and purified |
Thermoplasma acidophilum |
Substrates and Products (Substrate)
EC Number |
Substrates |
Comment Substrates |
Organism |
Products |
Comment (Products) |
Rev. |
Reac. |
---|
3.5.1.59 |
N-carbamoylsarcosine + H2O |
- |
Thermoplasma acidophilum |
sarcosine + CO2 + NH3 |
- |
? |
|
Synonyms
EC Number |
Synonyms |
Comment |
Organism |
---|
3.5.1.59 |
CSHase |
- |
Thermoplasma acidophilum |
3.5.1.59 |
N-carbamoylsarcosine amidase Ta0454 |
- |
Thermoplasma acidophilum |
General Information
EC Number |
General Information |
Comment |
Organism |
---|
3.5.1.59 |
physiological function |
involved in the degradation of creatinine |
Thermoplasma acidophilum |