BRENDA - Enzyme Database

Molecular genetic analysis of a dimethylsulfoniopropionate lyase that liberates the climate-changing gas dimethylsulfide in several marine alpha-proteobacteria and Rhodobacter sphaeroides

Curson, A.R.; Rogers, R.; Todd, J.D.; Brearley, C.A.; Johnston, A.W.; Environ. Microbiol. 10, 757-767 (2008)

Data extracted from this reference:

Cloned(Commentary)
EC Number
Commentary
Organism
4.4.1.3
expressed in Escherichia coli
Rhodobacter sphaeroides 2.4.1
Engineering
EC Number
Amino acid exchange
Commentary
Organism
4.4.1.3
additional information
Sulfitobacter J443, DddL-mutant has lost its Ddd+ phenotype, showing that this species has no other gene that can substitute for dddL, the wild type produces 385 nmol dimethylsulfide, the mutant produces only 0.7 nmol dimethylsulfide
Sulfitobacter sp. EE-36
Organism
EC Number
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
4.4.1.3
Fulvimarina pelagi
-
-
-
4.4.1.3
Labrenzia aggregata IAM 12614
-
-
-
4.4.1.3
Pseudooceanicola batsensis
-
-
-
4.4.1.3
Rhodobacter sphaeroides 2.4.1
-
-
-
4.4.1.3
Rhodobacter sphaeroides ATCC 17025
-
-
-
4.4.1.3
Rhodobacter sphaeroides ATCC 17029
-
-
-
4.4.1.3
Sulfitobacter sp. EE-36
-
-
-
4.4.1.3
Yoonia vestfoldensis
-
-
-
Substrates and Products (Substrate)
EC Number
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
4.4.1.3
dimethylsulfoniopropionate
-
697645
Sulfitobacter sp. EE-36
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Yoonia vestfoldensis
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Rhodobacter sphaeroides 2.4.1
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Rhodobacter sphaeroides ATCC 17025
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Rhodobacter sphaeroides ATCC 17029
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Fulvimarina pelagi
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Pseudooceanicola batsensis
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Labrenzia aggregata IAM 12614
dimethylsulfide + acrylate
-
-
-
?
Cloned(Commentary) (protein specific)
EC Number
Commentary
Organism
4.4.1.3
expressed in Escherichia coli
Rhodobacter sphaeroides 2.4.1
Engineering (protein specific)
EC Number
Amino acid exchange
Commentary
Organism
4.4.1.3
additional information
Sulfitobacter J443, DddL-mutant has lost its Ddd+ phenotype, showing that this species has no other gene that can substitute for dddL, the wild type produces 385 nmol dimethylsulfide, the mutant produces only 0.7 nmol dimethylsulfide
Sulfitobacter sp. EE-36
Substrates and Products (Substrate) (protein specific)
EC Number
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
4.4.1.3
dimethylsulfoniopropionate
-
697645
Sulfitobacter sp. EE-36
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Yoonia vestfoldensis
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Rhodobacter sphaeroides 2.4.1
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Rhodobacter sphaeroides ATCC 17025
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Rhodobacter sphaeroides ATCC 17029
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Fulvimarina pelagi
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Pseudooceanicola batsensis
dimethylsulfide + acrylate
-
-
-
?
4.4.1.3
dimethylsulfoniopropionate
-
697645
Labrenzia aggregata IAM 12614
dimethylsulfide + acrylate
-
-
-
?