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Literature summary extracted from

  • Andersson, I.; Backlund, A.
    Structure and function of Rubisco (2008), Plant Physiol. Biochem., 46, 275-291.
    View publication on PubMed

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
4.1.1.39
-
 Nicotiana tabacum
4.1.1.39
-
 Rhodopseudomonas palustris
4.1.1.39
-
 Cupriavidus necator
4.1.1.39
-
 Halothiobacillus neapolitanus
4.1.1.39
-
 Synechococcus sp.
4.1.1.39
-
 Chlorobaculum tepidum
4.1.1.39
-
 Thermococcus kodakarensis
4.1.1.39
-
 Galdieria partita
4.1.1.39
-
 Geobacillus kaustophilus
4.1.1.39
-
 Chlamydomonas reinhardtii
4.1.1.39
-
 Rhodospirillum rubrum
4.1.1.39
-
 Pyrococcus horikoshii
4.1.1.39
-
 Spinacia oleracea
4.1.1.39
-
 Oryza sativa

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4.1.1.39 3-phospho-D-glycerate + H+ Nicotiana tabacum
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Rhodopseudomonas palustris
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Cupriavidus necator
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Halothiobacillus neapolitanus
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Synechococcus sp.
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Chlorobaculum tepidum
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Thermococcus kodakarensis
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Galdieria partita
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Geobacillus kaustophilus
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Chlamydomonas reinhardtii
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Rhodospirillum rubrum
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Pyrococcus horikoshii
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Spinacia oleracea
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+ Oryza sativa
-
 D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 D-ribulose 1,5-bisphosphate + O2 Rhodospirillum rubrum
-
 2-phosphoglycolate + 3-phospho-D-glycerate
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
4.1.1.39 Chlamydomonas reinhardtii P08475
-
-
4.1.1.39 Chlorobaculum tepidum
-
-
-
4.1.1.39 Cupriavidus necator
-
-
-
4.1.1.39 Galdieria partita
-
-
-
4.1.1.39 Geobacillus kaustophilus
-
-
-
4.1.1.39 Halothiobacillus neapolitanus
-
-
-
4.1.1.39 Nicotiana tabacum
-
-
-
4.1.1.39 Oryza sativa Q0INY7
-
-
4.1.1.39 Pyrococcus horikoshii O58677
-
-
4.1.1.39 Rhodopseudomonas palustris
-
-
-
4.1.1.39 Rhodospirillum rubrum P04718
-
-
4.1.1.39 Spinacia oleracea O20253
-
-
4.1.1.39 Synechococcus sp.
-
-
-
4.1.1.39 Thermococcus kodakarensis
-
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4.1.1.39 3-phospho-D-glycerate + H+
-
 Nicotiana tabacum D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Rhodopseudomonas palustris D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Cupriavidus necator D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Halothiobacillus neapolitanus D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Synechococcus sp. D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Chlorobaculum tepidum D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Thermococcus kodakarensis D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Galdieria partita D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Geobacillus kaustophilus D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Chlamydomonas reinhardtii D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Rhodospirillum rubrum D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Pyrococcus horikoshii D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Spinacia oleracea D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 3-phospho-D-glycerate + H+
-
 Oryza sativa D-ribulose 1,5-bisphosphate + CO2 + H2O
-
 r
4.1.1.39 D-ribulose 1,5-bisphosphate + O2
-
 Rhodospirillum rubrum 2-phosphoglycolate + 3-phospho-D-glycerate
-
 ?

Subunits

EC Number Subunits Comment Organism
4.1.1.39 multimer catalytic large and small subunit Nicotiana tabacum
4.1.1.39 multimer catalytic large and small subunit Rhodopseudomonas palustris
4.1.1.39 multimer catalytic large and small subunit Cupriavidus necator
4.1.1.39 multimer catalytic large and small subunit Halothiobacillus neapolitanus
4.1.1.39 multimer catalytic large and small subunit Synechococcus sp.
4.1.1.39 multimer catalytic large and small subunit Chlorobaculum tepidum
4.1.1.39 multimer catalytic large and small subunit Thermococcus kodakarensis
4.1.1.39 multimer catalytic large and small subunit Galdieria partita
4.1.1.39 multimer catalytic large and small subunit Geobacillus kaustophilus
4.1.1.39 multimer catalytic large and small subunit Chlamydomonas reinhardtii
4.1.1.39 multimer catalytic large and small subunit Rhodospirillum rubrum
4.1.1.39 multimer catalytic large and small subunit Pyrococcus horikoshii
4.1.1.39 multimer catalytic large and small subunit Spinacia oleracea
4.1.1.39 multimer catalytic large and small subunit Oryza sativa

Synonyms

EC Number Synonyms Comment Organism
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Nicotiana tabacum
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Rhodopseudomonas palustris
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Cupriavidus necator
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Halothiobacillus neapolitanus
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Synechococcus sp.
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Chlorobaculum tepidum
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Thermococcus kodakarensis
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Galdieria partita
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Geobacillus kaustophilus
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Chlamydomonas reinhardtii
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Rhodospirillum rubrum
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Pyrococcus horikoshii
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Spinacia oleracea
4.1.1.39 ribulose-1,5-bisphosphate carboxylase/oxygenase
-
 Oryza sativa
4.1.1.39 Rubisco
-
 Nicotiana tabacum
4.1.1.39 Rubisco
-
 Rhodopseudomonas palustris
4.1.1.39 Rubisco
-
 Cupriavidus necator
4.1.1.39 Rubisco
-
 Halothiobacillus neapolitanus
4.1.1.39 Rubisco
-
 Synechococcus sp.
4.1.1.39 Rubisco
-
 Chlorobaculum tepidum
4.1.1.39 Rubisco
-
 Thermococcus kodakarensis
4.1.1.39 Rubisco
-
 Galdieria partita
4.1.1.39 Rubisco
-
 Geobacillus kaustophilus
4.1.1.39 Rubisco
-
 Chlamydomonas reinhardtii
4.1.1.39 Rubisco
-
 Rhodospirillum rubrum
4.1.1.39 Rubisco
-
 Pyrococcus horikoshii
4.1.1.39 Rubisco
-
 Spinacia oleracea
4.1.1.39 Rubisco
-
 Oryza sativa