EC Number | Crystallization (Comment) | Organism |
---|---|---|
2.5.1.27 | isoform Tzs in complex with AMP and dimethylallyl S-thiodiphosphate. The carbon-nitrogen-based prenylation proceeds by the SN2-reaction mechanism | Agrobacterium tumefaciens |
EC Number | Protein Variants | Comment | Organism |
---|---|---|---|
2.5.1.27 | D173G | decrease in activity with substrate 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Specificity ratio for substrate dimethylallyl diphosphate over 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate is 208 compared with 2.3 for wild-type | Agrobacterium tumefaciens |
2.5.1.27 | E210N | slight decrease in activity with substrate 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Specificity ratio for substrate dimethylallyl diphosphate over 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate is 15 compared with 2.3 for wild-type | Agrobacterium tumefaciens |
2.5.1.27 | E213Q | slight decrease in activity with substrate 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Specificity ratio for substrate dimethylallyl diphosphate over 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate is 5.1 compared with 2.3 for wild-type | Agrobacterium tumefaciens |
2.5.1.27 | H214L | decrease in activity with substrate 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Specificity ratio for substrate dimethylallyl diphosphate over 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate is 1163 compared with 2.3 for wild-type | Agrobacterium tumefaciens |
2.5.1.27 | Y211T | slight decrease in activity with substrate 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Specificity ratio for substrate dimethylallyl diphosphate over 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate is 9 compared with 2.3 for wild-type | Agrobacterium tumefaciens |
EC Number | KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
2.5.1.27 | 0.00023 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant Y211T | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0026 | - |
dimethylallyl diphosphate | mutant D173G | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0042 | - |
dimethylallyl diphosphate | mutant E210N | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0075 | - |
dimethylallyl diphosphate | mutant E213Q | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0079 | - |
dimethylallyl diphosphate | wild-type | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0082 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | wild-type | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0108 | - |
dimethylallyl diphosphate | mutant H214L | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0226 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant D173G | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0261 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant E210N | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0335 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant E213Q | Agrobacterium tumefaciens | |
2.5.1.27 | 0.035 | - |
AMP | wild-type | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0354 | - |
dimethylallyl diphosphate | mutant Y211T | Agrobacterium tumefaciens | |
2.5.1.27 | 0.0805 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant H214L | Agrobacterium tumefaciens |
EC Number | Metals/Ions | Comment | Organism | Structure |
---|---|---|---|---|
2.5.1.27 | Zn2+ | two Zn2+ ions are present in the crystal. One is coordinated with the hydroxyl group of Thr-15. The other is located near AMP and is coordinated to the side chains of Asp-173, Glu-213, and His-214 | Agrobacterium tumefaciens |
EC Number | Organism | UniProt | Comment | Textmining |
---|---|---|---|---|
2.5.1.27 | Agrobacterium tumefaciens | P58758 | isoform Tzs | - |
EC Number | Reaction | Comment | Organism | Reaction ID |
---|---|---|---|---|
2.5.1.27 | dimethylallyl diphosphate + AMP = diphosphate + N6-(dimethylallyl)adenosine 5'-phosphate | the carbon-nitrogen-based prenylation proceeds by the SN2-reaction mechanism | Agrobacterium tumefaciens |
EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|---|
2.5.1.27 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate + AMP | - |
Agrobacterium tumefaciens | diphosphate + N6-(4-hydroxy-3-methyl-2-(E)-butyl)adenosine 5'-phosphate | - |
? | |
2.5.1.27 | dimethylallyl diphosphate + AMP | - |
Agrobacterium tumefaciens | diphosphate + N-(dimethylallyl)adenosine 5'-phosphate | - |
? |
EC Number | Synonyms | Comment | Organism |
---|---|---|---|
2.5.1.27 | Tzs | - |
Agrobacterium tumefaciens |
EC Number | Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|---|
2.5.1.27 | 0.00023 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant Y211T | Agrobacterium tumefaciens | |
2.5.1.27 | 0.00058 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant H214L | Agrobacterium tumefaciens | |
2.5.1.27 | 0.001 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant D173G | Agrobacterium tumefaciens | |
2.5.1.27 | 0.002 | - |
dimethylallyl diphosphate | mutant Y211T | Agrobacterium tumefaciens | |
2.5.1.27 | 0.01 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant E210N | Agrobacterium tumefaciens | |
2.5.1.27 | 0.023 | - |
dimethylallyl diphosphate | mutant D173G | Agrobacterium tumefaciens | |
2.5.1.27 | 0.023 | - |
dimethylallyl diphosphate | mutant E210N | Agrobacterium tumefaciens | |
2.5.1.27 | 0.023 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | mutant E213Q | Agrobacterium tumefaciens | |
2.5.1.27 | 0.025 | - |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | wild-type | Agrobacterium tumefaciens | |
2.5.1.27 | 0.033 | - |
dimethylallyl diphosphate | mutant E213Q | Agrobacterium tumefaciens | |
2.5.1.27 | 0.053 | - |
dimethylallyl diphosphate | wild-type | Agrobacterium tumefaciens | |
2.5.1.27 | 0.09 | - |
dimethylallyl diphosphate | mutant H214L | Agrobacterium tumefaciens |